RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 F8VRH5 84 aa9.68□□□□□ -0.86
CPSF7-225ENST00000545934 NPSP0C0P6 89 aa9.68□□□□□ -0.86
CPSF7-225ENST00000545934 TPRXLQ17RH7 258 aa9.68□□□□□ -0.86
CPSF7-225ENST00000545934 AKAP14Q86UN6 197 aa9.68□□□□□ -0.86
CPSF7-225ENST00000545934 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
CPSF7-225ENST00000545934 RETNLBQ9BQ08 111 aa9.68□□□□□ -0.86
CPSF7-225ENST00000545934 ALKBH7Q9BT30 221 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-225ENST00000545934 ANAPC11Q9NYG5 84 aa9.68□□□□□ -0.86
CPSF7-225ENST00000545934 CYSLTR1Q9Y271 337 aa9.68□□□□□ -0.86
CPSF7-225ENST00000545934 IGIPA6NJ69 53 aa9.67□□□□□ -0.86
CPSF7-225ENST00000545934 ATP5L2Q7Z4Y8 100 aa9.67□□□□□ -0.86
CPSF7-225ENST00000545934 VCX2Q9H322 139 aa9.67□□□□□ -0.86
CPSF7-225ENST00000545934 LAMTOR2Q9Y2Q5 125 aa9.67□□□□□ -0.86
CPSF7-225ENST00000545934 SRSF3P84103 164 aaKnown RBP9.66□□□□□ -0.86
CPSF7-225ENST00000545934 FAM229BQ4G0N7 80 aa9.66□□□□□ -0.86
CPSF7-225ENST00000545934 CDKN2A-AS1Q9UH64 79 aa9.66□□□□□ -0.86
CPSF7-225ENST00000545934 LOC389332A0A1B0GUA5 103 aa9.65□□□□□ -0.86
CPSF7-225ENST00000545934 RPL37AP8A6NKH3 93 aa9.65□□□□□ -0.86
CPSF7-225ENST00000545934 Q8N8P6 123 aa9.65□□□□□ -0.86
CPSF7-225ENST00000545934 IGLV5-37A0A075B6J1 123 aa9.64□□□□□ -0.87
CPSF7-225ENST00000545934 HERVK_113P63121 156 aa9.64□□□□□ -0.87
CPSF7-225ENST00000545934 LINC00304Q8N9R0 145 aa9.64□□□□□ -0.87
CPSF7-225ENST00000545934 MAP1LC3AQ9H492 121 aa9.64□□□□□ -0.87
CPSF7-225ENST00000545934 CXCL5P42830 114 aa9.63□□□□□ -0.87
CPSF7-225ENST00000545934 CTAG1AP78358 180 aa9.63□□□□□ -0.87
CPSF7-225ENST00000545934 CDIP1Q9H305 208 aa9.63□□□□□ -0.87
CPSF7-225ENST00000545934 K7EMI3 77 aa9.62□□□□□ -0.87
CPSF7-225ENST00000545934 SEC11AP67812 179 aa9.62□□□□□ -0.87
CPSF7-225ENST00000545934 ORMDL2Q53FV1 153 aa9.62□□□□□ -0.87
CPSF7-225ENST00000545934 PEA15Q15121 130 aa9.61□□□□□ -0.87
CPSF7-225ENST00000545934 IGLV7-46A0A075B6I9 117 aa9.6□□□□□ -0.87
CPSF7-225ENST00000545934 GAGE10A6NGK3 116 aa9.6□□□□□ -0.87
CPSF7-225ENST00000545934 SMIM1B2RUZ4 78 aa9.6□□□□□ -0.87
CPSF7-225ENST00000545934 PNRC1Q12796 327 aaPredicted RBP9.59□□□□□ -0.87
CPSF7-225ENST00000545934 TIMM17AQ99595 171 aa9.59□□□□□ -0.87
CPSF7-225ENST00000545934 UBE2AP49459 152 aa9.58□□□□□ -0.88
CPSF7-225ENST00000545934 PAPPA-AS1Q5QFB9 102 aa9.58□□□□□ -0.88
CPSF7-225ENST00000545934 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
CPSF7-225ENST00000545934 IGLV5-45A0A087WSX0 123 aa9.57□□□□□ -0.88
CPSF7-225ENST00000545934 PDZD11Q5EBL8 140 aa9.57□□□□□ -0.88
CPSF7-225ENST00000545934 COX7B2Q8TF08 81 aa9.56□□□□□ -0.88
CPSF7-225ENST00000545934 IGKV2D-26A0A0A0MRZ7 120 aa9.55□□□□□ -0.88
CPSF7-225ENST00000545934 TOMM6Q96B49 74 aa9.55□□□□□ -0.88
CPSF7-225ENST00000545934 NXT2Q9NPJ8 142 aaKnown RBP9.55□□□□□ -0.88
CPSF7-225ENST00000545934 hCG_2014768A0A024R1R8 64 aa9.54□□□□□ -0.88
CPSF7-225ENST00000545934 NKAPP1Q8N9T2 125 aa9.54□□□□□ -0.88
CPSF7-225ENST00000545934 IGKV2-28A0A075B6P5 120 aa9.53□□□□□ -0.88
CPSF7-225ENST00000545934 TINCRA0A1B0GVN0 87 aa9.53□□□□□ -0.88
CPSF7-225ENST00000545934 SCO1O75880 301 aa9.53□□□□□ -0.88
CPSF7-225ENST00000545934 IGKV2D-28P01615 120 aa9.53□□□□□ -0.88
CPSF7-225ENST00000545934 PPDPFQ9H3Y8 114 aa9.53□□□□□ -0.88
CPSF7-225ENST00000545934 G0S2P27469 103 aa9.52□□□□□ -0.89
CPSF7-225ENST00000545934 PRLHP81277 87 aa9.52□□□□□ -0.89
CPSF7-225ENST00000545934 ERASQ7Z444 233 aa9.52□□□□□ -0.89
CPSF7-225ENST00000545934 RAB5BP61020 215 aa9.51□□□□□ -0.89
CPSF7-225ENST00000545934 LCE2DQ5TA82 110 aaPredicted RBP9.5□□□□□ -0.89
CPSF7-225ENST00000545934 C3orf22Q8N5N4 141 aa9.5□□□□□ -0.89
CPSF7-225ENST00000545934 PLEKHB2Q96CS7 222 aa9.5□□□□□ -0.89
CPSF7-225ENST00000545934 TMEM126AQ9H061 195 aa9.5□□□□□ -0.89
CPSF7-225ENST00000545934 VPREB1P12018 145 aa9.49□□□□□ -0.89
CPSF7-225ENST00000545934 ADCYAP1P18509 176 aa9.49□□□□□ -0.89
CPSF7-225ENST00000545934 ANAPC16Q96DE5 110 aa9.49□□□□□ -0.89
CPSF7-225ENST00000545934 TMEM238C9JI98 176 aa9.48□□□□□ -0.89
CPSF7-225ENST00000545934 SPINK8P0C7L1 97 aa9.48□□□□□ -0.89
CPSF7-225ENST00000545934 FAM19A1Q7Z5A9 133 aa9.48□□□□□ -0.89
CPSF7-225ENST00000545934 M0R378 163 aa9.47□□□□□ -0.89
CPSF7-225ENST00000545934 FP248Q71RG6 208 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-225ENST00000545934 SCGB3A1Q96QR1 104 aa9.47□□□□□ -0.89
CPSF7-225ENST00000545934 KRTAP13-3Q3SY46 172 aa9.46□□□□□ -0.9
CPSF7-225ENST00000545934 ASB16-AS1Q495Z4 193 aa9.46□□□□□ -0.9
CPSF7-225ENST00000545934 SPAG11AQ6PDA7 123 aa9.46□□□□□ -0.9
CPSF7-225ENST00000545934 CST9LQ9H4G1 147 aa9.46□□□□□ -0.9
CPSF7-225ENST00000545934 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
CPSF7-225ENST00000545934 ATP5LO75964 103 aa9.45□□□□□ -0.9
CPSF7-225ENST00000545934 MT-ND4LP03901 98 aa9.45□□□□□ -0.9
CPSF7-225ENST00000545934 GNB1LQ9BYB4 327 aa9.45□□□□□ -0.9
CPSF7-225ENST00000545934 KRTAP4-1Q9BYQ7 146 aa9.45□□□□□ -0.9
CPSF7-225ENST00000545934 Q8NDZ9 215 aa9.44□□□□□ -0.9
CPSF7-225ENST00000545934 MRPL18Q9H0U6 180 aaKnown RBP9.44□□□□□ -0.9
CPSF7-225ENST00000545934 SND1-IT1Q9HBX3 110 aa9.44□□□□□ -0.9
CPSF7-225ENST00000545934 FSIP2Q5CZC0 6907 aa9.43□□□□□ -0.9
CPSF7-225ENST00000545934 LINC01549A6NIU2 74 aa9.43□□□□□ -0.9
CPSF7-225ENST00000545934 PFN2P35080 140 aa9.43□□□□□ -0.9
CPSF7-225ENST00000545934 CBLN2Q8IUK8 224 aa9.43□□□□□ -0.9
CPSF7-225ENST00000545934 IGLV5-39A0A0G2JS06 123 aa9.42□□□□□ -0.9
CPSF7-225ENST00000545934 LINC01547P58512 204 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-225ENST00000545934 PMVKQ15126 192 aa9.42□□□□□ -0.9
CPSF7-225ENST00000545934 KIAA1644Q3SXP7 199 aa9.42□□□□□ -0.9
CPSF7-225ENST00000545934 SPRR4Q96PI1 79 aa9.42□□□□□ -0.9
CPSF7-225ENST00000545934 RPL24P83731 157 aaKnown RBP9.41□□□□□ -0.9
CPSF7-225ENST00000545934 ERG28Q9UKR5 140 aa9.41□□□□□ -0.9
CPSF7-225ENST00000545934 H3BRM9 83 aa9.4□□□□□ -0.9
CPSF7-225ENST00000545934 COX17Q14061 63 aa9.4□□□□□ -0.9
CPSF7-225ENST00000545934 LINC00337Q8N6G1 96 aa9.39□□□□□ -0.91
CPSF7-225ENST00000545934 HIGD2AQ9BW72 106 aa9.39□□□□□ -0.91
CPSF7-225ENST00000545934 IGLC3P0DOY3 106 aa9.38□□□□□ -0.91
CPSF7-225ENST00000545934 CRCT1Q9UGL9 99 aa9.38□□□□□ -0.91
CPSF7-225ENST00000545934 RAB14P61106 215 aa9.36□□□□□ -0.91
CPSF7-225ENST00000545934 A0A1B0GVG6 124 aa9.35□□□□□ -0.91
CPSF7-225ENST00000545934 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms