RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 RPL35AP18077 110 aaKnown RBP9.87□□□□□ -0.83
SRP54-202ENST00000546080 FHL2Q14192 279 aa9.87□□□□□ -0.83
SRP54-202ENST00000546080 Q8IZM0 81 aa9.87□□□□□ -0.83
SRP54-202ENST00000546080 ZNF843Q8N446 348 aa9.87□□□□□ -0.83
SRP54-202ENST00000546080 TRAV23DV6A0A075B6W5 121 aa9.86□□□□□ -0.83
SRP54-202ENST00000546080 LRRK2Q5S007 2527 aa9.86□□□□□ -0.83
SRP54-202ENST00000546080 UTP20O75691 2785 aaKnown RBP9.86□□□□□ -0.83
SRP54-202ENST00000546080 HELZ2Q9BYK8 2649 aaKnown RBP9.86□□□□□ -0.83
SRP54-202ENST00000546080 CCL24O00175 119 aa9.85□□□□□ -0.83
SRP54-202ENST00000546080 NANOS2P60321 138 aaKnown RBP9.85□□□□□ -0.83
SRP54-202ENST00000546080 OXTP01178 125 aa9.85□□□□□ -0.83
SRP54-202ENST00000546080 PLA2G2AP14555 144 aa9.85□□□□□ -0.83
SRP54-202ENST00000546080 ENHOQ6UWT2 76 aa9.85□□□□□ -0.83
SRP54-202ENST00000546080 UBL5Q9BZL1 73 aa9.85□□□□□ -0.83
SRP54-202ENST00000546080 WFDC10AQ9H1F0 79 aa9.85□□□□□ -0.83
SRP54-202ENST00000546080 PRR3P79522 188 aaKnown RBP9.84□□□□□ -0.83
SRP54-202ENST00000546080 FAM19A1Q7Z5A9 133 aa9.84□□□□□ -0.83
SRP54-202ENST00000546080 TENM4Q6N022 2769 aa9.84□□□□□ -0.83
SRP54-202ENST00000546080 CMC4P56277 68 aaPredicted RBP9.84□□□□□ -0.83
SRP54-202ENST00000546080 LYPD5Q6UWN5 251 aa9.83□□□□□ -0.84
SRP54-202ENST00000546080 NDUFC2O95298 119 aa9.82□□□□□ -0.84
SRP54-202ENST00000546080 RNASE1P07998 156 aaKnown RBP9.82□□□□□ -0.84
SRP54-202ENST00000546080 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
SRP54-202ENST00000546080 TRBV10-3A0A0K0K1G6 114 aa9.82□□□□□ -0.84
SRP54-202ENST00000546080 NDUFC2-KCTD14E9PQ53 114 aa9.81□□□□□ -0.84
SRP54-202ENST00000546080 CSNK1G2-AS1Q8NCQ2 148 aa9.81□□□□□ -0.84
SRP54-202ENST00000546080 DOPEY1Q5JWR5 2465 aa9.81□□□□□ -0.84
SRP54-202ENST00000546080 GCN1Q92616 2671 aaKnown RBP9.8□□□□□ -0.84
SRP54-202ENST00000546080 CENPEQ02224 2701 aa9.8□□□□□ -0.84
SRP54-202ENST00000546080 MXRA5Q9NR99 2828 aa9.8□□□□□ -0.84
SRP54-202ENST00000546080 A0A1B0GUV1 79 aa9.79□□□□□ -0.84
SRP54-202ENST00000546080 COX17Q14061 63 aa9.79□□□□□ -0.84
SRP54-202ENST00000546080 C6orf99Q4VX62 202 aa9.79□□□□□ -0.84
SRP54-202ENST00000546080 C20orf197Q8N268 126 aa9.79□□□□□ -0.84
SRP54-202ENST00000546080 ZANQ9Y493 2812 aa9.79□□□□□ -0.84
SRP54-202ENST00000546080 DEFB130BP0DP73 79 aa9.78□□□□□ -0.84
SRP54-202ENST00000546080 DEFB130AP0DP74 79 aa9.78□□□□□ -0.84
SRP54-202ENST00000546080 GYPEP15421 78 aa9.78□□□□□ -0.84
SRP54-202ENST00000546080 CR1P17927 2039 aa9.78□□□□□ -0.84
SRP54-202ENST00000546080 NBPF19A0A087WUL8 3843 aa9.77□□□□□ -0.85
SRP54-202ENST00000546080 C4orf26Q17RF5 130 aa9.77□□□□□ -0.85
SRP54-202ENST00000546080 RBM3P98179 157 aaKnown RBP9.77□□□□□ -0.85
SRP54-202ENST00000546080 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.85
SRP54-202ENST00000546080 FASNP49327 2511 aaKnown RBP9.77□□□□□ -0.85
SRP54-202ENST00000546080 C2CD3Q4AC94 2353 aa9.76□□□□□ -0.85
SRP54-202ENST00000546080 AKAP9Q99996 3911 aa9.76□□□□□ -0.85
SRP54-202ENST00000546080 Q5XG85 94 aa9.76□□□□□ -0.85
SRP54-202ENST00000546080 LINC00575Q6W349 94 aa9.76□□□□□ -0.85
SRP54-202ENST00000546080 Q6ZQT0 140 aa9.76□□□□□ -0.85
SRP54-202ENST00000546080 KIAA0087Q14695 138 aa9.75□□□□□ -0.85
SRP54-202ENST00000546080 USP9YO00507 2555 aaPredicted RBP9.75□□□□□ -0.85
SRP54-202ENST00000546080 FAM236DA0A1B0GTK5 79 aa9.75□□□□□ -0.85
SRP54-202ENST00000546080 DNAJC9-AS1A6NH13 148 aa9.75□□□□□ -0.85
SRP54-202ENST00000546080 ZNF561-AS1K7EIQ3 104 aa9.75□□□□□ -0.85
SRP54-202ENST00000546080 WIPF1O43516 503 aa9.75□□□□□ -0.85
SRP54-202ENST00000546080 FAM236CP0DP71 79 aa9.75□□□□□ -0.85
SRP54-202ENST00000546080 LAMTOR3Q9UHA4 124 aa9.75□□□□□ -0.85
SRP54-202ENST00000546080 C9orf116Q5BN46 136 aaPredicted RBP9.74□□□□□ -0.85
SRP54-202ENST00000546080 ANKRD17O75179 2603 aaKnown RBP9.74□□□□□ -0.85
SRP54-202ENST00000546080 A0A096LPF7 62 aa9.74□□□□□ -0.85
SRP54-202ENST00000546080 CD164L2Q6UWJ8 174 aa9.74□□□□□ -0.85
SRP54-202ENST00000546080 HRCT1Q6UXD1 115 aa9.74□□□□□ -0.85
SRP54-202ENST00000546080 NOTCH3Q9UM47 2321 aa9.73□□□□□ -0.85
SRP54-202ENST00000546080 BAHCC1Q9P281 2608 aa9.73□□□□□ -0.85
SRP54-202ENST00000546080 LOC110117498A0A087WWA1 95 aa9.73□□□□□ -0.85
SRP54-202ENST00000546080 IGLV1-51P01701 117 aa9.73□□□□□ -0.85
SRP54-202ENST00000546080 TRAV7A0A075B6U4 112 aa9.73□□□□□ -0.85
SRP54-202ENST00000546080 IGHV4-28A0A0C4DH34 117 aa9.73□□□□□ -0.85
SRP54-202ENST00000546080 BCE1O60756 84 aa9.73□□□□□ -0.85
SRP54-202ENST00000546080 LINC00269Q8N2A0 174 aa9.73□□□□□ -0.85
SRP54-202ENST00000546080 Q8NDZ9 215 aa9.73□□□□□ -0.85
SRP54-202ENST00000546080 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
SRP54-202ENST00000546080 CHCHD10Q8WYQ3 142 aaPredicted RBP9.72□□□□□ -0.85
SRP54-202ENST00000546080 IGLV10-54A0A075B6I4 117 aa9.71□□□□□ -0.85
SRP54-202ENST00000546080 LINC01547P58512 204 aaPredicted RBP9.71□□□□□ -0.86
SRP54-202ENST00000546080 HAMPP81172 84 aa9.71□□□□□ -0.86
SRP54-202ENST00000546080 DEFB113Q30KQ7 82 aa9.71□□□□□ -0.86
SRP54-202ENST00000546080 FBN2P35556 2912 aa9.7□□□□□ -0.86
SRP54-202ENST00000546080 Q6ZVQ6 151 aa9.7□□□□□ -0.86
SRP54-202ENST00000546080 LINC00482Q8N8I6 264 aa9.7□□□□□ -0.86
SRP54-202ENST00000546080 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
SRP54-202ENST00000546080 WNK1Q9H4A3 2382 aa9.7□□□□□ -0.86
SRP54-202ENST00000546080 M0R2N4 97 aa9.7□□□□□ -0.86
SRP54-202ENST00000546080 KRTAP10-9P60411 292 aa9.7□□□□□ -0.86
SRP54-202ENST00000546080 LINC00612Q8N6U2 182 aa9.7□□□□□ -0.86
SRP54-202ENST00000546080 CUBNO60494 3623 aa9.69□□□□□ -0.86
SRP54-202ENST00000546080 H7BZZ5 65 aa9.69□□□□□ -0.86
SRP54-202ENST00000546080 ANGP03950 147 aaKnown RBP9.69□□□□□ -0.86
SRP54-202ENST00000546080 REG3AQ06141 175 aa9.68□□□□□ -0.86
SRP54-202ENST00000546080 ESM1Q9NQ30 184 aa9.68□□□□□ -0.86
SRP54-202ENST00000546080 SERP1Q9Y6X1 66 aa9.68□□□□□ -0.86
SRP54-202ENST00000546080 MYO9AB2RTY4 2548 aa9.67□□□□□ -0.86
SRP54-202ENST00000546080 PDE6GP18545 87 aa9.67□□□□□ -0.86
SRP54-202ENST00000546080 Q6ZQY7 126 aa9.67□□□□□ -0.86
SRP54-202ENST00000546080 TRAV10A0A0B4J240 114 aa9.66□□□□□ -0.86
SRP54-202ENST00000546080 J3QKU1 62 aa9.66□□□□□ -0.86
SRP54-202ENST00000546080 CXCL6P80162 114 aa9.65□□□□□ -0.86
SRP54-202ENST00000546080 KLKP1Q107X0 134 aa9.65□□□□□ -0.86
SRP54-202ENST00000546080 Q8N3U1 123 aa9.65□□□□□ -0.86
SRP54-202ENST00000546080 H3BQ85 93 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms