RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 C1orf137Q5JT78 98 aa10.02□□□□□ -0.81
VTI1B-204ENST00000554659 ESRGQ1W209 222 aa10.02□□□□□ -0.81
VTI1B-204ENST00000554659 BEAN1Q3B7T3 259 aa10.01□□□□□ -0.81
VTI1B-204ENST00000554659 M0R2N4 97 aa10.01□□□□□ -0.81
VTI1B-204ENST00000554659 LY6G6DO95868 133 aa10.01□□□□□ -0.81
VTI1B-204ENST00000554659 TRBV10-3A0A0K0K1G6 114 aa10.01□□□□□ -0.81
VTI1B-204ENST00000554659 C9orf116Q5BN46 136 aaPredicted RBP10□□□□□ -0.81
VTI1B-204ENST00000554659 COL5A1P20908 1838 aaPredicted RBP10□□□□□ -0.81
VTI1B-204ENST00000554659 TRBV7-7A0A0K0K1E9 115 aa10□□□□□ -0.81
VTI1B-204ENST00000554659 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
VTI1B-204ENST00000554659 PRR3P79522 188 aaKnown RBP10□□□□□ -0.81
VTI1B-204ENST00000554659 C10orf25Q5T742 122 aa10□□□□□ -0.81
VTI1B-204ENST00000554659 CPAMD8Q8IZJ3 1885 aa10□□□□□ -0.81
VTI1B-204ENST00000554659 IGLV4-60A0A075B6I1 120 aa10□□□□□ -0.81
VTI1B-204ENST00000554659 LINC01546A6NGU7 62 aa9.99□□□□□ -0.81
VTI1B-204ENST00000554659 IGLV1-51P01701 117 aa9.98□□□□□ -0.81
VTI1B-204ENST00000554659 RETNQ9HD89 108 aa9.98□□□□□ -0.81
VTI1B-204ENST00000554659 FHL2Q14192 279 aa9.98□□□□□ -0.81
VTI1B-204ENST00000554659 PCOTHQ58A44 107 aa9.97□□□□□ -0.81
VTI1B-204ENST00000554659 LINC00474Q9P2X8 69 aa9.95□□□□□ -0.82
VTI1B-204ENST00000554659 LINC00575Q6W349 94 aa9.95□□□□□ -0.82
VTI1B-204ENST00000554659 Q6ZSN1 163 aa9.95□□□□□ -0.82
VTI1B-204ENST00000554659 MUC4Q99102 2169 aa9.95□□□□□ -0.82
VTI1B-204ENST00000554659 IGHV6-1A0A0B4J1U7 121 aa9.94□□□□□ -0.82
VTI1B-204ENST00000554659 KIF25-AS1Q9Y6Z4 181 aa9.94□□□□□ -0.82
VTI1B-204ENST00000554659 A0A1B0GUV1 79 aa9.94□□□□□ -0.82
VTI1B-204ENST00000554659 LINC01561Q8N1V8 128 aa9.94□□□□□ -0.82
VTI1B-204ENST00000554659 TMEM254Q8TBM7 123 aa9.93□□□□□ -0.82
VTI1B-204ENST00000554659 ZNF462Q96JM2 2506 aa9.93□□□□□ -0.82
VTI1B-204ENST00000554659 A0A1W2PPR1 153 aa9.92□□□□□ -0.82
VTI1B-204ENST00000554659 C6orf223Q8N319 242 aa9.92□□□□□ -0.82
VTI1B-204ENST00000554659 CDIP1Q9H305 208 aa9.92□□□□□ -0.82
VTI1B-204ENST00000554659 SPINK1P00995 79 aa9.91□□□□□ -0.82
VTI1B-204ENST00000554659 F8WDY8 70 aa9.91□□□□□ -0.82
VTI1B-204ENST00000554659 X6R8D5 127 aa9.91□□□□□ -0.82
VTI1B-204ENST00000554659 LINC00846Q9NV44 126 aa9.91□□□□□ -0.82
VTI1B-204ENST00000554659 REG3GQ6UW15 175 aa9.9□□□□□ -0.82
VTI1B-204ENST00000554659 CIRBP-AS1Q8TBR5 109 aa9.9□□□□□ -0.82
VTI1B-204ENST00000554659 RETNLBQ9BQ08 111 aa9.9□□□□□ -0.82
VTI1B-204ENST00000554659 A0A087WSZ3 146 aa9.9□□□□□ -0.82
VTI1B-204ENST00000554659 H0Y9P7 68 aa9.9□□□□□ -0.82
VTI1B-204ENST00000554659 DEFB116Q30KQ4 102 aa9.89□□□□□ -0.83
VTI1B-204ENST00000554659 C16orf95Q9H693 158 aa9.88□□□□□ -0.83
VTI1B-204ENST00000554659 CRYGAP11844 174 aa9.88□□□□□ -0.83
VTI1B-204ENST00000554659 PIEZO2Q9H5I5 2752 aa9.88□□□□□ -0.83
VTI1B-204ENST00000554659 IGLV5-39A0A0G2JS06 123 aa9.88□□□□□ -0.83
VTI1B-204ENST00000554659 LINC00337Q8N6G1 96 aa9.87□□□□□ -0.83
VTI1B-204ENST00000554659 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
VTI1B-204ENST00000554659 LY6G6CO95867 125 aa9.86□□□□□ -0.83
VTI1B-204ENST00000554659 Q9BRP9 147 aa9.86□□□□□ -0.83
VTI1B-204ENST00000554659 OXLD1Q5BKU9 147 aa9.86□□□□□ -0.83
VTI1B-204ENST00000554659 RAI1Q7Z5J4 1906 aaPredicted RBP9.86□□□□□ -0.83
VTI1B-204ENST00000554659 A8MTW9 85 aa9.85□□□□□ -0.83
VTI1B-204ENST00000554659 LINC00315P59091 139 aa9.84□□□□□ -0.83
VTI1B-204ENST00000554659 FAM19A4Q96LR4 140 aa9.84□□□□□ -0.83
VTI1B-204ENST00000554659 EXPH5Q8NEV8 1989 aa9.84□□□□□ -0.83
VTI1B-204ENST00000554659 KRTAP10-9P60411 292 aa9.84□□□□□ -0.83
VTI1B-204ENST00000554659 TLN2Q9Y4G6 2542 aa9.84□□□□□ -0.84
VTI1B-204ENST00000554659 C11orf72Q8NBR9 251 aa9.83□□□□□ -0.84
VTI1B-204ENST00000554659 HCG22E2RYF7 251 aa9.83□□□□□ -0.84
VTI1B-204ENST00000554659 JMJD1CQ15652 2540 aa9.83□□□□□ -0.84
VTI1B-204ENST00000554659 PRO0628Q9UI54 55 aa9.82□□□□□ -0.84
VTI1B-204ENST00000554659 hDV103S1A0JD37 113 aa9.81□□□□□ -0.84
VTI1B-204ENST00000554659 CXCL6P80162 114 aa9.81□□□□□ -0.84
VTI1B-204ENST00000554659 Q6ZTC4 211 aa9.81□□□□□ -0.84
VTI1B-204ENST00000554659 SMCPP49901 116 aaPredicted RBP9.81□□□□□ -0.84
VTI1B-204ENST00000554659 IGF2RP11717 2491 aa9.81□□□□□ -0.84
VTI1B-204ENST00000554659 SBSPONQ8IVN8 264 aa9.81□□□□□ -0.84
VTI1B-204ENST00000554659 ADAMTS20P59510 1910 aa9.8□□□□□ -0.84
VTI1B-204ENST00000554659 Q9UF83 564 aa9.8□□□□□ -0.84
VTI1B-204ENST00000554659 PRO0461Q9UI25 63 aa9.8□□□□□ -0.84
VTI1B-204ENST00000554659 LYPD5Q6UWN5 251 aa9.8□□□□□ -0.84
VTI1B-204ENST00000554659 NCOR2Q9Y618 2525 aa9.79□□□□□ -0.84
VTI1B-204ENST00000554659 PCNTO95613 3336 aa9.79□□□□□ -0.84
VTI1B-204ENST00000554659 AGRNO00468 2067 aa9.78□□□□□ -0.84
VTI1B-204ENST00000554659 IGLV5-45A0A087WSX0 123 aa9.78□□□□□ -0.84
VTI1B-204ENST00000554659 C1orf64Q8NEQ6 169 aa9.78□□□□□ -0.84
VTI1B-204ENST00000554659 IGHV3OR16-9A0A0B4J2B5 98 aa9.78□□□□□ -0.84
VTI1B-204ENST00000554659 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
VTI1B-204ENST00000554659 F8P00451 2351 aa9.77□□□□□ -0.84
VTI1B-204ENST00000554659 SMR3AQ99954 134 aa9.77□□□□□ -0.85
VTI1B-204ENST00000554659 LIMD2Q9BT23 127 aa9.77□□□□□ -0.85
VTI1B-204ENST00000554659 TLN1Q9Y490 2541 aaKnown RBP9.76□□□□□ -0.85
VTI1B-204ENST00000554659 PLA2G2AP14555 144 aa9.76□□□□□ -0.85
VTI1B-204ENST00000554659 Q6ZRU5 148 aa9.76□□□□□ -0.85
VTI1B-204ENST00000554659 Q8N2B8 174 aa9.75□□□□□ -0.85
VTI1B-204ENST00000554659 FN1P02751 2386 aaKnown RBP9.75□□□□□ -0.85
VTI1B-204ENST00000554659 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
VTI1B-204ENST00000554659 SMIM29Q86T20 159 aa9.75□□□□□ -0.85
VTI1B-204ENST00000554659 PRLHP81277 87 aa9.74□□□□□ -0.85
VTI1B-204ENST00000554659 BCE1O60756 84 aa9.73□□□□□ -0.85
VTI1B-204ENST00000554659 SETD2Q9BYW2 2564 aaPredicted RBP9.73□□□□□ -0.85
VTI1B-204ENST00000554659 TET2Q6N021 2002 aaPredicted RBP9.73□□□□□ -0.85
VTI1B-204ENST00000554659 ABCA12Q86UK0 2595 aa9.73□□□□□ -0.85
VTI1B-204ENST00000554659 C4orf26Q17RF5 130 aa9.72□□□□□ -0.85
VTI1B-204ENST00000554659 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
VTI1B-204ENST00000554659 ZFYVE26Q68DK2 2539 aa9.71□□□□□ -0.85
VTI1B-204ENST00000554659 IGLV5-52A0A0A0MRZ9 124 aa9.71□□□□□ -0.85
VTI1B-204ENST00000554659 IGKV2D-30A0A075B6S6 120 aa9.71□□□□□ -0.86
VTI1B-204ENST00000554659 IGKV2-30P06310 120 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms