RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
RAB5B-203ENST00000546810 CAMK2N2Q96S95 79 aa8.64□□□□□ -1.03
RAB5B-203ENST00000546810 CHAC1Q9BUX1 264 aa8.64□□□□□ -1.03
RAB5B-203ENST00000546810 CDKN2A-AS1Q9UH64 79 aa8.64□□□□□ -1.03
RAB5B-203ENST00000546810 IGLV5-45A0A087WSX0 123 aa8.63□□□□□ -1.03
RAB5B-203ENST00000546810 SLPIP03973 132 aa8.63□□□□□ -1.03
RAB5B-203ENST00000546810 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
RAB5B-203ENST00000546810 LINC01620Q4KN68 170 aa8.62□□□□□ -1.03
RAB5B-203ENST00000546810 COA6Q5JTJ3 125 aaKnown RBP8.62□□□□□ -1.03
RAB5B-203ENST00000546810 MAP1LC3CQ9BXW4 147 aa8.62□□□□□ -1.03
RAB5B-203ENST00000546810 F8VRH5 84 aa8.61□□□□□ -1.03
RAB5B-203ENST00000546810 H0Y8G0 127 aa8.61□□□□□ -1.03
RAB5B-203ENST00000546810 NDUFA1O15239 70 aa8.61□□□□□ -1.03
RAB5B-203ENST00000546810 KRTAP10-4P60372 401 aaPredicted RBP8.61□□□□□ -1.03
RAB5B-203ENST00000546810 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
RAB5B-203ENST00000546810 Q6ZSA8 131 aa8.61□□□□□ -1.03
RAB5B-203ENST00000546810 TOMM7Q9P0U1 55 aa8.61□□□□□ -1.03
RAB5B-203ENST00000546810 CKS1BP61024 79 aa8.6□□□□□ -1.03
RAB5B-203ENST00000546810 TMEM170BQ5T4T1 132 aa8.6□□□□□ -1.03
RAB5B-203ENST00000546810 Q8IZM0 81 aa8.6□□□□□ -1.03
RAB5B-203ENST00000546810 C11orf86A6NJI1 115 aa8.59□□□□□ -1.03
RAB5B-203ENST00000546810 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
RAB5B-203ENST00000546810 ZNF22P17026 224 aaPredicted RBP8.59□□□□□ -1.03
RAB5B-203ENST00000546810 CXCL5P42830 114 aa8.59□□□□□ -1.03
RAB5B-203ENST00000546810 RNF151Q2KHN1 245 aa8.59□□□□□ -1.03
RAB5B-203ENST00000546810 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
RAB5B-203ENST00000546810 Q6ZRU5 148 aa8.59□□□□□ -1.03
RAB5B-203ENST00000546810 MRPL35Q9NZE8 188 aaKnown RBP8.59□□□□□ -1.03
RAB5B-203ENST00000546810 S100A6P06703 90 aa8.58□□□□□ -1.04
RAB5B-203ENST00000546810 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
RAB5B-203ENST00000546810 KIAA0087Q14695 138 aa8.58□□□□□ -1.04
RAB5B-203ENST00000546810 LOC107984640A0A0U1RRK4 108 aa8.57□□□□□ -1.04
RAB5B-203ENST00000546810 PLNP26678 52 aa8.57□□□□□ -1.04
RAB5B-203ENST00000546810 ODF1Q14990 250 aa8.57□□□□□ -1.04
RAB5B-203ENST00000546810 COX7B2Q8TF08 81 aa8.57□□□□□ -1.04
RAB5B-203ENST00000546810 LRP2P98164 4655 aa8.57□□□□□ -1.04
RAB5B-203ENST00000546810 TRBV30A0A0K0K1B3 111 aa8.56□□□□□ -1.04
RAB5B-203ENST00000546810 UNQ6190/PRO20217Q6UXQ8 127 aa8.56□□□□□ -1.04
RAB5B-203ENST00000546810 SCXQ7RTU7 201 aa8.56□□□□□ -1.04
RAB5B-203ENST00000546810 DPH3Q96FX2 82 aa8.56□□□□□ -1.04
RAB5B-203ENST00000546810 LINC00474Q9P2X8 69 aa8.56□□□□□ -1.04
RAB5B-203ENST00000546810 DPM2O94777 84 aa8.55□□□□□ -1.04
RAB5B-203ENST00000546810 S100A2P29034 98 aa8.55□□□□□ -1.04
RAB5B-203ENST00000546810 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
RAB5B-203ENST00000546810 SYS1-DBNDD2H3BUS1 97 aa8.54□□□□□ -1.04
RAB5B-203ENST00000546810 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
RAB5B-203ENST00000546810 TMEM223A0PJW6 202 aa8.53□□□□□ -1.04
RAB5B-203ENST00000546810 IGKCP01834 107 aa8.53□□□□□ -1.04
RAB5B-203ENST00000546810 RPL18AQ02543 176 aaKnown RBP8.53□□□□□ -1.04
RAB5B-203ENST00000546810 C10orf25Q5T742 122 aa8.53□□□□□ -1.04
RAB5B-203ENST00000546810 SFTA2Q6UW10 78 aa8.53□□□□□ -1.04
RAB5B-203ENST00000546810 PET117Q6UWS5 81 aa8.53□□□□□ -1.04
RAB5B-203ENST00000546810 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
RAB5B-203ENST00000546810 IGKV2-24A0A0C4DH68 120 aa8.52□□□□□ -1.05
RAB5B-203ENST00000546810 TLX1NBP0CAT3 122 aa8.52□□□□□ -1.05
RAB5B-203ENST00000546810 KRTDAPP60985 99 aa8.52□□□□□ -1.05
RAB5B-203ENST00000546810 HERVK_113P61574 105 aa8.52□□□□□ -1.05
RAB5B-203ENST00000546810 GAGE2BQ13066 116 aa8.52□□□□□ -1.05
RAB5B-203ENST00000546810 MAJINQ3KP22 176 aa8.52□□□□□ -1.05
RAB5B-203ENST00000546810 A0A096LNI7 61 aa8.51□□□□□ -1.05
RAB5B-203ENST00000546810 C20orf202A1L168 122 aa8.51□□□□□ -1.05
RAB5B-203ENST00000546810 PTTG1IPP53801 180 aa8.51□□□□□ -1.05
RAB5B-203ENST00000546810 CIRBPQ14011 172 aaKnown RBP8.51□□□□□ -1.05
RAB5B-203ENST00000546810 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
RAB5B-203ENST00000546810 PMCHL2Q9BQD1 86 aa8.51□□□□□ -1.05
RAB5B-203ENST00000546810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
RAB5B-203ENST00000546810 PKHD1L1Q86WI1 4243 aa8.5□□□□□ -1.05
RAB5B-203ENST00000546810 C3orf79P0CE67 100 aa8.5□□□□□ -1.05
RAB5B-203ENST00000546810 CHTF8P0CG12 524 aa8.5□□□□□ -1.05
RAB5B-203ENST00000546810 AKR1D1P51857 326 aa8.5□□□□□ -1.05
RAB5B-203ENST00000546810 HIST3H2BBQ8N257 126 aa8.5□□□□□ -1.05
RAB5B-203ENST00000546810 CIRBP-AS1Q8TBR5 109 aa8.5□□□□□ -1.05
RAB5B-203ENST00000546810 NDUFC2-KCTD14E9PQ53 114 aa8.49□□□□□ -1.05
RAB5B-203ENST00000546810 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
RAB5B-203ENST00000546810 LINC01545Q5VT33 79 aa8.49□□□□□ -1.05
RAB5B-203ENST00000546810 A0A087WYN8 130 aa8.48□□□□□ -1.05
RAB5B-203ENST00000546810 STPG4Q8N801 248 aa8.48□□□□□ -1.05
RAB5B-203ENST00000546810 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
RAB5B-203ENST00000546810 PANO1I0J062 215 aa8.47□□□□□ -1.05
RAB5B-203ENST00000546810 HNRNPA3P51991 378 aaKnown RBP8.47□□□□□ -1.05
RAB5B-203ENST00000546810 SNRPEP62304 92 aaKnown RBP8.47□□□□□ -1.05
RAB5B-203ENST00000546810 GAGE2EQ4V326 116 aa8.47□□□□□ -1.05
RAB5B-203ENST00000546810 C9orf116Q5BN46 136 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-203ENST00000546810 Q6ZRP5 223 aa8.47□□□□□ -1.05
RAB5B-203ENST00000546810 HIST1H2BLQ99880 126 aa8.47□□□□□ -1.05
RAB5B-203ENST00000546810 GAGE2DQ9UEU5 116 aa8.47□□□□□ -1.05
RAB5B-203ENST00000546810 LEPROTO15243 131 aa8.46□□□□□ -1.06
RAB5B-203ENST00000546810 RPL37AP61513 92 aaKnown RBP8.46□□□□□ -1.06
RAB5B-203ENST00000546810 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.06
RAB5B-203ENST00000546810 HERV-K104P63124 156 aa8.45□□□□□ -1.06
RAB5B-203ENST00000546810 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
RAB5B-203ENST00000546810 C5orf52A6NGY3 159 aa8.44□□□□□ -1.06
RAB5B-203ENST00000546810 LINC00587B1AMM8 73 aa8.44□□□□□ -1.06
RAB5B-203ENST00000546810 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
RAB5B-203ENST00000546810 COX17Q14061 63 aa8.44□□□□□ -1.06
RAB5B-203ENST00000546810 ZNF625Q96I27 306 aaPredicted RBP8.44□□□□□ -1.06
RAB5B-203ENST00000546810 ERG28Q9UKR5 140 aa8.44□□□□□ -1.06
RAB5B-203ENST00000546810 E9PLD3 99 aa8.43□□□□□ -1.06
RAB5B-203ENST00000546810 J3QQQ9 107 aa8.43□□□□□ -1.06
RAB5B-203ENST00000546810 PFN2P35080 140 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms