RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SDCBPO00560 298 aaPredicted RBP2.83□□□□□ -1.96
CPSF6-206ENST00000550987 LYRM1O43325 122 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 GZMBP10144 247 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 SNCAP37840 140 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 ATP5EP56381 51 aaPredicted RBP2.83□□□□□ -1.96
CPSF6-206ENST00000550987 NPC2P61916 151 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 Q0VG73 95 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 MIAQ16674 131 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 FAM74A1Q5RGS3 127 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 TVP23CQ96ET8 276 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 NABP2Q9BQ15 211 aa2.83□□□□□ -1.96
CPSF6-206ENST00000550987 PIGBOS1A0A0B4J2F0 54 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 A0A1B0GU33 70 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 CPSF4LA6NMK7 179 aaKnown RBP2.82□□□□□ -1.96
CPSF6-206ENST00000550987 ZNF736B4DX44 427 aaPredicted RBP2.82□□□□□ -1.96
CPSF6-206ENST00000550987 PITX3O75364 302 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 SNCGO76070 127 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 IGKV1-16P04430 117 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 CD24P25063 80 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 CDK5R1Q15078 307 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 ZNF322Q6U7Q0 402 aaPredicted RBP2.82□□□□□ -1.96
CPSF6-206ENST00000550987 DPPA3Q6W0C5 159 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 LYPD6Q86Y78 171 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 Q8NAQ8 132 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 PFN4Q8NHR9 129 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 LINC00052Q96N35 136 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 GAFA1Q96PS6 74 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 UPK3BQ9BT76 320 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 SMCO4Q9NRQ5 59 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 LSM2Q9Y333 95 aaKnown RBP2.82□□□□□ -1.96
CPSF6-206ENST00000550987 LINC00312Q9Y6C7 94 aa2.82□□□□□ -1.96
CPSF6-206ENST00000550987 F8W1H4 67 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 M0R129 80 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 CREBL2O60519 120 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-206ENST00000550987 EDF1O60869 148 aaKnown RBP2.81□□□□□ -1.96
CPSF6-206ENST00000550987 CCL3L1P16619 93 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 ZNF22P17026 224 aaPredicted RBP2.81□□□□□ -1.96
CPSF6-206ENST00000550987 FUSP35637 526 aaKnown RBP eCLIP2.81□□□□□ -1.963e-8■■■■□ 26.2
CPSF6-206ENST00000550987 POLR2JP52435 117 aaKnown RBP2.81□□□□□ -1.96
CPSF6-206ENST00000550987 CAV3P56539 151 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 DEFB136Q30KP8 78 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 KHDC3LQ587J8 217 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 SDIM1Q6ZPB5 146 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 LINC00304Q8N9R0 145 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 HYLS1Q96M11 299 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 UQCR10Q9UDW1 63 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 RABAC1Q9UI14 185 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 HILPDAQ9Y5L2 63 aa2.81□□□□□ -1.96
CPSF6-206ENST00000550987 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 ODF3BA8MYP8 253 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 K7EP34 96 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 CD3DP04234 171 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 SHBGP04278 402 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 ZNF705BP0CI00 300 aaPredicted RBP2.8□□□□□ -1.96
CPSF6-206ENST00000550987 CIRBPQ14011 172 aaKnown RBP2.8□□□□□ -1.96
CPSF6-206ENST00000550987 ATP11AUNQ6ZP68 121 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 SMCR5Q8TEV8 140 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 Q96M85 177 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 SMDT1Q9H4I9 107 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 TMEM242Q9NWH2 141 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 LHFPL6Q9Y693 200 aa2.8□□□□□ -1.96
CPSF6-206ENST00000550987 A0A1W2PNN7 141 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 C17orf98A8MV24 154 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 OOSP1A8MZH6 123 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 M0R2N4 97 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 PDCD5O14737 125 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 NDUFB6O95139 128 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 APOC3P02656 99 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 CKS2P33552 79 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 PATE2Q6UY27 113 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 SOSTDC1Q6X4U4 206 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 C15orf53Q8NAA6 179 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 OR2T35Q8NGX2 323 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 TSKUQ8WUA8 353 aa2.79□□□□□ -1.96
CPSF6-206ENST00000550987 MRPS24Q96EL2 167 aaKnown RBP2.79□□□□□ -1.96
CPSF6-206ENST00000550987 H3BSH0 61 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 M0R135 149 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 MRPS14O60783 128 aaKnown RBP2.78□□□□□ -1.96
CPSF6-206ENST00000550987 COX7CP15954 63 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 MINOS1Q5TGZ0 78 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 LINC00471Q8N535 108 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 VSTM2AQ8TAG5 236 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 SPTSSAQ969W0 71 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 TTTY13Q9BZ97 58 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 NPVFQ9HCQ7 196 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 MINOS1-NBL1R4GNA1 71 aa2.78□□□□□ -1.96
CPSF6-206ENST00000550987 IGHV3-73A0A0B4J1V6 119 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 MUC21A0A0G2JKD1 596 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 UBE2L5PA0A1B0GUS4 154 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 C17orf112F2Z3M2 114 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 J3QLW9 94 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 TIMM17BO60830 172 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 CYB5AP00167 134 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 MT-ATP8P03928 68 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 MT1HL1P0DM35 61 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 PIPP12273 146 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-206ENST00000550987 XCL1P47992 114 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 UBE2L3P68036 154 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms