RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 CUL9Q8IWT3 2517 aa8.81□□□□□ -1
COL4A6-209ENST00000545689 SMR3AQ99954 134 aa8.81□□□□□ -1
COL4A6-209ENST00000545689 RETNQ9HD89 108 aa8.81□□□□□ -1
COL4A6-209ENST00000545689 SPG11Q96JI7 2443 aa8.8□□□□□ -1
COL4A6-209ENST00000545689 LINC00337Q8N6G1 96 aa8.8□□□□□ -1
COL4A6-209ENST00000545689 IGLV9-49A0A0B4J1Y8 123 aa8.79□□□□□ -1
COL4A6-209ENST00000545689 K7ERS5 55 aa8.79□□□□□ -1
COL4A6-209ENST00000545689 ARHGAP32A7KAX9 2087 aa8.79□□□□□ -1
COL4A6-209ENST00000545689 FHL3Q13643 280 aa8.78□□□□□ -1
COL4A6-209ENST00000545689 CXCL6P80162 114 aa8.78□□□□□ -1
COL4A6-209ENST00000545689 IGHV3OR16-9A0A0B4J2B5 98 aa8.78□□□□□ -1
COL4A6-209ENST00000545689 A0A087WVE0 104 aa8.78□□□□□ -1
COL4A6-209ENST00000545689 CDIP1Q9H305 208 aa8.78□□□□□ -1
COL4A6-209ENST00000545689 SPINK6Q6UWN8 80 aa8.77□□□□□ -1.01
COL4A6-209ENST00000545689 M0R2N4 97 aa8.77□□□□□ -1.01
COL4A6-209ENST00000545689 BDP1A6H8Y1 2624 aa8.77□□□□□ -1.01
COL4A6-209ENST00000545689 Q8N3U1 123 aa8.77□□□□□ -1.01
COL4A6-209ENST00000545689 Q6ZVQ6 151 aa8.76□□□□□ -1.01
COL4A6-209ENST00000545689 HRCT1Q6UXD1 115 aa8.76□□□□□ -1.01
COL4A6-209ENST00000545689 SVIPQ8NHG7 77 aa8.76□□□□□ -1.01
COL4A6-209ENST00000545689 TRBV7-6A0A0J9YX20 115 aa8.75□□□□□ -1.01
COL4A6-209ENST00000545689 LINC00846Q9NV44 126 aa8.75□□□□□ -1.01
COL4A6-209ENST00000545689 H3BNG1 76 aa8.75□□□□□ -1.01
COL4A6-209ENST00000545689 BCE1O60756 84 aa8.75□□□□□ -1.01
COL4A6-209ENST00000545689 Q9BRP9 147 aa8.75□□□□□ -1.01
COL4A6-209ENST00000545689 TET2Q6N021 2002 aaPredicted RBP8.74□□□□□ -1.01
COL4A6-209ENST00000545689 Q6ZRU5 148 aa8.74□□□□□ -1.01
COL4A6-209ENST00000545689 CELA1Q9UNI1 258 aa8.74□□□□□ -1.01
COL4A6-209ENST00000545689 CSPG4Q6UVK1 2322 aa8.73□□□□□ -1.01
COL4A6-209ENST00000545689 A0A1B0GW54 56 aa8.73□□□□□ -1.01
COL4A6-209ENST00000545689 LINC01547P58512 204 aaPredicted RBP8.73□□□□□ -1.01
COL4A6-209ENST00000545689 LY6G6CO95867 125 aa8.73□□□□□ -1.01
COL4A6-209ENST00000545689 NAV2Q8IVL1 2488 aa8.73□□□□□ -1.01
COL4A6-209ENST00000545689 LINC01556Q5JQF7 62 aa8.73□□□□□ -1.01
COL4A6-209ENST00000545689 SBSPONQ8IVN8 264 aa8.73□□□□□ -1.01
COL4A6-209ENST00000545689 PRO0461Q9UI25 63 aa8.73□□□□□ -1.01
COL4A6-209ENST00000545689 A6NED7 52 aa8.72□□□□□ -1.01
COL4A6-209ENST00000545689 ATRXP46100 2492 aa8.72□□□□□ -1.01
COL4A6-209ENST00000545689 ESRGQ1W209 222 aa8.72□□□□□ -1.01
COL4A6-209ENST00000545689 WNK1Q9H4A3 2382 aa8.72□□□□□ -1.01
COL4A6-209ENST00000545689 LINC00208Q96KT6 92 aa8.71□□□□□ -1.02
COL4A6-209ENST00000545689 PTPRBP23467 1997 aa8.71□□□□□ -1.02
COL4A6-209ENST00000545689 SMCPP49901 116 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-209ENST00000545689 IGLV5-52A0A0A0MRZ9 124 aa8.69□□□□□ -1.02
COL4A6-209ENST00000545689 PRR4Q16378 134 aa8.69□□□□□ -1.02
COL4A6-209ENST00000545689 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
COL4A6-209ENST00000545689 A0A0U1RQV1 116 aa8.69□□□□□ -1.02
COL4A6-209ENST00000545689 TMEM254Q8TBM7 123 aa8.69□□□□□ -1.02
COL4A6-209ENST00000545689 COL27A1Q8IZC6 1860 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-209ENST00000545689 NHLRC4P0CG21 123 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-209ENST00000545689 FSHBP01225 129 aa8.68□□□□□ -1.02
COL4A6-209ENST00000545689 A0A087WSZ3 146 aa8.67□□□□□ -1.02
COL4A6-209ENST00000545689 PCSK5Q92824 1860 aa8.67□□□□□ -1.02
COL4A6-209ENST00000545689 C22orf24Q9Y442 160 aa8.67□□□□□ -1.02
COL4A6-209ENST00000545689 hDV103S1A0JD37 113 aa8.66□□□□□ -1.02
COL4A6-209ENST00000545689 X6R8D5 127 aa8.66□□□□□ -1.02
COL4A6-209ENST00000545689 LOC110117498A0A087WWA1 95 aa8.65□□□□□ -1.02
COL4A6-209ENST00000545689 SPATA3Q8NHX4 192 aa8.65□□□□□ -1.02
COL4A6-209ENST00000545689 IGHV6-1A0A0B4J1U7 121 aa8.65□□□□□ -1.03
COL4A6-209ENST00000545689 H0Y9P7 68 aa8.65□□□□□ -1.03
COL4A6-209ENST00000545689 ELOF1P60002 83 aaKnown RBP8.65□□□□□ -1.03
COL4A6-209ENST00000545689 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.03
COL4A6-209ENST00000545689 C6orf48Q9UBA6 75 aa8.64□□□□□ -1.03
COL4A6-209ENST00000545689 CRYGAP11844 174 aa8.64□□□□□ -1.03
COL4A6-209ENST00000545689 A8MTW9 85 aa8.64□□□□□ -1.03
COL4A6-209ENST00000545689 PRRC2AP48634 2157 aaKnown RBP8.64□□□□□ -1.03
COL4A6-209ENST00000545689 C1orf195Q5TG92 126 aa8.64□□□□□ -1.03
COL4A6-209ENST00000545689 CIRBP-AS1Q8TBR5 109 aa8.63□□□□□ -1.03
COL4A6-209ENST00000545689 SMCR5Q8TEV8 140 aa8.63□□□□□ -1.03
COL4A6-209ENST00000545689 C1orf134Q5TEV5 83 aa8.63□□□□□ -1.03
COL4A6-209ENST00000545689 EP400Q96L91 3159 aa8.63□□□□□ -1.03
COL4A6-209ENST00000545689 CACNA1AO00555 2505 aa8.63□□□□□ -1.03
COL4A6-209ENST00000545689 KIAA0087Q14695 138 aa8.62□□□□□ -1.03
COL4A6-209ENST00000545689 FAM218AQ96MZ4 157 aa8.62□□□□□ -1.03
COL4A6-209ENST00000545689 GVQW2A0A096LPI5 108 aaPredicted RBP8.61□□□□□ -1.03
COL4A6-209ENST00000545689 LITAFQ99732 161 aa8.61□□□□□ -1.03
COL4A6-209ENST00000545689 LIMD2Q9BT23 127 aa8.6□□□□□ -1.03
COL4A6-209ENST00000545689 AGRNO00468 2067 aa8.6□□□□□ -1.03
COL4A6-209ENST00000545689 Q6ZQT0 140 aa8.59□□□□□ -1.03
COL4A6-209ENST00000545689 IGF2RP11717 2491 aa8.59□□□□□ -1.03
COL4A6-209ENST00000545689 SORL1Q92673 2214 aa8.59□□□□□ -1.03
COL4A6-209ENST00000545689 PRLHP81277 87 aa8.59□□□□□ -1.03
COL4A6-209ENST00000545689 PTPN13Q12923 2485 aa8.59□□□□□ -1.04
COL4A6-209ENST00000545689 LINC00167Q96N53 147 aa8.58□□□□□ -1.04
COL4A6-209ENST00000545689 HIVEP3Q5T1R4 2406 aa8.58□□□□□ -1.04
COL4A6-209ENST00000545689 TP53AIP1Q9HCN2 124 aa8.57□□□□□ -1.04
COL4A6-209ENST00000545689 NOTCH2Q04721 2471 aa8.56□□□□□ -1.04
COL4A6-209ENST00000545689 Q8NAQ8 132 aa8.56□□□□□ -1.04
COL4A6-209ENST00000545689 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
COL4A6-209ENST00000545689 Q9UF83 564 aa8.56□□□□□ -1.04
COL4A6-209ENST00000545689 H3BPC8 53 aa8.55□□□□□ -1.04
COL4A6-209ENST00000545689 Q6ZRX8 168 aa8.55□□□□□ -1.04
COL4A6-209ENST00000545689 SMIM29Q86T20 159 aa8.55□□□□□ -1.04
COL4A6-209ENST00000545689 NCOR2Q9Y618 2525 aa8.54□□□□□ -1.04
COL4A6-209ENST00000545689 C1orf64Q8NEQ6 169 aa8.54□□□□□ -1.04
COL4A6-209ENST00000545689 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
COL4A6-209ENST00000545689 TLN1Q9Y490 2541 aaKnown RBP8.53□□□□□ -1.04
COL4A6-209ENST00000545689 Q8NBF4 154 aa8.53□□□□□ -1.04
COL4A6-209ENST00000545689 PIEZO2Q9H5I5 2752 aa8.53□□□□□ -1.04
COL4A6-209ENST00000545689 DEFB116Q30KQ4 102 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms