RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 HERVK_113P63121 156 aa8□□□□□ -1.13
TNFRSF1A-215ENST00000543359 C1orf137Q5JT78 98 aa8□□□□□ -1.13
TNFRSF1A-215ENST00000543359 PAPPA-AS1Q5QFB9 102 aa8□□□□□ -1.13
TNFRSF1A-215ENST00000543359 Q8IZM0 81 aa8□□□□□ -1.13
TNFRSF1A-215ENST00000543359 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
TNFRSF1A-215ENST00000543359 SEC11AP67812 179 aa7.99□□□□□ -1.13
TNFRSF1A-215ENST00000543359 FAM19A5Q7Z5A7 132 aaPredicted RBP7.99□□□□□ -1.13
TNFRSF1A-215ENST00000543359 PACRGQ96M98 296 aaPredicted RBP7.99□□□□□ -1.13
TNFRSF1A-215ENST00000543359 IGLV5-45A0A087WSX0 123 aa7.98□□□□□ -1.13
TNFRSF1A-215ENST00000543359 IGLV7-43P04211 117 aa7.98□□□□□ -1.13
TNFRSF1A-215ENST00000543359 RHEBQ15382 184 aa7.98□□□□□ -1.13
TNFRSF1A-215ENST00000543359 COX19Q49B96 90 aa7.98□□□□□ -1.13
TNFRSF1A-215ENST00000543359 C6orf226Q5I0X4 101 aa7.98□□□□□ -1.13
TNFRSF1A-215ENST00000543359 MRPL18Q9H0U6 180 aaKnown RBP7.98□□□□□ -1.13
TNFRSF1A-215ENST00000543359 CST9LQ9H4G1 147 aa7.98□□□□□ -1.13
TNFRSF1A-215ENST00000543359 TINCRA0A1B0GVN0 87 aa7.97□□□□□ -1.13
TNFRSF1A-215ENST00000543359 FABP9Q0Z7S8 132 aa7.97□□□□□ -1.13
TNFRSF1A-215ENST00000543359 RPS10P5Q9NQ39 176 aa7.97□□□□□ -1.13
TNFRSF1A-215ENST00000543359 TOMM7Q9P0U1 55 aa7.97□□□□□ -1.13
TNFRSF1A-215ENST00000543359 LPAP08519 4548 aa7.96□□□□□ -1.13
TNFRSF1A-215ENST00000543359 SMIM1B2RUZ4 78 aa7.96□□□□□ -1.14
TNFRSF1A-215ENST00000543359 PRSS2P07478 247 aa7.96□□□□□ -1.14
TNFRSF1A-215ENST00000543359 CKS1BP61024 79 aa7.96□□□□□ -1.14
TNFRSF1A-215ENST00000543359 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.14
TNFRSF1A-215ENST00000543359 GEMIN7Q9H840 131 aaKnown RBP7.96□□□□□ -1.14
TNFRSF1A-215ENST00000543359 A0A096LNJ9 63 aa7.95□□□□□ -1.14
TNFRSF1A-215ENST00000543359 LINC01549A6NIU2 74 aa7.95□□□□□ -1.14
TNFRSF1A-215ENST00000543359 M0QXV9 152 aa7.95□□□□□ -1.14
TNFRSF1A-215ENST00000543359 F8VRH5 84 aa7.94□□□□□ -1.14
TNFRSF1A-215ENST00000543359 ATP6V1G1O75348 118 aa7.94□□□□□ -1.14
TNFRSF1A-215ENST00000543359 PDZD11Q5EBL8 140 aa7.94□□□□□ -1.14
TNFRSF1A-215ENST00000543359 LINC00469Q8N7U9 141 aa7.94□□□□□ -1.14
TNFRSF1A-215ENST00000543359 PMVKQ15126 192 aa7.93□□□□□ -1.14
TNFRSF1A-215ENST00000543359 FA2HQ7L5A8 372 aa7.93□□□□□ -1.14
TNFRSF1A-215ENST00000543359 C18orf32Q8TCD1 76 aa7.93□□□□□ -1.14
TNFRSF1A-215ENST00000543359 XAGE1AQ9HD64 81 aa7.93□□□□□ -1.14
TNFRSF1A-215ENST00000543359 C22orf24Q9Y442 160 aa7.93□□□□□ -1.14
TNFRSF1A-215ENST00000543359 CXCL5P42830 114 aa7.92□□□□□ -1.14
TNFRSF1A-215ENST00000543359 COX7B2Q8TF08 81 aa7.92□□□□□ -1.14
TNFRSF1A-215ENST00000543359 DIRC1Q969H9 104 aa7.92□□□□□ -1.14
TNFRSF1A-215ENST00000543359 H0Y9J4 135 aa7.91□□□□□ -1.14
TNFRSF1A-215ENST00000543359 KRTAP1-4P0C5Y4 121 aa7.91□□□□□ -1.14
TNFRSF1A-215ENST00000543359 SMCO4Q9NRQ5 59 aa7.91□□□□□ -1.14
TNFRSF1A-215ENST00000543359 RNF213Q63HN8 5207 aa7.91□□□□□ -1.14
TNFRSF1A-215ENST00000543359 APOC3P02656 99 aa7.9□□□□□ -1.14
TNFRSF1A-215ENST00000543359 SPINK8P0C7L1 97 aa7.9□□□□□ -1.14
TNFRSF1A-215ENST00000543359 LINC00614P0C842 121 aa7.9□□□□□ -1.14
TNFRSF1A-215ENST00000543359 IGLC3P0DOY3 106 aa7.9□□□□□ -1.14
TNFRSF1A-215ENST00000543359 UBE2BP63146 152 aa7.9□□□□□ -1.14
TNFRSF1A-215ENST00000543359 NDUFA5Q16718 116 aa7.9□□□□□ -1.14
TNFRSF1A-215ENST00000543359 YPEL4Q96NS1 127 aa7.9□□□□□ -1.14
TNFRSF1A-215ENST00000543359 TRAPPC1Q9Y5R8 145 aa7.9□□□□□ -1.14
TNFRSF1A-215ENST00000543359 IGLV5-39A0A0G2JS06 123 aa7.89□□□□□ -1.15
TNFRSF1A-215ENST00000543359 PRR26Q8N8Z3 221 aa7.89□□□□□ -1.15
TNFRSF1A-215ENST00000543359 TP73-AS1Q9UF72 201 aa7.89□□□□□ -1.15
TNFRSF1A-215ENST00000543359 HBDP02042 147 aa7.87□□□□□ -1.15
TNFRSF1A-215ENST00000543359 PMCHL1Q16048 86 aa7.87□□□□□ -1.15
TNFRSF1A-215ENST00000543359 LBHQ53QV2 105 aaPredicted RBP7.87□□□□□ -1.15
TNFRSF1A-215ENST00000543359 SVBPQ8N300 66 aa7.87□□□□□ -1.15
TNFRSF1A-215ENST00000543359 ZNF861PO60384 105 aa7.86□□□□□ -1.15
TNFRSF1A-215ENST00000543359 SNAPINO95295 136 aa7.86□□□□□ -1.15
TNFRSF1A-215ENST00000543359 ZNF22P17026 224 aaPredicted RBP7.86□□□□□ -1.15
TNFRSF1A-215ENST00000543359 MRPL55Q7Z7F7 128 aaKnown RBP7.86□□□□□ -1.15
TNFRSF1A-215ENST00000543359 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
TNFRSF1A-215ENST00000543359 H3BRM9 83 aa7.85□□□□□ -1.15
TNFRSF1A-215ENST00000543359 NUPR1O60356 82 aa7.85□□□□□ -1.15
TNFRSF1A-215ENST00000543359 RAB5BP61020 215 aa7.85□□□□□ -1.15
TNFRSF1A-215ENST00000543359 LINC00167Q96N53 147 aa7.85□□□□□ -1.15
TNFRSF1A-215ENST00000543359 IGLV1-50A0A075B6I6 118 aa7.84□□□□□ -1.15
TNFRSF1A-215ENST00000543359 S100A1P23297 94 aa7.84□□□□□ -1.15
TNFRSF1A-215ENST00000543359 NDUFA6P56556 154 aa7.84□□□□□ -1.15
TNFRSF1A-215ENST00000543359 SLC7A5P1Q8MH63 180 aa7.84□□□□□ -1.15
TNFRSF1A-215ENST00000543359 C11orf86A6NJI1 115 aa7.83□□□□□ -1.16
TNFRSF1A-215ENST00000543359 ATP5LO75964 103 aa7.82□□□□□ -1.16
TNFRSF1A-215ENST00000543359 BAGE3Q86Y29 109 aa7.82□□□□□ -1.16
TNFRSF1A-215ENST00000543359 RPL37AP8A6NKH3 93 aa7.81□□□□□ -1.16
TNFRSF1A-215ENST00000543359 BCE1O60756 84 aa7.81□□□□□ -1.16
TNFRSF1A-215ENST00000543359 KRTAP13-1Q8IUC0 172 aa7.8□□□□□ -1.16
TNFRSF1A-215ENST00000543359 GAGE10A6NGK3 116 aa7.79□□□□□ -1.16
TNFRSF1A-215ENST00000543359 SCO1O75880 301 aa7.79□□□□□ -1.16
TNFRSF1A-215ENST00000543359 PFN2P35080 140 aa7.79□□□□□ -1.16
TNFRSF1A-215ENST00000543359 Q8NDZ9 215 aa7.79□□□□□ -1.16
TNFRSF1A-215ENST00000543359 CHCHD1Q96BP2 118 aaKnown RBP7.79□□□□□ -1.16
TNFRSF1A-215ENST00000543359 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
TNFRSF1A-215ENST00000543359 SND1-IT1Q9HBX3 110 aa7.79□□□□□ -1.16
TNFRSF1A-215ENST00000543359 ERG28Q9UKR5 140 aa7.79□□□□□ -1.16
TNFRSF1A-215ENST00000543359 VPREB1P12018 145 aa7.78□□□□□ -1.16
TNFRSF1A-215ENST00000543359 COX17Q14061 63 aa7.78□□□□□ -1.16
TNFRSF1A-215ENST00000543359 CHTOPQ9Y3Y2 248 aaKnown RBP7.78□□□□□ -1.16
TNFRSF1A-215ENST00000543359 TRAV12-1A0A0B4J245 112 aa7.77□□□□□ -1.17
TNFRSF1A-215ENST00000543359 RPL28P46779 137 aaKnown RBP7.77□□□□□ -1.17
TNFRSF1A-215ENST00000543359 TMEM170BQ5T4T1 132 aa7.77□□□□□ -1.17
TNFRSF1A-215ENST00000543359 CBLN2Q8IUK8 224 aa7.77□□□□□ -1.17
TNFRSF1A-215ENST00000543359 A0A087X002 238 aa7.76□□□□□ -1.17
TNFRSF1A-215ENST00000543359 TMEM223A0PJW6 202 aa7.76□□□□□ -1.17
TNFRSF1A-215ENST00000543359 RPL13AP40429 203 aaKnown RBP7.76□□□□□ -1.17
TNFRSF1A-215ENST00000543359 NKAPP1Q8N9T2 125 aa7.76□□□□□ -1.17
TNFRSF1A-215ENST00000543359 IFI27L1Q96BM0 104 aa7.76□□□□□ -1.17
TNFRSF1A-215ENST00000543359 LINC00310P59036 64 aa7.75□□□□□ -1.17
TNFRSF1A-215ENST00000543359 IGKV2-28A0A075B6P5 120 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms