RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 NCR3O14931 201 aa8.39□□□□□ -1.07
XRCC3-208ENST00000554811 C9orf116Q5BN46 136 aaPredicted RBP8.39□□□□□ -1.07
XRCC3-208ENST00000554811 TRBV6-8A0A0A6YYG3 113 aa8.38□□□□□ -1.07
XRCC3-208ENST00000554811 A0A087WYN8 130 aa8.38□□□□□ -1.07
XRCC3-208ENST00000554811 SMIM11BQ8TCY0 68 aa8.38□□□□□ -1.07
XRCC3-208ENST00000554811 TRAV13-2A0A0B4J235 113 aa8.38□□□□□ -1.07
XRCC3-208ENST00000554811 SS18Q15532 418 aa8.38□□□□□ -1.07
XRCC3-208ENST00000554811 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
XRCC3-208ENST00000554811 CCL18P55774 89 aa8.37□□□□□ -1.07
XRCC3-208ENST00000554811 LINC00269Q8N2A0 174 aa8.37□□□□□ -1.07
XRCC3-208ENST00000554811 FSHBP01225 129 aa8.36□□□□□ -1.07
XRCC3-208ENST00000554811 TMEM86BQ8N661 226 aa8.36□□□□□ -1.07
XRCC3-208ENST00000554811 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
XRCC3-208ENST00000554811 FAM222AQ5U5X8 452 aa8.36□□□□□ -1.07
XRCC3-208ENST00000554811 TENM4Q6N022 2769 aa8.35□□□□□ -1.07
XRCC3-208ENST00000554811 TIMM17BO60830 172 aa8.35□□□□□ -1.07
XRCC3-208ENST00000554811 S100A7L2Q5SY68 101 aa8.35□□□□□ -1.07
XRCC3-208ENST00000554811 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
XRCC3-208ENST00000554811 SEC61GP60059 68 aa8.35□□□□□ -1.07
XRCC3-208ENST00000554811 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
XRCC3-208ENST00000554811 COL6A5A8TX70 2615 aa8.34□□□□□ -1.07
XRCC3-208ENST00000554811 C9orf153Q5TBE3 101 aa8.34□□□□□ -1.07
XRCC3-208ENST00000554811 KLK5Q9Y337 293 aaPredicted RBP8.34□□□□□ -1.07
XRCC3-208ENST00000554811 GIG44P09565 113 aaPredicted RBP8.34□□□□□ -1.07
XRCC3-208ENST00000554811 NHLRC4P0CG21 123 aaPredicted RBP8.34□□□□□ -1.07
XRCC3-208ENST00000554811 A8MTW9 85 aa8.33□□□□□ -1.08
XRCC3-208ENST00000554811 FHL2Q14192 279 aa8.33□□□□□ -1.08
XRCC3-208ENST00000554811 LINC00959A0A1B0GUT2 108 aa8.33□□□□□ -1.08
XRCC3-208ENST00000554811 DAD1P61803 113 aa8.33□□□□□ -1.08
XRCC3-208ENST00000554811 IGLV5-45A0A087WSX0 123 aa8.32□□□□□ -1.08
XRCC3-208ENST00000554811 TRBV6-4A0A1B0GX49 114 aa8.32□□□□□ -1.08
XRCC3-208ENST00000554811 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
XRCC3-208ENST00000554811 TENM1Q9UKZ4 2725 aa8.32□□□□□ -1.08
XRCC3-208ENST00000554811 A0A087WVE0 104 aa8.32□□□□□ -1.08
XRCC3-208ENST00000554811 INAFM2P0DMQ5 153 aa8.32□□□□□ -1.08
XRCC3-208ENST00000554811 WFDC9Q8NEX5 89 aa8.32□□□□□ -1.08
XRCC3-208ENST00000554811 C9orf129Q5T035 196 aaKnown RBP8.31□□□□□ -1.08
XRCC3-208ENST00000554811 SMCR5Q8TEV8 140 aa8.31□□□□□ -1.08
XRCC3-208ENST00000554811 IGKV2-28A0A075B6P5 120 aa8.3□□□□□ -1.08
XRCC3-208ENST00000554811 IGKV2D-28P01615 120 aa8.3□□□□□ -1.08
XRCC3-208ENST00000554811 IGLV1-51P01701 117 aa8.3□□□□□ -1.08
XRCC3-208ENST00000554811 KLK12Q9UKR0 248 aa8.3□□□□□ -1.08
XRCC3-208ENST00000554811 LAMTOR3Q9UHA4 124 aa8.3□□□□□ -1.08
XRCC3-208ENST00000554811 AKAP9Q99996 3911 aa8.3□□□□□ -1.08
XRCC3-208ENST00000554811 PDZD2O15018 2839 aa8.29□□□□□ -1.08
XRCC3-208ENST00000554811 SPATA3Q8NHX4 192 aa8.29□□□□□ -1.08
XRCC3-208ENST00000554811 IGHV3OR16-9A0A0B4J2B5 98 aa8.28□□□□□ -1.08
XRCC3-208ENST00000554811 XAGE1AQ9HD64 81 aa8.28□□□□□ -1.08
XRCC3-208ENST00000554811 PLAC8L1A1L4L8 177 aa8.28□□□□□ -1.08
XRCC3-208ENST00000554811 TRACP01848 142 aa8.28□□□□□ -1.08
XRCC3-208ENST00000554811 CMC4P56277 68 aaPredicted RBP8.28□□□□□ -1.08
XRCC3-208ENST00000554811 CHCHD10Q8WYQ3 142 aaPredicted RBP8.28□□□□□ -1.08
XRCC3-208ENST00000554811 INAFM1C9JVW0 142 aa8.28□□□□□ -1.08
XRCC3-208ENST00000554811 C6orf223Q8N319 242 aa8.28□□□□□ -1.08
XRCC3-208ENST00000554811 PRO0255Q9UI72 69 aa8.28□□□□□ -1.08
XRCC3-208ENST00000554811 KRTAP1-3Q8IUG1 177 aa8.27□□□□□ -1.08
XRCC3-208ENST00000554811 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.09
XRCC3-208ENST00000554811 LRRC75A-AS1Q8N1F1 130 aa8.27□□□□□ -1.09
XRCC3-208ENST00000554811 ORMDL1Q9P0S3 153 aa8.27□□□□□ -1.09
XRCC3-208ENST00000554811 LINC00643Q86TS7 51 aa8.26□□□□□ -1.09
XRCC3-208ENST00000554811 CXCL5P42830 114 aa8.26□□□□□ -1.09
XRCC3-208ENST00000554811 REG3AQ06141 175 aa8.26□□□□□ -1.09
XRCC3-208ENST00000554811 C6orf99Q4VX62 202 aa8.26□□□□□ -1.09
XRCC3-208ENST00000554811 IBA57-AS1B1ANH7 110 aa8.26□□□□□ -1.09
XRCC3-208ENST00000554811 BAHCC1Q9P281 2608 aa8.26□□□□□ -1.09
XRCC3-208ENST00000554811 A0A087WZ39 114 aa8.25□□□□□ -1.09
XRCC3-208ENST00000554811 HIGD2BQ4VC39 106 aa8.25□□□□□ -1.09
XRCC3-208ENST00000554811 A0A1B0GX51 115 aa8.25□□□□□ -1.09
XRCC3-208ENST00000554811 V9GYY9 64 aa8.25□□□□□ -1.09
XRCC3-208ENST00000554811 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
XRCC3-208ENST00000554811 UNQ6190/PRO20217Q6UXQ8 127 aa8.24□□□□□ -1.09
XRCC3-208ENST00000554811 ACYP1P07311 99 aa8.24□□□□□ -1.09
XRCC3-208ENST00000554811 HAMPP81172 84 aa8.24□□□□□ -1.09
XRCC3-208ENST00000554811 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
XRCC3-208ENST00000554811 RETNQ9HD89 108 aa8.24□□□□□ -1.09
XRCC3-208ENST00000554811 H0YGX0 51 aa8.23□□□□□ -1.09
XRCC3-208ENST00000554811 DEFB121Q5J5C9 76 aa8.23□□□□□ -1.09
XRCC3-208ENST00000554811 MRAPQ8TCY5 172 aa8.23□□□□□ -1.09
XRCC3-208ENST00000554811 LINC00846Q9NV44 126 aa8.23□□□□□ -1.09
XRCC3-208ENST00000554811 IGHV4-28A0A0C4DH34 117 aa8.23□□□□□ -1.09
XRCC3-208ENST00000554811 OTOGQ6ZRI0 2925 aa8.23□□□□□ -1.09
XRCC3-208ENST00000554811 J3KT08 172 aa8.23□□□□□ -1.09
XRCC3-208ENST00000554811 IL17DQ8TAD2 202 aa8.23□□□□□ -1.09
XRCC3-208ENST00000554811 C19orf73Q9NVV2 129 aa8.23□□□□□ -1.09
XRCC3-208ENST00000554811 TRAV23DV6A0A075B6W5 121 aa8.22□□□□□ -1.09
XRCC3-208ENST00000554811 C4orf26Q17RF5 130 aa8.22□□□□□ -1.09
XRCC3-208ENST00000554811 hADV29S1A0JD25 119 aa8.22□□□□□ -1.09
XRCC3-208ENST00000554811 CSNK1G2-AS1Q8NCQ2 148 aa8.22□□□□□ -1.09
XRCC3-208ENST00000554811 CELA1Q9UNI1 258 aa8.22□□□□□ -1.09
XRCC3-208ENST00000554811 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.09
XRCC3-208ENST00000554811 OVOL2Q9BRP0 275 aa8.21□□□□□ -1.1
XRCC3-208ENST00000554811 NSD1Q96L73 2696 aaPredicted RBP8.21□□□□□ -1.1
XRCC3-208ENST00000554811 PKD1L1Q8TDX9 2849 aa8.2□□□□□ -1.1
XRCC3-208ENST00000554811 C10orf25Q5T742 122 aa8.2□□□□□ -1.1
XRCC3-208ENST00000554811 SCXQ7RTU7 201 aa8.2□□□□□ -1.1
XRCC3-208ENST00000554811 HILS1P60008 231 aa8.19□□□□□ -1.1
XRCC3-208ENST00000554811 LY6G6DO95868 133 aa8.19□□□□□ -1.1
XRCC3-208ENST00000554811 KRTAP10-3P60369 221 aa8.19□□□□□ -1.1
XRCC3-208ENST00000554811 Q6Q795 121 aa8.19□□□□□ -1.1
XRCC3-208ENST00000554811 PRB2P02812 416 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms