RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 ITLN2Q8WWU7 325 aaPredicted RBP3.08□□□□□ -1.92
NPAS3-204ENST00000546849 TM2D3Q9BRN9 247 aa3.08□□□□□ -1.92
NPAS3-204ENST00000546849 SMIM2Q9BVW6 85 aa3.08□□□□□ -1.92
NPAS3-204ENST00000546849 WNK2Q9Y3S1 2297 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.07□□□□□ -1.92
NPAS3-204ENST00000546849 NPYP01303 97 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 MGPP08493 103 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 COX6B1P14854 86 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 CIRBPQ14011 172 aaKnown RBP3.07□□□□□ -1.92
NPAS3-204ENST00000546849 ADM2Q7Z4H4 148 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 C10orf105Q8TEF2 133 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 TOMM6Q96B49 74 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 PLEKHB2Q96CS7 222 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 AGPAT4-IT1Q9H0P7 198 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 SPCS1Q9Y6A9 102 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 ABCA4P78363 2273 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 PCLOQ9Y6V0 5065 aa3.07□□□□□ -1.92
NPAS3-204ENST00000546849 MUC21A0A0G2JKD1 596 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 MUC21A0A140T8X8 626 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 MYMXA0A1B0GTQ4 84 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 A8MWV9 139 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 TMEM262E9PQX1 116 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 H3BUX3 64 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 H3BVH4 76 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 K7EP34 96 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 ABCA1O95477 2261 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 LGALS3P17931 250 aaKnown RBP3.06□□□□□ -1.92
NPAS3-204ENST00000546849 CRIP1P50238 77 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 TDRG1Q3Y452 100 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 DYNAPQ8N1N2 210 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 TMEM86BQ8N661 226 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 Q8TAT8 98 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 PTH2Q96A98 100 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 RHPN1-AS1Q9BWJ2 59 aa3.06□□□□□ -1.92
NPAS3-204ENST00000546849 PRRC2CQ9Y520 2896 aaKnown RBP3.06□□□□□ -1.92
NPAS3-204ENST00000546849 A0A1W2PPM0 123 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 K7ERS5 55 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 TAX1BP3O14907 124 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 SNCGO76070 127 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 CD7P09564 240 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 CD24P25063 80 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 RNASE4P34096 147 aaKnown RBP3.05□□□□□ -1.92
NPAS3-204ENST00000546849 OCIAD2Q56VL3 154 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 AMMECR1LQ6DCA0 310 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 SFTA2Q6UW10 78 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 FOXI2Q6ZQN5 318 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 DYNLRB2Q8TF09 96 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 DNAJC30Q96LL9 226 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 ANAPC13Q9BS18 74 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 CST9LQ9H4G1 147 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 SVEP1Q4LDE5 3571 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 PLXNB1O43157 2135 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 HYDINQ4G0P3 5121 aa3.05□□□□□ -1.92
NPAS3-204ENST00000546849 TRBV25-1A0A075B6N4 114 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 TRBV6-5A0A0K0K1A5 114 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 C11orf86A6NJI1 115 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 ZNF815PA8K554 130 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 IGLL5B9A064 214 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 G3V318 75 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 H3BUT2 72 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 I3L3M4 83 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 NCR2O95944 276 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 LGALS1P09382 135 aaKnown RBP3.04□□□□□ -1.92
NPAS3-204ENST00000546849 INAFM2P0DMQ5 153 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 SCGB1C2P0DMR2 95 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 ZNF56Q15929 161 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 LDLRAD2Q5SZI1 272 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 RAB37Q96AX2 223 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 MRPL16Q9NX20 251 aaKnown RBP3.04□□□□□ -1.92
NPAS3-204ENST00000546849 VPREB3Q9UKI3 123 aa3.04□□□□□ -1.92
NPAS3-204ENST00000546849 PRKDCP78527 4128 aaKnown RBP3.03□□□□□ -1.92
NPAS3-204ENST00000546849 TRBV27A0A0K0K1C4 114 aa3.03□□□□□ -1.92
NPAS3-204ENST00000546849 A0A1W2PNN7 141 aa3.03□□□□□ -1.92
NPAS3-204ENST00000546849 CLPSL1A2RUU4 121 aa3.03□□□□□ -1.92
NPAS3-204ENST00000546849 CCL25O15444 150 aa3.03□□□□□ -1.92
NPAS3-204ENST00000546849 LY6HO94772 140 aa3.03□□□□□ -1.92
NPAS3-204ENST00000546849 HLA-DMBP28068 263 aa3.03□□□□□ -1.92
NPAS3-204ENST00000546849 ATP6V0E2Q8NHE4 81 aa3.03□□□□□ -1.92
NPAS3-204ENST00000546849 SPANXB1Q9NS25 103 aaPredicted RBP3.03□□□□□ -1.92
NPAS3-204ENST00000546849 NHP2Q9NX24 153 aaKnown RBP3.03□□□□□ -1.92
NPAS3-204ENST00000546849 MRPL35Q9NZE8 188 aaKnown RBP3.03□□□□□ -1.92
NPAS3-204ENST00000546849 TP73-AS1Q9UF72 201 aa3.03□□□□□ -1.92
NPAS3-204ENST00000546849 SONP18583 2426 aaKnown RBP3.03□□□□□ -1.92
NPAS3-204ENST00000546849 TRAV8-2A0A0B4J237 113 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 SDHAF1A6NFY7 115 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 M0R2P5 195 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 P0C880 135 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 IFITM1P13164 125 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 PSMB8P28062 276 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 ZNF80P51504 273 aaPredicted RBP3.02□□□□□ -1.93
NPAS3-204ENST00000546849 TMEM170BQ5T4T1 132 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 ZFAND2AQ8N6M9 145 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 SIGMAR1Q99720 223 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 LINC00467Q9BRT7 94 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 R4GN34 69 aa3.02□□□□□ -1.93
NPAS3-204ENST00000546849 A0A0J9YX75 114 aa3.01□□□□□ -1.93
NPAS3-204ENST00000546849 TRBV10-1A0A0K0K1A3 114 aa3.01□□□□□ -1.93
NPAS3-204ENST00000546849 UBE2L6O14933 153 aa3.01□□□□□ -1.93
NPAS3-204ENST00000546849 LEPROTO15243 131 aa3.01□□□□□ -1.93
NPAS3-204ENST00000546849 FGF6P10767 208 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms