RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 SFT2D1Q8WV19 159 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 C11orf52Q96A22 123 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 SMIM12Q96EX1 92 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 GEMIN7Q9H840 131 aaKnown RBP1.61□□□□□ -2.15
CHD4-209ENST00000542717 ST20Q9HBF5 79 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 BIN3Q9NQY0 253 aa1.61□□□□□ -2.15
CHD4-209ENST00000542717 A0A1B0GV50 99 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 VCYO14598 125 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 UPK1BO75841 260 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 FCER1GP30273 86 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 GNG4P50150 75 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 CCL20P78556 96 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 Q5BKY6 102 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 C2orf82Q6UX34 121 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 LINC00299Q6ZSB3 139 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 SSBP3-AS1Q7Z2R9 100 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 KCNRGQ8N5I3 272 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 NUDT10Q8NFP7 164 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 MBD3L1Q8WWY6 194 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 TMEM18Q96B42 140 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 NUDT11Q96G61 164 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 LIMD2Q9BT23 127 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 TIMM21Q9BVV7 248 aa1.6□□□□□ -2.15
CHD4-209ENST00000542717 TGIF2-C20orf24A0A0A6YYL0 155 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 IFITM10A6NMD0 228 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 UMAD1C9J7I0 102 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 TMEM238C9JI98 176 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 PPP1R17O96001 155 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 SUMO2P61956 95 aaKnown RBP1.59□□□□□ -2.15
CHD4-209ENST00000542717 HBBP68871 147 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 MRPS36P82909 103 aaKnown RBP1.59□□□□□ -2.15
CHD4-209ENST00000542717 IFITM3Q01628 133 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 C9orf153Q5TBE3 101 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 GAGE2AQ6NT46 116 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 LINC01561Q8N1V8 128 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 FAM213BQ8TBF2 198 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 S100ZQ8WXG8 99 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 FAM104AQ969W3 186 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 TMEM126AQ9H061 195 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 TMEM191AQ9H0A3 160 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 MANBALQ9NQG1 85 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 GNG13Q9P2W3 67 aa1.59□□□□□ -2.15
CHD4-209ENST00000542717 CHTOPQ9Y3Y2 248 aaKnown RBP1.59□□□□□ -2.15
CHD4-209ENST00000542717 TRBV20OR9-2A0A075B6H5 130 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 IGLV5-37A0A075B6J1 123 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 PPP1R2P9O14990 202 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 TCAPO15273 167 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 PDE6DO43924 150 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 GHRHP01286 108 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 PRSS2P07478 247 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 GIPP09681 153 aaPredicted RBP1.58□□□□□ -2.16
CHD4-209ENST00000542717 H2AFB1P0C5Y9 115 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 RAB4AP20338 218 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 CKS1BP61024 79 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 RPL39P62891 51 aaKnown RBP1.58□□□□□ -2.16
CHD4-209ENST00000542717 KIAA1644Q3SXP7 199 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 HRCT1Q6UXD1 115 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 AMN1Q8IY45 258 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 NRACQ8N912 160 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 BORCS7Q96B45 105 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 SPANXA1Q9NS26 97 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 MED9Q9NWA0 146 aa1.58□□□□□ -2.16
CHD4-209ENST00000542717 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 A0A1B0GUT8 65 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 A8MWL6 223 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 SMKR1H3BMG3 65 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 K7EN84 100 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 ARPC5O15511 151 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 GATCO43716 136 aaKnown RBP1.57□□□□□ -2.16
CHD4-209ENST00000542717 SCO1O75880 301 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 IFI27P40305 119 aaPredicted RBP1.57□□□□□ -2.16
CHD4-209ENST00000542717 CT83Q5H943 113 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 C6orf226Q5I0X4 101 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 Q6ZN92 141 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 FAM19A3Q7Z5A8 133 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 AKAP14Q86UN6 197 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 Q8IZM0 81 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 OCC1Q8TAD7 63 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 C20orf78Q9BR46 151 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 ALKBH7Q9BT30 221 aaPredicted RBP1.57□□□□□ -2.16
CHD4-209ENST00000542717 TOMM7Q9P0U1 55 aa1.57□□□□□ -2.16
CHD4-209ENST00000542717 IGLV4-3A0A075B6K6 122 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 TRBV24-1A0A075B6N3 115 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 HIGD1CA8MV81 97 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 A8MWP4 228 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 F8VRH5 84 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 TEX46H3BTG2 121 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 CXCL5P42830 114 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 RIGQ13278 110 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 TEX43Q6ZNM6 134 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 C2orf88Q9BSF0 95 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 IMUPQ9GZP8 106 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 NDUFA13Q9P0J0 144 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 RBM12B-AS1Q9P1G2 102 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 PYGO1Q9Y3Y4 419 aa1.56□□□□□ -2.16
CHD4-209ENST00000542717 KANTRA0A1W2PQU2 76 aa1.55□□□□□ -2.16
CHD4-209ENST00000542717 LINC00862A6NCI5 91 aa1.55□□□□□ -2.16
CHD4-209ENST00000542717 M0R378 163 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms