RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 TRAV8-4A0A0B4J246 113 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 TMEM223A0PJW6 202 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 E9PLD3 99 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 TSTD3H0UI37 97 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 IGHV3-30P01768 117 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 IGHV3-33P01772 117 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 IGHV3-30-3P0DP02 117 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 IGHV3-30-5P0DP03 117 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 HERVK_113P61574 105 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 ENHOQ6UWT2 76 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 LINC00469Q8N7U9 141 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 MIEN1Q9BRT3 115 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 PRO1933Q9H354 126 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 KLK12Q9UKR0 248 aa4.13□□□□□ -1.75
DEPDC4-209ENST00000550587 A0A087WZ39 114 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 IGKV2D-26A0A0A0MRZ7 120 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 IGKV3OR2-268A0A0C4DH90 116 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 IGLV5-39A0A0G2JS06 123 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 LEPROTO15243 131 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 DLEU1O43261 78 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 COX8AP10176 69 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 MIAQ16674 131 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 CD164L2Q6UWJ8 174 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 LINC01561Q8N1V8 128 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 CHCHD10Q8WYQ3 142 aaPredicted RBP4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 C14orf144Q96I85 54 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 FAM30AQ9NZY2 134 aa4.12□□□□□ -1.75
DEPDC4-209ENST00000550587 TRAV8-3A0A0A6YYJ7 113 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 IGHV1-58A0A0C4DH39 117 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 EPM2AB3EWF7 344 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 J3QQQ9 107 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 CRPP02741 224 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 XCL1P47992 114 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 NMUP48645 174 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 SLC25A34Q6PIV7 304 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 CLPSL2Q6UWE3 100 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 BOD1L2Q8IYS8 172 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 C10orf126Q8N4M7 172 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 UBE2WQ96B02 151 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 PLEKHB2Q96CS7 222 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 UQCR10Q9UDW1 63 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 VPS13DQ5THJ4 4388 aa4.11□□□□□ -1.75
DEPDC4-209ENST00000550587 IGLV10-54A0A075B6I4 117 aa4.1□□□□□ -1.75
DEPDC4-209ENST00000550587 SMIM1B2RUZ4 78 aa4.1□□□□□ -1.75
DEPDC4-209ENST00000550587 COX7A2LO14548 114 aa4.1□□□□□ -1.75
DEPDC4-209ENST00000550587 SPINK8P0C7L1 97 aa4.1□□□□□ -1.75
DEPDC4-209ENST00000550587 PCP2Q8IVA1 136 aa4.1□□□□□ -1.75
DEPDC4-209ENST00000550587 MYMXA0A1B0GTQ4 84 aa4.09□□□□□ -1.75
DEPDC4-209ENST00000550587 LGALS3P17931 250 aaKnown RBP4.09□□□□□ -1.75
DEPDC4-209ENST00000550587 DDTP30046 118 aa4.09□□□□□ -1.75
DEPDC4-209ENST00000550587 KRTAP26-1Q6PEX3 210 aa4.09□□□□□ -1.75
DEPDC4-209ENST00000550587 C5orf38Q86SI9 138 aa4.09□□□□□ -1.75
DEPDC4-209ENST00000550587 HIGD1BQ9P298 99 aa4.09□□□□□ -1.75
DEPDC4-209ENST00000550587 HECTD4Q9Y4D8 3996 aa4.09□□□□□ -1.75
DEPDC4-209ENST00000550587 DNAH10Q8IVF4 4471 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 IGHV3-64A0A075B6Q5 118 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 PCP4L1A6NKN8 68 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 ZNF815PA8K554 130 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 APOMO95445 188 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 MALP21145 153 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 TSPEAR-AS2P59090 65 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 C6orf226Q5I0X4 101 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 RMI2Q96E14 147 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 C1orf43Q9BWL3 253 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 TTTY13Q9BZ97 58 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 NDUFA12Q9UI09 145 aa4.08□□□□□ -1.76
DEPDC4-209ENST00000550587 IGKV2D-24A0A075B6R9 120 aa4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 NDUFA1O15239 70 aa4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 INAFM2P0DMQ5 153 aa4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 HNRNPA3P51991 378 aaKnown RBP4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 KIAA0087Q14695 138 aa4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 SFTA2Q6UW10 78 aa4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 C2orf91Q6ZV80 131 aa4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 Q8IZM0 81 aa4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 COX7B2Q8TF08 81 aa4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 ZNF625Q96I27 306 aaPredicted RBP4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 TM2D2Q9BX73 214 aa4.07□□□□□ -1.76
DEPDC4-209ENST00000550587 A0A0J9YXY3 114 aa4.06□□□□□ -1.76
DEPDC4-209ENST00000550587 HERV-K104P63124 156 aa4.06□□□□□ -1.76
DEPDC4-209ENST00000550587 CTAG1AP78358 180 aa4.06□□□□□ -1.76
DEPDC4-209ENST00000550587 CFAP161Q6P656 301 aa4.06□□□□□ -1.76
DEPDC4-209ENST00000550587 SCGB1D4Q6XE38 83 aa4.06□□□□□ -1.76
DEPDC4-209ENST00000550587 ORAOV1Q8WV07 137 aa4.06□□□□□ -1.76
DEPDC4-209ENST00000550587 KRTAP1-5Q9BYS1 174 aa4.06□□□□□ -1.76
DEPDC4-209ENST00000550587 Q9HAA7 133 aa4.06□□□□□ -1.76
DEPDC4-209ENST00000550587 LINC00587B1AMM8 73 aa4.05□□□□□ -1.76
DEPDC4-209ENST00000550587 F8WDY8 70 aa4.05□□□□□ -1.76
DEPDC4-209ENST00000550587 PRSS2P07478 247 aa4.05□□□□□ -1.76
DEPDC4-209ENST00000550587 TAL2Q16559 108 aa4.05□□□□□ -1.76
DEPDC4-209ENST00000550587 TOMM7Q9P0U1 55 aa4.05□□□□□ -1.76
DEPDC4-209ENST00000550587 TP73-AS1Q9UF72 201 aa4.05□□□□□ -1.76
DEPDC4-209ENST00000550587 PSCAO43653 123 aa4.04□□□□□ -1.76
DEPDC4-209ENST00000550587 TIMM17BO60830 172 aa4.04□□□□□ -1.76
DEPDC4-209ENST00000550587 CXCL5P42830 114 aa4.04□□□□□ -1.76
DEPDC4-209ENST00000550587 CKS1BP61024 79 aa4.04□□□□□ -1.76
DEPDC4-209ENST00000550587 CIRBPQ14011 172 aaKnown RBP4.04□□□□□ -1.76
DEPDC4-209ENST00000550587 Q6ZVH6 145 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms