RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 UNQ6190/PRO20217Q6UXQ8 127 aa5.03□□□□□ -1.6
SYNE2-216ENST00000555002 Q9UF83 564 aa5.03□□□□□ -1.6
SYNE2-216ENST00000555002 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.03□□□□□ -1.6
SYNE2-216ENST00000555002 ZNF702PQ9H963 129 aa5.03□□□□□ -1.6
SYNE2-216ENST00000555002 TRBV10-3A0A0K0K1G6 114 aa5.03□□□□□ -1.6
SYNE2-216ENST00000555002 COX17Q14061 63 aa5.03□□□□□ -1.6
SYNE2-216ENST00000555002 COL27A1Q8IZC6 1860 aaPredicted RBP5.03□□□□□ -1.6
SYNE2-216ENST00000555002 LINC00694P0DN24 101 aa5.03□□□□□ -1.6
SYNE2-216ENST00000555002 WISP2O76076 250 aa5.02□□□□□ -1.61
SYNE2-216ENST00000555002 SPACA4Q8TDM5 124 aa5.02□□□□□ -1.61
SYNE2-216ENST00000555002 LIMD2Q9BT23 127 aa5.02□□□□□ -1.61
SYNE2-216ENST00000555002 TRBV7-7A0A0K0K1E9 115 aa5.02□□□□□ -1.61
SYNE2-216ENST00000555002 hDV103S1A0JD37 113 aa5.02□□□□□ -1.61
SYNE2-216ENST00000555002 RNASE3P12724 160 aaKnown RBP5.02□□□□□ -1.61
SYNE2-216ENST00000555002 A0A1W2PNU3 283 aaPredicted RBP5.02□□□□□ -1.61
SYNE2-216ENST00000555002 Q6JHZ5 121 aa5.02□□□□□ -1.61
SYNE2-216ENST00000555002 HCG22E2RYF7 251 aa5.02□□□□□ -1.61
SYNE2-216ENST00000555002 COX6A2Q02221 97 aa5.01□□□□□ -1.61
SYNE2-216ENST00000555002 SMIM26A0A096LP01 95 aa5.01□□□□□ -1.61
SYNE2-216ENST00000555002 PRR9Q5T870 116 aa5.01□□□□□ -1.61
SYNE2-216ENST00000555002 MBD6Q96DN6 1003 aa5.01□□□□□ -1.61
SYNE2-216ENST00000555002 LINC01006Q8NI28 216 aa5.01□□□□□ -1.61
SYNE2-216ENST00000555002 RNF185Q96GF1 192 aa5.01□□□□□ -1.61
SYNE2-216ENST00000555002 IGLV8-61A0A075B6I0 122 aa5.01□□□□□ -1.61
SYNE2-216ENST00000555002 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
SYNE2-216ENST00000555002 NTM-AS1Q6ZSK4 140 aa5□□□□□ -1.61
SYNE2-216ENST00000555002 Q8IZM0 81 aa5□□□□□ -1.61
SYNE2-216ENST00000555002 Q8N814 137 aa5□□□□□ -1.61
SYNE2-216ENST00000555002 TRAV7A0A075B6U4 112 aa5□□□□□ -1.61
SYNE2-216ENST00000555002 A0A087WSZ3 146 aa5□□□□□ -1.61
SYNE2-216ENST00000555002 MRGPRG-AS1Q2M3A8 158 aa4.99□□□□□ -1.61
SYNE2-216ENST00000555002 COX7CP15954 63 aa4.99□□□□□ -1.61
SYNE2-216ENST00000555002 CEP295Q9C0D2 2601 aa4.99□□□□□ -1.61
SYNE2-216ENST00000555002 A0A087WYN8 130 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 HECTD1Q9ULT8 2610 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 ATRQ13535 2644 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 SPAG11AQ6PDA7 123 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 MRPS36P82909 103 aaKnown RBP4.98□□□□□ -1.61
SYNE2-216ENST00000555002 C1orf64Q8NEQ6 169 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 COL4A3Q01955 1670 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 EGFEM1PQ0D2K5 195 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 J3QL48 77 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 COX6B2Q6YFQ2 88 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 Q6ZTC4 211 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 MAST4O15021 2626 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 Q6ZS46 218 aa4.98□□□□□ -1.61
SYNE2-216ENST00000555002 CRIP1P50238 77 aa4.97□□□□□ -1.61
SYNE2-216ENST00000555002 FBXL19-AS1Q494R0 122 aa4.97□□□□□ -1.61
SYNE2-216ENST00000555002 PSMG3-AS1Q96PY0 264 aa4.97□□□□□ -1.61
SYNE2-216ENST00000555002 A0A087WVE0 104 aa4.97□□□□□ -1.61
SYNE2-216ENST00000555002 MOBPQ13875 183 aa4.97□□□□□ -1.61
SYNE2-216ENST00000555002 NRACQ8N912 160 aa4.97□□□□□ -1.61
SYNE2-216ENST00000555002 LTBP2Q14767 1821 aa4.97□□□□□ -1.61
SYNE2-216ENST00000555002 ACYP2P14621 99 aa4.96□□□□□ -1.62
SYNE2-216ENST00000555002 EDN2P20800 178 aa4.96□□□□□ -1.62
SYNE2-216ENST00000555002 A0A1B0GU69 56 aa4.96□□□□□ -1.62
SYNE2-216ENST00000555002 A8MTW9 85 aa4.95□□□□□ -1.62
SYNE2-216ENST00000555002 C1orf229Q6ZS94 237 aaPredicted RBP4.95□□□□□ -1.62
SYNE2-216ENST00000555002 CDC42SE2Q9NRR3 84 aa4.95□□□□□ -1.62
SYNE2-216ENST00000555002 LINC00575Q6W349 94 aa4.95□□□□□ -1.62
SYNE2-216ENST00000555002 MGAM2Q2M2H8 2515 aa4.94□□□□□ -1.62
SYNE2-216ENST00000555002 GAS8-AS1O95177 125 aa4.94□□□□□ -1.62
SYNE2-216ENST00000555002 CHTF8P0CG12 524 aa4.94□□□□□ -1.62
SYNE2-216ENST00000555002 FAM229AH3BQW9 127 aa4.93□□□□□ -1.62
SYNE2-216ENST00000555002 Q8N3U1 123 aa4.93□□□□□ -1.62
SYNE2-216ENST00000555002 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
SYNE2-216ENST00000555002 C16orf90A8MZG2 172 aa4.93□□□□□ -1.62
SYNE2-216ENST00000555002 C11orf21Q9P2W6 132 aa4.93□□□□□ -1.62
SYNE2-216ENST00000555002 IGLV4-60A0A075B6I1 120 aa4.92□□□□□ -1.62
SYNE2-216ENST00000555002 C6orf48Q9UBA6 75 aa4.92□□□□□ -1.62
SYNE2-216ENST00000555002 PCSK5Q92824 1860 aa4.92□□□□□ -1.62
SYNE2-216ENST00000555002 SSBP3-AS1Q7Z2R9 100 aa4.92□□□□□ -1.62
SYNE2-216ENST00000555002 KLLNB2CW77 178 aa4.92□□□□□ -1.62
SYNE2-216ENST00000555002 P0C879 139 aa4.92□□□□□ -1.62
SYNE2-216ENST00000555002 FSTL3O95633 263 aa4.92□□□□□ -1.62
SYNE2-216ENST00000555002 C11orf71Q6IPW1 123 aa4.92□□□□□ -1.62
SYNE2-216ENST00000555002 LINC00242Q5T6M2 205 aa4.92□□□□□ -1.62
SYNE2-216ENST00000555002 VPREB1P12018 145 aa4.91□□□□□ -1.62
SYNE2-216ENST00000555002 LINC00574Q9H8X3 128 aa4.91□□□□□ -1.62
SYNE2-216ENST00000555002 ATP11AUNQ6ZP68 121 aa4.91□□□□□ -1.62
SYNE2-216ENST00000555002 SMCR5Q8TEV8 140 aa4.9□□□□□ -1.62
SYNE2-216ENST00000555002 MDFIQ99750 246 aa4.9□□□□□ -1.62
SYNE2-216ENST00000555002 KRTAP10-9P60411 292 aa4.9□□□□□ -1.62
SYNE2-216ENST00000555002 FHL2Q14192 279 aa4.9□□□□□ -1.63
SYNE2-216ENST00000555002 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.63
SYNE2-216ENST00000555002 APLNQ9ULZ1 77 aa4.9□□□□□ -1.63
SYNE2-216ENST00000555002 MUC7Q8TAX7 377 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 IGLV1-40P01703 118 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 C2orf91Q6ZV80 131 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 SMIM29Q86T20 159 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 BRWD1-AS2P59051 145 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 ODF3L2Q3SX64 289 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 TYMSOSQ8TAI1 123 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 CR1P17927 2039 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 C11orf1Q9H5F2 150 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 BPTFQ12830 3046 aa4.89□□□□□ -1.63
SYNE2-216ENST00000555002 SMIM1B2RUZ4 78 aa4.88□□□□□ -1.63
SYNE2-216ENST00000555002 ADAMTSL4-AS1Q5T5F5 129 aa4.88□□□□□ -1.63
SYNE2-216ENST00000555002 LYPD5Q6UWN5 251 aa4.88□□□□□ -1.63
SYNE2-216ENST00000555002 Q96NJ1 140 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms