RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 C6orf226Q5I0X4 101 aa10.12□□□□□ -0.79
ACTN1-211ENST00000553882 NSD1Q96L73 2696 aaPredicted RBP10.12□□□□□ -0.79
ACTN1-211ENST00000553882 DEFB121Q5J5C9 76 aa10.12□□□□□ -0.79
ACTN1-211ENST00000553882 FAM222AQ5U5X8 452 aa10.11□□□□□ -0.79
ACTN1-211ENST00000553882 TRACP01848 142 aa10.11□□□□□ -0.79
ACTN1-211ENST00000553882 PAX4O43316 350 aa10.1□□□□□ -0.79
ACTN1-211ENST00000553882 DEFB135Q30KP9 77 aa10.1□□□□□ -0.79
ACTN1-211ENST00000553882 SMIM11BQ8TCY0 68 aa10.1□□□□□ -0.79
ACTN1-211ENST00000553882 IBA57-AS1B1ANH7 110 aa10.1□□□□□ -0.79
ACTN1-211ENST00000553882 RPL28P46779 137 aaKnown RBP10.1□□□□□ -0.79
ACTN1-211ENST00000553882 Q8N3U1 123 aa10.1□□□□□ -0.79
ACTN1-211ENST00000553882 LINC00612Q8N6U2 182 aa10.1□□□□□ -0.79
ACTN1-211ENST00000553882 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
ACTN1-211ENST00000553882 FAM240AA0A1B0GVK7 77 aa10.09□□□□□ -0.79
ACTN1-211ENST00000553882 NDUFV3P56181 108 aaKnown RBP10.09□□□□□ -0.79
ACTN1-211ENST00000553882 NHLRC4P0CG21 123 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-211ENST00000553882 C22orf24Q9Y442 160 aa10.09□□□□□ -0.79
ACTN1-211ENST00000553882 KMT2BQ9UMN6 2715 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-211ENST00000553882 A0A087WYN8 130 aa10.08□□□□□ -0.8
ACTN1-211ENST00000553882 OR13C6PQ8NH95 151 aa10.08□□□□□ -0.8
ACTN1-211ENST00000553882 SS18Q15532 418 aa10.08□□□□□ -0.8
ACTN1-211ENST00000553882 IGLV10-54A0A075B6I4 117 aa10.07□□□□□ -0.8
ACTN1-211ENST00000553882 LY6G6DO95868 133 aa10.07□□□□□ -0.8
ACTN1-211ENST00000553882 ATP5G1P05496 136 aa10.07□□□□□ -0.8
ACTN1-211ENST00000553882 C5orf47Q569G3 176 aa10.07□□□□□ -0.8
ACTN1-211ENST00000553882 PPDPFQ9H3Y8 114 aa10.07□□□□□ -0.8
ACTN1-211ENST00000553882 WIPF1O43516 503 aa10.07□□□□□ -0.8
ACTN1-211ENST00000553882 LINC00269Q8N2A0 174 aa10.06□□□□□ -0.8
ACTN1-211ENST00000553882 A0A1B0GUV1 79 aa10.06□□□□□ -0.8
ACTN1-211ENST00000553882 DNAL4O96015 105 aa10.05□□□□□ -0.8
ACTN1-211ENST00000553882 TEP1Q99973 2627 aaKnown RBP10.05□□□□□ -0.8
ACTN1-211ENST00000553882 MALP21145 153 aa10.04□□□□□ -0.8
ACTN1-211ENST00000553882 SMCR5Q8TEV8 140 aa10.04□□□□□ -0.8
ACTN1-211ENST00000553882 SS18L2Q9UHA2 77 aa10.04□□□□□ -0.8
ACTN1-211ENST00000553882 INAFM1C9JVW0 142 aa10.04□□□□□ -0.8
ACTN1-211ENST00000553882 Q6Q795 121 aa10.04□□□□□ -0.8
ACTN1-211ENST00000553882 HIVEP1P15822 2718 aa10.04□□□□□ -0.8
ACTN1-211ENST00000553882 SMIM9A6NGZ8 99 aa10.03□□□□□ -0.8
ACTN1-211ENST00000553882 ANGP03950 147 aaKnown RBP10.03□□□□□ -0.8
ACTN1-211ENST00000553882 C9orf129Q5T035 196 aaKnown RBP10.03□□□□□ -0.8
ACTN1-211ENST00000553882 PRR3P79522 188 aaKnown RBP10.03□□□□□ -0.8
ACTN1-211ENST00000553882 LECT2O14960 151 aa10.03□□□□□ -0.8
ACTN1-211ENST00000553882 Q8IZM0 81 aa10.03□□□□□ -0.8
ACTN1-211ENST00000553882 IGHV4-28A0A0C4DH34 117 aa10.02□□□□□ -0.81
ACTN1-211ENST00000553882 GAGE2AQ6NT46 116 aa10.02□□□□□ -0.81
ACTN1-211ENST00000553882 HTN3P15516 51 aa10.02□□□□□ -0.81
ACTN1-211ENST00000553882 MRPL23Q16540 153 aaKnown RBP10.02□□□□□ -0.81
ACTN1-211ENST00000553882 C9orf66Q5T8R8 295 aa10.02□□□□□ -0.81
ACTN1-211ENST00000553882 CELA1Q9UNI1 258 aa10.02□□□□□ -0.81
ACTN1-211ENST00000553882 LYRM9A8MSI8 78 aa10.01□□□□□ -0.81
ACTN1-211ENST00000553882 SLPIP03973 132 aa10.01□□□□□ -0.81
ACTN1-211ENST00000553882 DAD1P61803 113 aa10.01□□□□□ -0.81
ACTN1-211ENST00000553882 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-211ENST00000553882 B5MCH6 92 aa10.01□□□□□ -0.81
ACTN1-211ENST00000553882 ACYP1P07311 99 aa10.01□□□□□ -0.81
ACTN1-211ENST00000553882 CHCHD10Q8WYQ3 142 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-211ENST00000553882 CCDC179H3BU77 68 aa10□□□□□ -0.81
ACTN1-211ENST00000553882 REG3AQ06141 175 aa10□□□□□ -0.81
ACTN1-211ENST00000553882 SMIM20Q8N5G0 67 aa9.99□□□□□ -0.81
ACTN1-211ENST00000553882 C14orf132Q9NPU4 83 aa9.99□□□□□ -0.81
ACTN1-211ENST00000553882 H0YGX0 51 aa9.99□□□□□ -0.81
ACTN1-211ENST00000553882 INAFM2P0DMQ5 153 aa9.99□□□□□ -0.81
ACTN1-211ENST00000553882 CD164L2Q6UWJ8 174 aa9.99□□□□□ -0.81
ACTN1-211ENST00000553882 TRBV7-7A0A0K0K1E9 115 aa9.98□□□□□ -0.81
ACTN1-211ENST00000553882 KIAA0087Q14695 138 aa9.98□□□□□ -0.81
ACTN1-211ENST00000553882 LINC00526Q96FQ7 95 aa9.97□□□□□ -0.81
ACTN1-211ENST00000553882 APOC4P55056 127 aa9.97□□□□□ -0.81
ACTN1-211ENST00000553882 PKD1L1Q8TDX9 2849 aa9.96□□□□□ -0.82
ACTN1-211ENST00000553882 NCR3O14931 201 aa9.96□□□□□ -0.82
ACTN1-211ENST00000553882 FAM236AA0A1B0GUQ0 79 aa9.95□□□□□ -0.82
ACTN1-211ENST00000553882 FAM236BA0A1B0GV22 79 aa9.95□□□□□ -0.82
ACTN1-211ENST00000553882 Q8NAQ8 132 aa9.95□□□□□ -0.82
ACTN1-211ENST00000553882 LINC00643Q86TS7 51 aa9.95□□□□□ -0.82
ACTN1-211ENST00000553882 NANOS2P60321 138 aaKnown RBP9.94□□□□□ -0.82
ACTN1-211ENST00000553882 C6orf223Q8N319 242 aa9.94□□□□□ -0.82
ACTN1-211ENST00000553882 Q8NDZ9 215 aa9.93□□□□□ -0.82
ACTN1-211ENST00000553882 C10orf25Q5T742 122 aa9.92□□□□□ -0.82
ACTN1-211ENST00000553882 LINC01561Q8N1V8 128 aa9.92□□□□□ -0.82
ACTN1-211ENST00000553882 SDIM1Q6ZPB5 146 aa9.91□□□□□ -0.82
ACTN1-211ENST00000553882 KLK12Q9UKR0 248 aa9.91□□□□□ -0.82
ACTN1-211ENST00000553882 MIFP14174 115 aa9.91□□□□□ -0.82
ACTN1-211ENST00000553882 UNQ6190/PRO20217Q6UXQ8 127 aa9.91□□□□□ -0.82
ACTN1-211ENST00000553882 C1orf43Q9BWL3 253 aa9.91□□□□□ -0.82
ACTN1-211ENST00000553882 ORMDL1Q9P0S3 153 aa9.91□□□□□ -0.82
ACTN1-211ENST00000553882 SPART-AS1P0CW21 52 aa9.9□□□□□ -0.82
ACTN1-211ENST00000553882 IGHV4-30-4P0DP06 118 aa9.9□□□□□ -0.82
ACTN1-211ENST00000553882 CXCL5P42830 114 aa9.9□□□□□ -0.82
ACTN1-211ENST00000553882 ANK2Q01484 3957 aa9.9□□□□□ -0.82
ACTN1-211ENST00000553882 SEC61GP60059 68 aa9.9□□□□□ -0.82
ACTN1-211ENST00000553882 COX17Q14061 63 aa9.9□□□□□ -0.82
ACTN1-211ENST00000553882 IMUPQ9GZP8 106 aa9.89□□□□□ -0.83
ACTN1-211ENST00000553882 SPAG11BQ08648 103 aa9.89□□□□□ -0.83
ACTN1-211ENST00000553882 TMEM126AQ9H061 195 aa9.89□□□□□ -0.83
ACTN1-211ENST00000553882 KLK5Q9Y337 293 aaPredicted RBP9.89□□□□□ -0.83
ACTN1-211ENST00000553882 C6orf99Q4VX62 202 aa9.88□□□□□ -0.83
ACTN1-211ENST00000553882 C3orf56Q8N813 242 aa9.88□□□□□ -0.83
ACTN1-211ENST00000553882 OBSCN-AS1Q96MR7 158 aa9.88□□□□□ -0.83
ACTN1-211ENST00000553882 LINC00846Q9NV44 126 aa9.88□□□□□ -0.83
ACTN1-211ENST00000553882 NDUFC2O95298 119 aa9.87□□□□□ -0.83
ACTN1-211ENST00000553882 LELP1Q5T871 98 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms