RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 A0A0J9YXY3 114 aa9.11□□□□□ -0.95
APEX1-205ENST00000553555 GCSHP23434 173 aa9.11□□□□□ -0.95
APEX1-205ENST00000553555 C15orf56Q8N910 161 aa9.11□□□□□ -0.95
APEX1-205ENST00000553555 KMT2AQ03164 3969 aa9.11□□□□□ -0.95
APEX1-205ENST00000553555 SPAG11BQ08648 103 aa9.1□□□□□ -0.95
APEX1-205ENST00000553555 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
APEX1-205ENST00000553555 DNAH10Q8IVF4 4471 aa9.1□□□□□ -0.95
APEX1-205ENST00000553555 M0R2N4 97 aa9.09□□□□□ -0.95
APEX1-205ENST00000553555 HERV-K104P63124 156 aa9.09□□□□□ -0.95
APEX1-205ENST00000553555 CXCL5P42830 114 aa9.09□□□□□ -0.95
APEX1-205ENST00000553555 PTTG1IPP53801 180 aa9.09□□□□□ -0.95
APEX1-205ENST00000553555 SRSF9Q13242 221 aaKnown RBP eCLIP9.09□□□□□ -0.95
APEX1-205ENST00000553555 Q6ZR54 194 aa9.09□□□□□ -0.95
APEX1-205ENST00000553555 CKS1BP61024 79 aa9.08□□□□□ -0.96
APEX1-205ENST00000553555 SFTA2Q6UW10 78 aa9.08□□□□□ -0.96
APEX1-205ENST00000553555 C2orf82Q6UX34 121 aa9.08□□□□□ -0.96
APEX1-205ENST00000553555 C6orf223Q8N319 242 aa9.08□□□□□ -0.96
APEX1-205ENST00000553555 LINC00526Q96FQ7 95 aa9.08□□□□□ -0.96
APEX1-205ENST00000553555 CBY1Q9Y3M2 126 aa9.08□□□□□ -0.96
APEX1-205ENST00000553555 ZNF561-AS1K7EIQ3 104 aa9.07□□□□□ -0.96
APEX1-205ENST00000553555 HIGD2BQ4VC39 106 aa9.07□□□□□ -0.96
APEX1-205ENST00000553555 Q6ZVH6 145 aa9.07□□□□□ -0.96
APEX1-205ENST00000553555 CEND1Q8N111 149 aa9.07□□□□□ -0.96
APEX1-205ENST00000553555 NTN5Q8WTR8 489 aaPredicted RBP9.07□□□□□ -0.96
APEX1-205ENST00000553555 GVQW2A0A096LPI5 108 aaPredicted RBP9.06□□□□□ -0.96
APEX1-205ENST00000553555 USP17L23D6RBM5 183 aa9.06□□□□□ -0.96
APEX1-205ENST00000553555 LITAFQ99732 161 aa9.06□□□□□ -0.96
APEX1-205ENST00000553555 A6NDN8 102 aa9.05□□□□□ -0.96
APEX1-205ENST00000553555 PSCAO43653 123 aa9.05□□□□□ -0.96
APEX1-205ENST00000553555 TIMM17BO60830 172 aa9.05□□□□□ -0.96
APEX1-205ENST00000553555 FXYD2P54710 66 aa9.05□□□□□ -0.96
APEX1-205ENST00000553555 TAL2Q16559 108 aa9.05□□□□□ -0.96
APEX1-205ENST00000553555 UNQ6190/PRO20217Q6UXQ8 127 aa9.05□□□□□ -0.96
APEX1-205ENST00000553555 Q6ZRN7 208 aaPredicted RBP9.05□□□□□ -0.96
APEX1-205ENST00000553555 C2orf48Q96LS8 159 aa9.05□□□□□ -0.96
APEX1-205ENST00000553555 SPANXB1Q9NS25 103 aaPredicted RBP9.05□□□□□ -0.96
APEX1-205ENST00000553555 MEIG1Q5JSS6 88 aa9.05□□□□□ -0.96
APEX1-205ENST00000553555 TMEM238C9JI98 176 aa9.04□□□□□ -0.96
APEX1-205ENST00000553555 CIRBPQ14011 172 aaKnown RBP9.04□□□□□ -0.96
APEX1-205ENST00000553555 ADAMTSL4-AS1Q5T5F5 129 aa9.04□□□□□ -0.96
APEX1-205ENST00000553555 C10orf25Q5T742 122 aa9.04□□□□□ -0.96
APEX1-205ENST00000553555 F8WDY8 70 aa9.03□□□□□ -0.96
APEX1-205ENST00000553555 LECT2O14960 151 aa9.03□□□□□ -0.96
APEX1-205ENST00000553555 SMIM13P0DJ93 91 aa9.03□□□□□ -0.96
APEX1-205ENST00000553555 RAB37Q96AX2 223 aa9.03□□□□□ -0.96
APEX1-205ENST00000553555 TAX1BP3O14907 124 aa9.02□□□□□ -0.96
APEX1-205ENST00000553555 WFDC2Q14508 124 aa9.02□□□□□ -0.96
APEX1-205ENST00000553555 CAMK2N2Q96S95 79 aa9.02□□□□□ -0.96
APEX1-205ENST00000553555 SPANXDQ9BXN6 97 aa9.02□□□□□ -0.96
APEX1-205ENST00000553555 NHP2Q9NX24 153 aaKnown RBP9.02□□□□□ -0.96
APEX1-205ENST00000553555 SPANXCQ9NY87 97 aa9.02□□□□□ -0.96
APEX1-205ENST00000553555 ERG28Q9UKR5 140 aa9.02□□□□□ -0.96
APEX1-205ENST00000553555 DNAH2Q9P225 4427 aa9.02□□□□□ -0.97
APEX1-205ENST00000553555 A0A0U1RRA0 63 aa9.02□□□□□ -0.97
APEX1-205ENST00000553555 LRCOL1A6NCL2 159 aa9.01□□□□□ -0.97
APEX1-205ENST00000553555 K7ERJ3 54 aa9.01□□□□□ -0.97
APEX1-205ENST00000553555 Q6ZRU5 148 aa9.01□□□□□ -0.97
APEX1-205ENST00000553555 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
APEX1-205ENST00000553555 PFN2P35080 140 aa9□□□□□ -0.97
APEX1-205ENST00000553555 LINC00158P58513 81 aa9□□□□□ -0.97
APEX1-205ENST00000553555 SYCNQ0VAF6 134 aa9□□□□□ -0.97
APEX1-205ENST00000553555 COX17Q14061 63 aa9□□□□□ -0.97
APEX1-205ENST00000553555 C9orf116Q5BN46 136 aaPredicted RBP9□□□□□ -0.97
APEX1-205ENST00000553555 DAND5Q8N907 189 aa9□□□□□ -0.97
APEX1-205ENST00000553555 C6orf48Q9UBA6 75 aa9□□□□□ -0.97
APEX1-205ENST00000553555 SLPIP03973 132 aa8.99□□□□□ -0.97
APEX1-205ENST00000553555 C1orf134Q5TEV5 83 aa8.99□□□□□ -0.97
APEX1-205ENST00000553555 MUSTN1Q8IVN3 82 aa8.99□□□□□ -0.97
APEX1-205ENST00000553555 NPC2P61916 151 aa8.98□□□□□ -0.97
APEX1-205ENST00000553555 C14orf177Q52M58 125 aa8.98□□□□□ -0.97
APEX1-205ENST00000553555 MIR7-3HGQ8N6C7 128 aa8.98□□□□□ -0.97
APEX1-205ENST00000553555 NAA38Q9BRA0 125 aaKnown RBP8.98□□□□□ -0.97
APEX1-205ENST00000553555 IFITM1P13164 125 aa8.98□□□□□ -0.97
APEX1-205ENST00000553555 HYDINQ4G0P3 5121 aa8.97□□□□□ -0.97
APEX1-205ENST00000553555 SACSQ9NZJ4 4579 aa8.97□□□□□ -0.97
APEX1-205ENST00000553555 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
APEX1-205ENST00000553555 A6NJY4 79 aa8.97□□□□□ -0.97
APEX1-205ENST00000553555 LINC00308Q8TCZ7 52 aa8.97□□□□□ -0.97
APEX1-205ENST00000553555 EIF4EBP3O60516 100 aaPredicted RBP8.96□□□□□ -0.98
APEX1-205ENST00000553555 RNF151Q2KHN1 245 aa8.96□□□□□ -0.98
APEX1-205ENST00000553555 CARD19Q96LW7 228 aa8.96□□□□□ -0.98
APEX1-205ENST00000553555 DNAH17Q9UFH2 4485 aa8.95□□□□□ -0.98
APEX1-205ENST00000553555 LCE6AA0A183 80 aa8.95□□□□□ -0.98
APEX1-205ENST00000553555 H3BUT2 72 aa8.95□□□□□ -0.98
APEX1-205ENST00000553555 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
APEX1-205ENST00000553555 FRAS1Q86XX4 4008 aa8.95□□□□□ -0.98
APEX1-205ENST00000553555 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
APEX1-205ENST00000553555 VAMP3Q15836 100 aa8.94□□□□□ -0.98
APEX1-205ENST00000553555 COPS9Q8WXC6 57 aa8.94□□□□□ -0.98
APEX1-205ENST00000553555 A0A087WTM6 91 aa8.94□□□□□ -0.98
APEX1-205ENST00000553555 A4D1N5 150 aa8.94□□□□□ -0.98
APEX1-205ENST00000553555 CNBPP62633 177 aaKnown RBP8.94□□□□□ -0.98
APEX1-205ENST00000553555 RPL24P83731 157 aaKnown RBP8.94□□□□□ -0.98
APEX1-205ENST00000553555 PPDPFQ9H3Y8 114 aa8.94□□□□□ -0.98
APEX1-205ENST00000553555 UBE2V1Q13404 147 aa8.93□□□□□ -0.98
APEX1-205ENST00000553555 LOC107984156A0A0G2JMH3 177 aa8.92□□□□□ -0.98
APEX1-205ENST00000553555 NDUFC2-KCTD14E9PQ53 114 aa8.92□□□□□ -0.98
APEX1-205ENST00000553555 ARL17AQ8IVW1 177 aa8.92□□□□□ -0.98
APEX1-205ENST00000553555 Q8N814 137 aa8.92□□□□□ -0.98
APEX1-205ENST00000553555 SND1-IT1Q9HBX3 110 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms