RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 AMELXQ99217 191 aa11□□□□□ -0.65
CHD4-210ENST00000544040 CDSNQ15517 529 aa10.99□□□□□ -0.65
CHD4-210ENST00000544040 DSCAMO60469 2012 aa10.99□□□□□ -0.65
CHD4-210ENST00000544040 PLA2G2AP14555 144 aa10.99□□□□□ -0.65
CHD4-210ENST00000544040 C1orf64Q8NEQ6 169 aa10.99□□□□□ -0.65
CHD4-210ENST00000544040 SMIM29Q86T20 159 aa10.98□□□□□ -0.65
CHD4-210ENST00000544040 IGKV2D-30A0A075B6S6 120 aa10.98□□□□□ -0.65
CHD4-210ENST00000544040 IGKV2-30P06310 120 aa10.98□□□□□ -0.65
CHD4-210ENST00000544040 A0A096LNJ9 63 aa10.97□□□□□ -0.65
CHD4-210ENST00000544040 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
CHD4-210ENST00000544040 C2orf48Q96LS8 159 aa10.94□□□□□ -0.66
CHD4-210ENST00000544040 Q6ZRU5 148 aa10.94□□□□□ -0.66
CHD4-210ENST00000544040 ATRXP46100 2492 aa10.94□□□□□ -0.66
CHD4-210ENST00000544040 LINC00337Q8N6G1 96 aa10.93□□□□□ -0.66
CHD4-210ENST00000544040 hDV103S1A0JD37 113 aa10.93□□□□□ -0.66
CHD4-210ENST00000544040 SERTAD4-AS1Q5TG53 156 aa10.93□□□□□ -0.66
CHD4-210ENST00000544040 CDIP1Q9H305 208 aa10.93□□□□□ -0.66
CHD4-210ENST00000544040 C4orf26Q17RF5 130 aa10.92□□□□□ -0.66
CHD4-210ENST00000544040 A0A1B0GU69 56 aa10.91□□□□□ -0.66
CHD4-210ENST00000544040 EML5Q05BV3 1969 aa10.91□□□□□ -0.66
CHD4-210ENST00000544040 PRRC2AP48634 2157 aaKnown RBP10.91□□□□□ -0.66
CHD4-210ENST00000544040 IGLV1-51P01701 117 aa10.91□□□□□ -0.66
CHD4-210ENST00000544040 LYPD5Q6UWN5 251 aa10.91□□□□□ -0.66
CHD4-210ENST00000544040 KIAA0087Q14695 138 aa10.9□□□□□ -0.66
CHD4-210ENST00000544040 SMCR5Q8TEV8 140 aa10.9□□□□□ -0.66
CHD4-210ENST00000544040 ATG2AQ2TAZ0 1938 aa10.9□□□□□ -0.67
CHD4-210ENST00000544040 PLA2G1BP04054 148 aaKnown RBP10.89□□□□□ -0.67
CHD4-210ENST00000544040 SPAG11AQ6PDA7 123 aa10.89□□□□□ -0.67
CHD4-210ENST00000544040 CXCL6P80162 114 aa10.88□□□□□ -0.67
CHD4-210ENST00000544040 KRTAP10-9P60411 292 aa10.88□□□□□ -0.67
CHD4-210ENST00000544040 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
CHD4-210ENST00000544040 PRO0628Q9UI54 55 aa10.87□□□□□ -0.67
CHD4-210ENST00000544040 LIMD2Q9BT23 127 aa10.87□□□□□ -0.67
CHD4-210ENST00000544040 SPATA3Q8NHX4 192 aa10.86□□□□□ -0.67
CHD4-210ENST00000544040 A0A1B0GUV1 79 aa10.84□□□□□ -0.67
CHD4-210ENST00000544040 C1orf134Q5TEV5 83 aa10.84□□□□□ -0.67
CHD4-210ENST00000544040 IGLV8-61A0A075B6I0 122 aa10.84□□□□□ -0.67
CHD4-210ENST00000544040 CSPG4Q6UVK1 2322 aa10.84□□□□□ -0.67
CHD4-210ENST00000544040 EXPH5Q8NEV8 1989 aa10.84□□□□□ -0.67
CHD4-210ENST00000544040 TECTAO75443 2155 aa10.83□□□□□ -0.68
CHD4-210ENST00000544040 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
CHD4-210ENST00000544040 FSHBP01225 129 aa10.82□□□□□ -0.68
CHD4-210ENST00000544040 SPG11Q96JI7 2443 aa10.82□□□□□ -0.68
CHD4-210ENST00000544040 Q8N2B8 174 aa10.81□□□□□ -0.68
CHD4-210ENST00000544040 OTOGLQ3ZCN5 2332 aa10.8□□□□□ -0.68
CHD4-210ENST00000544040 F8WDY8 70 aa10.8□□□□□ -0.68
CHD4-210ENST00000544040 RAI1Q7Z5J4 1906 aaPredicted RBP10.8□□□□□ -0.68
CHD4-210ENST00000544040 MOBPQ13875 183 aa10.79□□□□□ -0.68
CHD4-210ENST00000544040 COX8CQ7Z4L0 72 aa10.79□□□□□ -0.68
CHD4-210ENST00000544040 ACYP2P14621 99 aa10.79□□□□□ -0.68
CHD4-210ENST00000544040 C6orf48Q9UBA6 75 aa10.78□□□□□ -0.68
CHD4-210ENST00000544040 MUC6Q6W4X9 2439 aa10.78□□□□□ -0.68
CHD4-210ENST00000544040 FAM218AQ96MZ4 157 aa10.78□□□□□ -0.68
CHD4-210ENST00000544040 SMCPP49901 116 aaPredicted RBP10.77□□□□□ -0.68
CHD4-210ENST00000544040 ANKHD1Q8IWZ3 2542 aaKnown RBP10.77□□□□□ -0.69
CHD4-210ENST00000544040 SPINT4Q6UDR6 99 aa10.77□□□□□ -0.69
CHD4-210ENST00000544040 LINC01561Q8N1V8 128 aa10.76□□□□□ -0.69
CHD4-210ENST00000544040 SONP18583 2426 aaKnown RBP10.76□□□□□ -0.69
CHD4-210ENST00000544040 LTBP2Q14767 1821 aa10.75□□□□□ -0.69
CHD4-210ENST00000544040 PTPN13Q12923 2485 aa10.75□□□□□ -0.69
CHD4-210ENST00000544040 ATP11AUNQ6ZP68 121 aa10.75□□□□□ -0.69
CHD4-210ENST00000544040 LINC00167Q96N53 147 aa10.74□□□□□ -0.69
CHD4-210ENST00000544040 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
CHD4-210ENST00000544040 HIVEP3Q5T1R4 2406 aa10.73□□□□□ -0.69
CHD4-210ENST00000544040 C16orf95Q9H693 158 aa10.73□□□□□ -0.69
CHD4-210ENST00000544040 AGRNO00468 2067 aa10.73□□□□□ -0.69
CHD4-210ENST00000544040 IGLV5-39A0A0G2JS06 123 aa10.72□□□□□ -0.69
CHD4-210ENST00000544040 COL4A4P53420 1690 aaPredicted RBP10.72□□□□□ -0.69
CHD4-210ENST00000544040 KIF25-AS1Q9Y6Z4 181 aa10.71□□□□□ -0.69
CHD4-210ENST00000544040 A0A1W2PPR1 153 aa10.71□□□□□ -0.69
CHD4-210ENST00000544040 CEP192Q8TEP8 1941 aa10.71□□□□□ -0.7
CHD4-210ENST00000544040 TP53AIP1Q9HCN2 124 aa10.7□□□□□ -0.7
CHD4-210ENST00000544040 TM2D3Q9BRN9 247 aa10.7□□□□□ -0.7
CHD4-210ENST00000544040 C11orf72Q8NBR9 251 aa10.69□□□□□ -0.7
CHD4-210ENST00000544040 NOTCH2Q04721 2471 aa10.69□□□□□ -0.7
CHD4-210ENST00000544040 CHTF8P0CG12 524 aa10.69□□□□□ -0.7
CHD4-210ENST00000544040 MUC4Q99102 2169 aa10.68□□□□□ -0.7
CHD4-210ENST00000544040 BDP1A6H8Y1 2624 aa10.68□□□□□ -0.7
CHD4-210ENST00000544040 C8orf87E5RJ46 101 aa10.67□□□□□ -0.7
CHD4-210ENST00000544040 PHF5AQ7RTV0 110 aaKnown RBP10.67□□□□□ -0.7
CHD4-210ENST00000544040 IGHV3OR16-9A0A0B4J2B5 98 aa10.67□□□□□ -0.7
CHD4-210ENST00000544040 Q6ZQT0 140 aa10.67□□□□□ -0.7
CHD4-210ENST00000544040 FHL3Q13643 280 aa10.67□□□□□ -0.7
CHD4-210ENST00000544040 LINC00476Q8WZB0 136 aa10.66□□□□□ -0.7
CHD4-210ENST00000544040 ST20-AS1Q8NBB2 130 aa10.66□□□□□ -0.7
CHD4-210ENST00000544040 LINC01546A6NGU7 62 aa10.66□□□□□ -0.7
CHD4-210ENST00000544040 ELOF1P60002 83 aaKnown RBP10.65□□□□□ -0.7
CHD4-210ENST00000544040 MDFIQ99750 246 aa10.65□□□□□ -0.7
CHD4-210ENST00000544040 C2CD3Q4AC94 2353 aa10.65□□□□□ -0.71
CHD4-210ENST00000544040 COL5A1P20908 1838 aaPredicted RBP10.64□□□□□ -0.71
CHD4-210ENST00000544040 NAV3Q8IVL0 2385 aa10.64□□□□□ -0.71
CHD4-210ENST00000544040 PRO0461Q9UI25 63 aa10.64□□□□□ -0.71
CHD4-210ENST00000544040 LINC00313P59037 77 aa10.64□□□□□ -0.71
CHD4-210ENST00000544040 ACACBO00763 2458 aa10.63□□□□□ -0.71
CHD4-210ENST00000544040 SSBP3-AS1Q7Z2R9 100 aa10.63□□□□□ -0.71
CHD4-210ENST00000544040 PTPRSQ13332 1948 aa10.62□□□□□ -0.71
CHD4-210ENST00000544040 LINC00315P59091 139 aa10.61□□□□□ -0.71
CHD4-210ENST00000544040 CUL9Q8IWT3 2517 aa10.61□□□□□ -0.71
CHD4-210ENST00000544040 TRAV22A0A0B4J277 110 aa10.6□□□□□ -0.71
CHD4-210ENST00000544040 RPS28P62857 69 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms