RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GNB1LQ9BYB4 327 aa11.13□□□□□ -0.63
SHMT2-206ENST00000553529 TRAV9-1A0A075B6T8 112 aa11.12□□□□□ -0.63
SHMT2-206ENST00000553529 KRTAP10-8P60410 259 aa11.12□□□□□ -0.63
SHMT2-206ENST00000553529 CBLN2Q8IUK8 224 aa11.12□□□□□ -0.63
SHMT2-206ENST00000553529 URB1-AS1Q96HZ7 61 aa11.12□□□□□ -0.63
SHMT2-206ENST00000553529 LINC01546A6NGU7 62 aa11.11□□□□□ -0.63
SHMT2-206ENST00000553529 F8WDY8 70 aa11.11□□□□□ -0.63
SHMT2-206ENST00000553529 FABP9Q0Z7S8 132 aa11.11□□□□□ -0.63
SHMT2-206ENST00000553529 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
SHMT2-206ENST00000553529 A0A096LNJ9 63 aa11.1□□□□□ -0.63
SHMT2-206ENST00000553529 TRBV30A0A0K0K1B3 111 aa11.1□□□□□ -0.63
SHMT2-206ENST00000553529 K7EMI3 77 aa11.1□□□□□ -0.63
SHMT2-206ENST00000553529 M0QXV9 152 aa11.1□□□□□ -0.63
SHMT2-206ENST00000553529 PMCHL1Q16048 86 aa11.1□□□□□ -0.63
SHMT2-206ENST00000553529 SMIM1B2RUZ4 78 aa11.09□□□□□ -0.63
SHMT2-206ENST00000553529 NDUFC2-KCTD14E9PQ53 114 aa11.09□□□□□ -0.63
SHMT2-206ENST00000553529 ERASQ7Z444 233 aa11.09□□□□□ -0.63
SHMT2-206ENST00000553529 LINC01561Q8N1V8 128 aa11.09□□□□□ -0.63
SHMT2-206ENST00000553529 PACRGQ96M98 296 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-206ENST00000553529 PRSS2P07478 247 aa11.08□□□□□ -0.64
SHMT2-206ENST00000553529 SPINK8P0C7L1 97 aa11.08□□□□□ -0.64
SHMT2-206ENST00000553529 HERVK_113P63121 156 aa11.08□□□□□ -0.64
SHMT2-206ENST00000553529 Q8IZM0 81 aa11.08□□□□□ -0.64
SHMT2-206ENST00000553529 GEMIN7Q9H840 131 aaKnown RBP11.08□□□□□ -0.64
SHMT2-206ENST00000553529 IGLV7-43P04211 117 aa11.07□□□□□ -0.64
SHMT2-206ENST00000553529 NPSP0C0P6 89 aa11.07□□□□□ -0.64
SHMT2-206ENST00000553529 CKS1BP61024 79 aa11.07□□□□□ -0.64
SHMT2-206ENST00000553529 C6orf226Q5I0X4 101 aa11.07□□□□□ -0.64
SHMT2-206ENST00000553529 CST9LQ9H4G1 147 aa11.07□□□□□ -0.64
SHMT2-206ENST00000553529 REG3GQ6UW15 175 aa11.06□□□□□ -0.64
SHMT2-206ENST00000553529 FA2HQ7L5A8 372 aa11.06□□□□□ -0.64
SHMT2-206ENST00000553529 UBE2BP63146 152 aa11.04□□□□□ -0.64
SHMT2-206ENST00000553529 C18orf32Q8TCD1 76 aa11.04□□□□□ -0.64
SHMT2-206ENST00000553529 IGLV5-45A0A087WSX0 123 aa11.03□□□□□ -0.64
SHMT2-206ENST00000553529 TINCRA0A1B0GVN0 87 aa11.03□□□□□ -0.64
SHMT2-206ENST00000553529 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
SHMT2-206ENST00000553529 TRAPPC1Q9Y5R8 145 aa11.03□□□□□ -0.64
SHMT2-206ENST00000553529 PAPPA-AS1Q5QFB9 102 aa11.02□□□□□ -0.65
SHMT2-206ENST00000553529 COX7B2Q8TF08 81 aa11.02□□□□□ -0.65
SHMT2-206ENST00000553529 F8VRH5 84 aa11.01□□□□□ -0.65
SHMT2-206ENST00000553529 PMVKQ15126 192 aa11.01□□□□□ -0.65
SHMT2-206ENST00000553529 C22orf24Q9Y442 160 aa11.01□□□□□ -0.65
SHMT2-206ENST00000553529 NDUFA6P56556 154 aa11□□□□□ -0.65
SHMT2-206ENST00000553529 RAB5BP61020 215 aa11□□□□□ -0.65
SHMT2-206ENST00000553529 SEC11AP67812 179 aa11□□□□□ -0.65
SHMT2-206ENST00000553529 COX19Q49B96 90 aa11□□□□□ -0.65
SHMT2-206ENST00000553529 LRP2P98164 4655 aa11□□□□□ -0.65
SHMT2-206ENST00000553529 KRTAP1-4P0C5Y4 121 aa10.99□□□□□ -0.65
SHMT2-206ENST00000553529 G0S2P27469 103 aa10.99□□□□□ -0.65
SHMT2-206ENST00000553529 H0Y9J4 135 aa10.98□□□□□ -0.65
SHMT2-206ENST00000553529 PDZD11Q5EBL8 140 aa10.98□□□□□ -0.65
SHMT2-206ENST00000553529 YPEL4Q96NS1 127 aa10.98□□□□□ -0.65
SHMT2-206ENST00000553529 COLCA2A8K830 154 aa10.97□□□□□ -0.65
SHMT2-206ENST00000553529 ZNF22P17026 224 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-206ENST00000553529 LINC00614P0C842 121 aa10.96□□□□□ -0.65
SHMT2-206ENST00000553529 IGLC3P0DOY3 106 aa10.96□□□□□ -0.65
SHMT2-206ENST00000553529 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
SHMT2-206ENST00000553529 RPL37AP8A6NKH3 93 aa10.95□□□□□ -0.66
SHMT2-206ENST00000553529 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
SHMT2-206ENST00000553529 LPAP08519 4548 aa10.94□□□□□ -0.66
SHMT2-206ENST00000553529 C11orf86A6NJI1 115 aa10.93□□□□□ -0.66
SHMT2-206ENST00000553529 HBDP02042 147 aa10.93□□□□□ -0.66
SHMT2-206ENST00000553529 CXCL5P42830 114 aa10.93□□□□□ -0.66
SHMT2-206ENST00000553529 PFN2P35080 140 aa10.92□□□□□ -0.66
SHMT2-206ENST00000553529 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
SHMT2-206ENST00000553529 Q8NDZ9 215 aa10.92□□□□□ -0.66
SHMT2-206ENST00000553529 ZNF625Q96I27 306 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-206ENST00000553529 IGLV5-39A0A0G2JS06 123 aa10.91□□□□□ -0.66
SHMT2-206ENST00000553529 LINC00167Q96N53 147 aa10.91□□□□□ -0.66
SHMT2-206ENST00000553529 BAGE3Q86Y29 109 aa10.89□□□□□ -0.67
SHMT2-206ENST00000553529 H3BRM9 83 aa10.88□□□□□ -0.67
SHMT2-206ENST00000553529 TRGC2P03986 189 aa10.88□□□□□ -0.67
SHMT2-206ENST00000553529 LINC01549A6NIU2 74 aa10.87□□□□□ -0.67
SHMT2-206ENST00000553529 ZNF861PO60384 105 aa10.87□□□□□ -0.67
SHMT2-206ENST00000553529 ATP5LO75964 103 aa10.86□□□□□ -0.67
SHMT2-206ENST00000553529 TMEM170BQ5T4T1 132 aa10.86□□□□□ -0.67
SHMT2-206ENST00000553529 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
SHMT2-206ENST00000553529 ANAPC11Q9NYG5 84 aa10.86□□□□□ -0.67
SHMT2-206ENST00000553529 RNF213Q63HN8 5207 aa10.85□□□□□ -0.67
SHMT2-206ENST00000553529 LBHQ53QV2 105 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-206ENST00000553529 TP73-AS1Q9UF72 201 aa10.85□□□□□ -0.67
SHMT2-206ENST00000553529 TMA7Q9Y2S6 64 aaKnown RBP10.85□□□□□ -0.67
SHMT2-206ENST00000553529 IGKV2-28A0A075B6P5 120 aa10.84□□□□□ -0.67
SHMT2-206ENST00000553529 IGKV2D-28P01615 120 aa10.84□□□□□ -0.67
SHMT2-206ENST00000553529 LINC00310P59036 64 aa10.84□□□□□ -0.67
SHMT2-206ENST00000553529 SND1-IT1Q9HBX3 110 aa10.84□□□□□ -0.67
SHMT2-206ENST00000553529 ERG28Q9UKR5 140 aa10.84□□□□□ -0.67
SHMT2-206ENST00000553529 CHTOPQ9Y3Y2 248 aaKnown RBP10.84□□□□□ -0.67
SHMT2-206ENST00000553529 A0A087X002 238 aa10.83□□□□□ -0.68
SHMT2-206ENST00000553529 A0A0U1RRA0 63 aa10.83□□□□□ -0.68
SHMT2-206ENST00000553529 BCE1O60756 84 aa10.83□□□□□ -0.68
SHMT2-206ENST00000553529 IGLV5-37A0A075B6J1 123 aa10.82□□□□□ -0.68
SHMT2-206ENST00000553529 NUPR1O60356 82 aa10.82□□□□□ -0.68
SHMT2-206ENST00000553529 TMEM238C9JI98 176 aa10.81□□□□□ -0.68
SHMT2-206ENST00000553529 VPREB1P12018 145 aa10.81□□□□□ -0.68
SHMT2-206ENST00000553529 IGLV1-50A0A075B6I6 118 aa10.8□□□□□ -0.68
SHMT2-206ENST00000553529 KRTAP13-1Q8IUC0 172 aa10.8□□□□□ -0.68
SHMT2-206ENST00000553529 IFI27L1Q96BM0 104 aa10.8□□□□□ -0.68
SHMT2-206ENST00000553529 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
SHMT2-206ENST00000553529 H0Y8G0 127 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms