RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	TSPEAR-AS2	P59090	65 aa		7.66	□□□□□ -1.18
CNOT2-223	ENST00000550160	KIAA0087	Q14695	138 aa		7.66	□□□□□ -1.18
CNOT2-223	ENST00000550160	SLC25A34	Q6PIV7	304 aa		7.66	□□□□□ -1.18
CNOT2-223	ENST00000550160	CAMK2N2	Q96S95	79 aa		7.66	□□□□□ -1.18
CNOT2-223	ENST00000550160	LINC00587	B1AMM8	73 aa		7.65	□□□□□ -1.18
CNOT2-223	ENST00000550160	TSTD3	H0UI37	97 aa		7.65	□□□□□ -1.18
CNOT2-223	ENST00000550160	SCGB1D4	Q6XE38	83 aa		7.65	□□□□□ -1.18
CNOT2-223	ENST00000550160	PCP2	Q8IVA1	136 aa		7.65	□□□□□ -1.18
CNOT2-223	ENST00000550160	NTN5	Q8WTR8	489 aa	Predicted RBP	7.65	□□□□□ -1.18
CNOT2-223	ENST00000550160	C14orf144	Q96I85	54 aa		7.65	□□□□□ -1.18
CNOT2-223	ENST00000550160	STARD9	Q9P2P6	4700 aa		7.65	□□□□□ -1.19
CNOT2-223	ENST00000550160	TENM2	Q9NT68	2774 aa		7.65	□□□□□ -1.19
CNOT2-223	ENST00000550160	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.64	□□□□□ -1.19
CNOT2-223	ENST00000550160	LRCOL1	A6NCL2	159 aa		7.64	□□□□□ -1.19
CNOT2-223	ENST00000550160	DLEU1	O43261	78 aa		7.64	□□□□□ -1.19
CNOT2-223	ENST00000550160	SYCN	Q0VAF6	134 aa		7.64	□□□□□ -1.19
CNOT2-223	ENST00000550160	C2orf82	Q6UX34	121 aa		7.64	□□□□□ -1.19
CNOT2-223	ENST00000550160	BOD1L2	Q8IYS8	172 aa		7.64	□□□□□ -1.19
CNOT2-223	ENST00000550160	ZNF625	Q96I27	306 aa	Predicted RBP	7.64	□□□□□ -1.19
CNOT2-223	ENST00000550160	TTTY13	Q9BZ97	58 aa		7.64	□□□□□ -1.19
CNOT2-223	ENST00000550160	UQCR10	Q9UDW1	63 aa		7.64	□□□□□ -1.19
CNOT2-223	ENST00000550160	TRBV30	A0A0K0K1B3	111 aa		7.63	□□□□□ -1.19
CNOT2-223	ENST00000550160	CIRBP	Q14011	172 aa	Known RBP	7.63	□□□□□ -1.19
CNOT2-223	ENST00000550160	MEIG1	Q5JSS6	88 aa		7.63	□□□□□ -1.19
CNOT2-223	ENST00000550160	LINC00526	Q96FQ7	95 aa		7.63	□□□□□ -1.19
CNOT2-223	ENST00000550160	CSMD3	Q7Z407	3707 aa		7.63	□□□□□ -1.19
CNOT2-223	ENST00000550160	DNAH7	Q8WXX0	4024 aa		7.62	□□□□□ -1.19
CNOT2-223	ENST00000550160		A0A087WTM6	91 aa		7.62	□□□□□ -1.19
CNOT2-223	ENST00000550160	WFDC2	Q14508	124 aa		7.62	□□□□□ -1.19
CNOT2-223	ENST00000550160		Q8N814	137 aa		7.62	□□□□□ -1.19
CNOT2-223	ENST00000550160	CARD19	Q96LW7	228 aa		7.62	□□□□□ -1.19
CNOT2-223	ENST00000550160	PRO1933	Q9H354	126 aa		7.62	□□□□□ -1.19
CNOT2-223	ENST00000550160	TMEM238	C9JI98	176 aa		7.61	□□□□□ -1.19
CNOT2-223	ENST00000550160	RTL8C	O15255	209 aa		7.61	□□□□□ -1.19
CNOT2-223	ENST00000550160	C21orf62-AS1	Q17RA5	79 aa		7.61	□□□□□ -1.19
CNOT2-223	ENST00000550160	UNQ6190/PRO20217	Q6UXQ8	127 aa		7.61	□□□□□ -1.19
CNOT2-223	ENST00000550160	LINC00336	Q6ZUF6	198 aa		7.61	□□□□□ -1.19
CNOT2-223	ENST00000550160	MIEN1	Q9BRT3	115 aa		7.61	□□□□□ -1.19
CNOT2-223	ENST00000550160	PKIG	Q9Y2B9	76 aa		7.61	□□□□□ -1.19
CNOT2-223	ENST00000550160	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	7.6	□□□□□ -1.19
CNOT2-223	ENST00000550160		A0A0J9YXY3	114 aa		7.6	□□□□□ -1.19
CNOT2-223	ENST00000550160	CNBP	P62633	177 aa	Known RBP	7.6	□□□□□ -1.19
CNOT2-223	ENST00000550160	COX17	Q14061	63 aa		7.6	□□□□□ -1.19
CNOT2-223	ENST00000550160	RNF151	Q2KHN1	245 aa		7.6	□□□□□ -1.19
CNOT2-223	ENST00000550160		Q6ZRU5	148 aa		7.6	□□□□□ -1.19
CNOT2-223	ENST00000550160	ERG28	Q9UKR5	140 aa		7.6	□□□□□ -1.19
CNOT2-223	ENST00000550160	DYNC2H1	Q8NCM8	4307 aa	Known RBP	7.6	□□□□□ -1.19
CNOT2-223	ENST00000550160	TIMM17B	O60830	172 aa		7.59	□□□□□ -1.19
CNOT2-223	ENST00000550160	GCSH	P23434	173 aa		7.59	□□□□□ -1.19
CNOT2-223	ENST00000550160	HNRNPA3	P51991	378 aa	Known RBP	7.59	□□□□□ -1.19
CNOT2-223	ENST00000550160	LINC00158	P58513	81 aa		7.59	□□□□□ -1.19
CNOT2-223	ENST00000550160	PFN2	P35080	140 aa		7.58	□□□□□ -1.2
CNOT2-223	ENST00000550160	C10orf25	Q5T742	122 aa		7.58	□□□□□ -1.2
CNOT2-223	ENST00000550160	HIGD1B	Q9P298	99 aa		7.58	□□□□□ -1.2
CNOT2-223	ENST00000550160	C6orf48	Q9UBA6	75 aa		7.58	□□□□□ -1.2
CNOT2-223	ENST00000550160	SMIM13	P0DJ93	91 aa		7.57	□□□□□ -1.2
CNOT2-223	ENST00000550160	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
CNOT2-223	ENST00000550160	COPS9	Q8WXC6	57 aa		7.57	□□□□□ -1.2
CNOT2-223	ENST00000550160	TP73-AS1	Q9UF72	201 aa		7.57	□□□□□ -1.2
CNOT2-223	ENST00000550160	NDUFC2-KCTD14	E9PQ53	114 aa		7.56	□□□□□ -1.2
CNOT2-223	ENST00000550160		Q6ZVH6	145 aa		7.56	□□□□□ -1.2
CNOT2-223	ENST00000550160	SPANXB1	Q9NS25	103 aa	Predicted RBP	7.56	□□□□□ -1.2
CNOT2-223	ENST00000550160		A0A0U1RRA0	63 aa		7.55	□□□□□ -1.2
CNOT2-223	ENST00000550160	LOC107984640	A0A0U1RRK4	108 aa		7.55	□□□□□ -1.2
CNOT2-223	ENST00000550160	SLPI	P03973	132 aa		7.55	□□□□□ -1.2
CNOT2-223	ENST00000550160	C9orf116	Q5BN46	136 aa	Predicted RBP	7.55	□□□□□ -1.2
CNOT2-223	ENST00000550160	HIST1H4G	Q99525	98 aa		7.55	□□□□□ -1.2
CNOT2-223	ENST00000550160	PLEC	Q15149	4684 aa	Known RBP	7.55	□□□□□ -1.2
CNOT2-223	ENST00000550160	IGLV5-52	A0A0A0MRZ9	124 aa		7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	RPL18A	Q02543	176 aa	Known RBP	7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	TAL2	Q16559	108 aa		7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	C2orf91	Q6ZV80	131 aa		7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	MIR7-3HG	Q8N6C7	128 aa		7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	C9orf163	Q8N9P6	203 aa		7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	LITAF	Q99732	161 aa		7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	SPANXD	Q9BXN6	97 aa		7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	KRTAP4-8	Q9BYQ9	185 aa		7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	SPANXC	Q9NY87	97 aa		7.54	□□□□□ -1.2
CNOT2-223	ENST00000550160	TLX1NB	P0CAT3	122 aa		7.53	□□□□□ -1.2
CNOT2-223	ENST00000550160	IFITM1	P13164	125 aa		7.53	□□□□□ -1.2
CNOT2-223	ENST00000550160	DDT	P30046	118 aa		7.53	□□□□□ -1.2
CNOT2-223	ENST00000550160	HSD52	Q0P140	79 aa		7.52	□□□□□ -1.21
CNOT2-223	ENST00000550160	DAND5	Q8N907	189 aa		7.52	□□□□□ -1.21
CNOT2-223	ENST00000550160	ALMS1	Q8TCU4	4167 aa		7.52	□□□□□ -1.21
CNOT2-223	ENST00000550160	GAGE2E	Q4V326	116 aa		7.51	□□□□□ -1.21
CNOT2-223	ENST00000550160	ADAMTSL4-AS1	Q5T5F5	129 aa		7.51	□□□□□ -1.21
CNOT2-223	ENST00000550160	SND1-IT1	Q9HBX3	110 aa		7.51	□□□□□ -1.21
CNOT2-223	ENST00000550160	GAGE2D	Q9UEU5	116 aa		7.51	□□□□□ -1.21
CNOT2-223	ENST00000550160		M0R143	59 aa		7.5	□□□□□ -1.21
CNOT2-223	ENST00000550160	PTTG1IP	P53801	180 aa		7.5	□□□□□ -1.21
CNOT2-223	ENST00000550160	RPL24	P83731	157 aa	Known RBP	7.5	□□□□□ -1.21
CNOT2-223	ENST00000550160	GAGE2B	Q13066	116 aa		7.5	□□□□□ -1.21
CNOT2-223	ENST00000550160		Q6ZRP5	223 aa		7.5	□□□□□ -1.21
CNOT2-223	ENST00000550160	LINC00308	Q8TCZ7	52 aa		7.5	□□□□□ -1.21
CNOT2-223	ENST00000550160	PPDPF	Q9H3Y8	114 aa		7.5	□□□□□ -1.21
CNOT2-223	ENST00000550160	LINC00474	Q9P2X8	69 aa		7.5	□□□□□ -1.21
CNOT2-223	ENST00000550160	PCP4L1	A6NKN8	68 aa		7.49	□□□□□ -1.21
CNOT2-223	ENST00000550160	C16orf90	A8MZG2	172 aa		7.49	□□□□□ -1.21
CNOT2-223	ENST00000550160	NPC2	P61916	151 aa		7.49	□□□□□ -1.21
CNOT2-223	ENST00000550160	CTAG1A	P78358	180 aa		7.49	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms