RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 LINC00614P0C842 121 aa8.51□□□□□ -1.05
SNX6-203ENST00000555416 PRR3P79522 188 aaKnown RBP8.51□□□□□ -1.05
SNX6-203ENST00000555416 PAPPA-AS1Q5QFB9 102 aa8.51□□□□□ -1.05
SNX6-203ENST00000555416 TOMM7Q9P0U1 55 aa8.51□□□□□ -1.05
SNX6-203ENST00000555416 FAT3Q8TDW7 4589 aa8.51□□□□□ -1.05
SNX6-203ENST00000555416 FAM168BA1KXE4 195 aa8.5□□□□□ -1.05
SNX6-203ENST00000555416 TLX1NBP0CAT3 122 aa8.5□□□□□ -1.05
SNX6-203ENST00000555416 HERVK_113P63121 156 aa8.5□□□□□ -1.05
SNX6-203ENST00000555416 GEMIN7Q9H840 131 aaKnown RBP8.5□□□□□ -1.05
SNX6-203ENST00000555416 TINCRA0A1B0GVN0 87 aa8.49□□□□□ -1.05
SNX6-203ENST00000555416 SMIM1B2RUZ4 78 aa8.49□□□□□ -1.05
SNX6-203ENST00000555416 KRTAP7-1Q8IUC3 87 aa8.49□□□□□ -1.05
SNX6-203ENST00000555416 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
SNX6-203ENST00000555416 IGLV5-45A0A087WSX0 123 aa8.48□□□□□ -1.05
SNX6-203ENST00000555416 SEC11AP67812 179 aa8.48□□□□□ -1.05
SNX6-203ENST00000555416 PMVKQ15126 192 aa8.48□□□□□ -1.05
SNX6-203ENST00000555416 GAGE2EQ4V326 116 aa8.48□□□□□ -1.05
SNX6-203ENST00000555416 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
SNX6-203ENST00000555416 PHF5AQ7RTV0 110 aaKnown RBP8.48□□□□□ -1.05
SNX6-203ENST00000555416 Q8IZM0 81 aa8.48□□□□□ -1.05
SNX6-203ENST00000555416 GAGE2DQ9UEU5 116 aa8.48□□□□□ -1.05
SNX6-203ENST00000555416 TRBV30A0A0K0K1B3 111 aa8.47□□□□□ -1.05
SNX6-203ENST00000555416 LINC01549A6NIU2 74 aa8.47□□□□□ -1.05
SNX6-203ENST00000555416 C6orf226Q5I0X4 101 aa8.47□□□□□ -1.05
SNX6-203ENST00000555416 KRTAP11-1Q8IUC1 163 aa8.47□□□□□ -1.05
SNX6-203ENST00000555416 OXTP01178 125 aa8.46□□□□□ -1.06
SNX6-203ENST00000555416 HBDP02042 147 aa8.46□□□□□ -1.06
SNX6-203ENST00000555416 PRSS2P07478 247 aa8.46□□□□□ -1.06
SNX6-203ENST00000555416 SPINK8P0C7L1 97 aa8.46□□□□□ -1.06
SNX6-203ENST00000555416 C9orf129Q5T035 196 aaKnown RBP8.46□□□□□ -1.06
SNX6-203ENST00000555416 PACRGQ96M98 296 aaPredicted RBP8.46□□□□□ -1.06
SNX6-203ENST00000555416 CKS1BP61024 79 aa8.45□□□□□ -1.06
SNX6-203ENST00000555416 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
SNX6-203ENST00000555416 MT1HL1P0DM35 61 aa8.44□□□□□ -1.06
SNX6-203ENST00000555416 IGLC3P0DOY3 106 aa8.44□□□□□ -1.06
SNX6-203ENST00000555416 NDUFA6P56556 154 aa8.44□□□□□ -1.06
SNX6-203ENST00000555416 FAM19A5Q7Z5A7 132 aaPredicted RBP8.44□□□□□ -1.06
SNX6-203ENST00000555416 TRGC2P03986 189 aa8.43□□□□□ -1.06
SNX6-203ENST00000555416 RAB5BP61020 215 aa8.43□□□□□ -1.06
SNX6-203ENST00000555416 COX7B2Q8TF08 81 aa8.43□□□□□ -1.06
SNX6-203ENST00000555416 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
SNX6-203ENST00000555416 F8VRH5 84 aa8.42□□□□□ -1.06
SNX6-203ENST00000555416 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
SNX6-203ENST00000555416 SRSF9Q13242 221 aaKnown RBP eCLIP8.42□□□□□ -1.061e-7■■■■□ 24.7
SNX6-203ENST00000555416 C11orf86A6NJI1 115 aa8.41□□□□□ -1.06
SNX6-203ENST00000555416 LINC00310P59036 64 aa8.41□□□□□ -1.06
SNX6-203ENST00000555416 SERTAD4-AS1Q5TG53 156 aa8.41□□□□□ -1.06
SNX6-203ENST00000555416 BAGE3Q86Y29 109 aa8.41□□□□□ -1.06
SNX6-203ENST00000555416 XAGE1AQ9HD64 81 aa8.41□□□□□ -1.06
SNX6-203ENST00000555416 COLCA2A8K830 154 aa8.4□□□□□ -1.06
SNX6-203ENST00000555416 ATP5LO75964 103 aa8.4□□□□□ -1.06
SNX6-203ENST00000555416 FAM19A2Q8N3H0 131 aa8.4□□□□□ -1.06
SNX6-203ENST00000555416 CHCHD1Q96BP2 118 aaKnown RBP8.4□□□□□ -1.06
SNX6-203ENST00000555416 IGLV5-39A0A0G2JS06 123 aa8.39□□□□□ -1.07
SNX6-203ENST00000555416 M0QXV9 152 aa8.39□□□□□ -1.07
SNX6-203ENST00000555416 LOC100996750A0A140TA64 210 aa8.38□□□□□ -1.07
SNX6-203ENST00000555416 SCO1O75880 301 aa8.38□□□□□ -1.07
SNX6-203ENST00000555416 CXCL5P42830 114 aa8.38□□□□□ -1.07
SNX6-203ENST00000555416 KRTAP4-6Q9BYQ5 205 aa8.38□□□□□ -1.07
SNX6-203ENST00000555416 H3BRM9 83 aa8.37□□□□□ -1.07
SNX6-203ENST00000555416 NUPR1O60356 82 aa8.37□□□□□ -1.07
SNX6-203ENST00000555416 SERF1AO75920 110 aa8.37□□□□□ -1.07
SNX6-203ENST00000555416 C1orf137Q5JT78 98 aa8.37□□□□□ -1.07
SNX6-203ENST00000555416 SPINK6Q6UWN8 80 aa8.37□□□□□ -1.07
SNX6-203ENST00000555416 IFI27L1Q96BM0 104 aa8.37□□□□□ -1.07
SNX6-203ENST00000555416 ODF1Q14990 250 aa8.36□□□□□ -1.07
SNX6-203ENST00000555416 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
SNX6-203ENST00000555416 HSBP1O75506 76 aa8.35□□□□□ -1.07
SNX6-203ENST00000555416 TMEM170BQ5T4T1 132 aa8.35□□□□□ -1.07
SNX6-203ENST00000555416 LINC01600Q96MT4 127 aa8.35□□□□□ -1.07
SNX6-203ENST00000555416 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
SNX6-203ENST00000555416 C22orf24Q9Y442 160 aa8.34□□□□□ -1.07
SNX6-203ENST00000555416 A6NJY4 79 aa8.33□□□□□ -1.08
SNX6-203ENST00000555416 IGLV7-43P04211 117 aa8.33□□□□□ -1.08
SNX6-203ENST00000555416 TMEM223A0PJW6 202 aa8.32□□□□□ -1.08
SNX6-203ENST00000555416 UBE2BP63146 152 aa8.32□□□□□ -1.08
SNX6-203ENST00000555416 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
SNX6-203ENST00000555416 TNXBP22105 4242 aa8.32□□□□□ -1.08
SNX6-203ENST00000555416 H0Y8G0 127 aa8.31□□□□□ -1.08
SNX6-203ENST00000555416 PFN2P35080 140 aa8.31□□□□□ -1.08
SNX6-203ENST00000555416 KRTAP10-8P60410 259 aa8.3□□□□□ -1.08
SNX6-203ENST00000555416 HMCN2Q8NDA2 5059 aa8.29□□□□□ -1.08
SNX6-203ENST00000555416 REG3GQ6UW15 175 aa8.29□□□□□ -1.08
SNX6-203ENST00000555416 MRPL55Q7Z7F7 128 aaKnown RBP8.29□□□□□ -1.08
SNX6-203ENST00000555416 Q8NDZ9 215 aa8.29□□□□□ -1.08
SNX6-203ENST00000555416 ERG28Q9UKR5 140 aa8.29□□□□□ -1.08
SNX6-203ENST00000555416 GAGE10A6NGK3 116 aa8.28□□□□□ -1.08
SNX6-203ENST00000555416 LEPROTL1O95214 131 aa8.28□□□□□ -1.08
SNX6-203ENST00000555416 FABP4P15090 132 aa8.28□□□□□ -1.08
SNX6-203ENST00000555416 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
SNX6-203ENST00000555416 SND1-IT1Q9HBX3 110 aa8.28□□□□□ -1.08
SNX6-203ENST00000555416 TP73-AS1Q9UF72 201 aa8.28□□□□□ -1.08
SNX6-203ENST00000555416 PLA2G2DQ9UNK4 145 aa8.28□□□□□ -1.08
SNX6-203ENST00000555416 RPL37AP8A6NKH3 93 aa8.27□□□□□ -1.09
SNX6-203ENST00000555416 PMCHL2Q9BQD1 86 aa8.27□□□□□ -1.09
SNX6-203ENST00000555416 IGLV5-37A0A075B6J1 123 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 H0Y9J4 135 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST1H2BKO60814 126 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST1H2BJP06899 126 aa8.26□□□□□ -1.09
SNX6-203ENST00000555416 HIST1H2BOP23527 126 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms