RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 Q8IZM0 81 aa12.39□□□□□ -0.43
DDB1-220ENST00000542337 SEC11CQ9BY50 192 aa12.39□□□□□ -0.43
DDB1-220ENST00000542337 GNB1LQ9BYB4 327 aa12.39□□□□□ -0.43
DDB1-220ENST00000542337 COX19Q49B96 90 aa12.38□□□□□ -0.43
DDB1-220ENST00000542337 CDKN2A-AS1Q9UH64 79 aa12.37□□□□□ -0.43
DDB1-220ENST00000542337 UBR4Q5T4S7 5183 aa12.36□□□□□ -0.43
DDB1-220ENST00000542337 IFITM2Q01629 132 aa12.35□□□□□ -0.43
DDB1-220ENST00000542337 C9orf129Q5T035 196 aaKnown RBP12.35□□□□□ -0.43
DDB1-220ENST00000542337 LINC00469Q8N7U9 141 aa12.35□□□□□ -0.43
DDB1-220ENST00000542337 F8VRH5 84 aa12.34□□□□□ -0.43
DDB1-220ENST00000542337 CXCL5P42830 114 aa12.34□□□□□ -0.43
DDB1-220ENST00000542337 SMCO4Q9NRQ5 59 aa12.34□□□□□ -0.43
DDB1-220ENST00000542337 FA2HQ7L5A8 372 aa12.33□□□□□ -0.44
DDB1-220ENST00000542337 COMMD7Q86VX2 200 aa12.33□□□□□ -0.44
DDB1-220ENST00000542337 FABP9Q0Z7S8 132 aa12.32□□□□□ -0.44
DDB1-220ENST00000542337 ODF1Q14990 250 aa12.32□□□□□ -0.44
DDB1-220ENST00000542337 LBHQ53QV2 105 aaPredicted RBP12.32□□□□□ -0.44
DDB1-220ENST00000542337 KRTAP11-1Q8IUC1 163 aa12.32□□□□□ -0.44
DDB1-220ENST00000542337 KRTAP7-1Q8IUC3 87 aa12.32□□□□□ -0.44
DDB1-220ENST00000542337 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
DDB1-220ENST00000542337 H0Y9J4 135 aa12.31□□□□□ -0.44
DDB1-220ENST00000542337 LINC01546A6NGU7 62 aa12.3□□□□□ -0.44
DDB1-220ENST00000542337 PDZD11Q5EBL8 140 aa12.3□□□□□ -0.44
DDB1-220ENST00000542337 MRPL18Q9H0U6 180 aaKnown RBP12.3□□□□□ -0.44
DDB1-220ENST00000542337 RPS10P5Q9NQ39 176 aa12.3□□□□□ -0.44
DDB1-220ENST00000542337 RHEBQ15382 184 aa12.29□□□□□ -0.44
DDB1-220ENST00000542337 CST9LQ9H4G1 147 aa12.29□□□□□ -0.44
DDB1-220ENST00000542337 XAGE1AQ9HD64 81 aa12.29□□□□□ -0.44
DDB1-220ENST00000542337 PMVKQ15126 192 aa12.28□□□□□ -0.44
DDB1-220ENST00000542337 COX7B2Q8TF08 81 aa12.28□□□□□ -0.44
DDB1-220ENST00000542337 C22orf24Q9Y442 160 aa12.28□□□□□ -0.44
DDB1-220ENST00000542337 SMIM1B2RUZ4 78 aa12.27□□□□□ -0.45
DDB1-220ENST00000542337 PRR26Q8N8Z3 221 aa12.26□□□□□ -0.45
DDB1-220ENST00000542337 IGLV5-45A0A087WSX0 123 aa12.25□□□□□ -0.45
DDB1-220ENST00000542337 H3BRM9 83 aa12.25□□□□□ -0.45
DDB1-220ENST00000542337 NUPR1O60356 82 aa12.25□□□□□ -0.45
DDB1-220ENST00000542337 C10orf91Q5T1B1 145 aa12.25□□□□□ -0.45
DDB1-220ENST00000542337 IGLV1-50A0A075B6I6 118 aa12.24□□□□□ -0.45
DDB1-220ENST00000542337 CARHSP1Q9Y2V2 147 aaKnown RBP12.24□□□□□ -0.45
DDB1-220ENST00000542337 SPINK8P0C7L1 97 aa12.23□□□□□ -0.45
DDB1-220ENST00000542337 TP73-AS1Q9UF72 201 aa12.23□□□□□ -0.45
DDB1-220ENST00000542337 ZNF861PO60384 105 aa12.22□□□□□ -0.45
DDB1-220ENST00000542337 NDUFA6P56556 154 aa12.22□□□□□ -0.45
DDB1-220ENST00000542337 MRPL55Q7Z7F7 128 aaKnown RBP12.22□□□□□ -0.45
DDB1-220ENST00000542337 TRAPPC1Q9Y5R8 145 aa12.22□□□□□ -0.45
DDB1-220ENST00000542337 ATP5LO75964 103 aa12.2□□□□□ -0.46
DDB1-220ENST00000542337 LINC00614P0C842 121 aa12.2□□□□□ -0.46
DDB1-220ENST00000542337 RAB5BP61020 215 aa12.2□□□□□ -0.46
DDB1-220ENST00000542337 LRP2P98164 4655 aa12.2□□□□□ -0.46
DDB1-220ENST00000542337 RPL13AP40429 203 aaKnown RBP12.19□□□□□ -0.46
DDB1-220ENST00000542337 NDUFA5Q16718 116 aa12.17□□□□□ -0.46
DDB1-220ENST00000542337 HBDP02042 147 aa12.16□□□□□ -0.46
DDB1-220ENST00000542337 KRTAP1-4P0C5Y4 121 aa12.16□□□□□ -0.46
DDB1-220ENST00000542337 IGLC3P0DOY3 106 aa12.16□□□□□ -0.46
DDB1-220ENST00000542337 RPL28P46779 137 aaKnown RBP12.16□□□□□ -0.46
DDB1-220ENST00000542337 NKAPP1Q8N9T2 125 aa12.16□□□□□ -0.46
DDB1-220ENST00000542337 BCE1O60756 84 aa12.15□□□□□ -0.46
DDB1-220ENST00000542337 C18orf32Q8TCD1 76 aa12.15□□□□□ -0.46
DDB1-220ENST00000542337 LINC00167Q96N53 147 aa12.15□□□□□ -0.46
DDB1-220ENST00000542337 SNAPINO95295 136 aa12.14□□□□□ -0.47
DDB1-220ENST00000542337 APOC3P02656 99 aa12.14□□□□□ -0.47
DDB1-220ENST00000542337 RPL37AP8A6NKH3 93 aa12.13□□□□□ -0.47
DDB1-220ENST00000542337 SVBPQ8N300 66 aa12.13□□□□□ -0.47
DDB1-220ENST00000542337 GAGE10A6NGK3 116 aa12.12□□□□□ -0.47
DDB1-220ENST00000542337 PFN2P35080 140 aa12.12□□□□□ -0.47
DDB1-220ENST00000542337 IGLV5-37A0A075B6J1 123 aa12.11□□□□□ -0.47
DDB1-220ENST00000542337 A0A096LNJ9 63 aa12.11□□□□□ -0.47
DDB1-220ENST00000542337 IGLV5-39A0A0G2JS06 123 aa12.11□□□□□ -0.47
DDB1-220ENST00000542337 ZNF22P17026 224 aaPredicted RBP12.11□□□□□ -0.47
DDB1-220ENST00000542337 PMCHL1Q16048 86 aa12.11□□□□□ -0.47
DDB1-220ENST00000542337 BAGE3Q86Y29 109 aa12.11□□□□□ -0.47
DDB1-220ENST00000542337 URB1-AS1Q96HZ7 61 aa12.1□□□□□ -0.47
DDB1-220ENST00000542337 TMEM170BQ5T4T1 132 aa12.09□□□□□ -0.47
DDB1-220ENST00000542337 SFTA2Q6UW10 78 aa12.09□□□□□ -0.47
DDB1-220ENST00000542337 COX17Q14061 63 aa12.08□□□□□ -0.48
DDB1-220ENST00000542337 ERG28Q9UKR5 140 aa12.08□□□□□ -0.48
DDB1-220ENST00000542337 UBE2AP49459 152 aa12.07□□□□□ -0.48
DDB1-220ENST00000542337 RPL24P83731 157 aaKnown RBP12.06□□□□□ -0.48
DDB1-220ENST00000542337 C11orf86A6NJI1 115 aa12.05□□□□□ -0.48
DDB1-220ENST00000542337 CHTOPQ9Y3Y2 248 aaKnown RBP12.05□□□□□ -0.48
DDB1-220ENST00000542337 CRYGAP11844 174 aa12.04□□□□□ -0.48
DDB1-220ENST00000542337 ZNF625Q96I27 306 aaPredicted RBP12.04□□□□□ -0.48
DDB1-220ENST00000542337 SND1-IT1Q9HBX3 110 aa12.04□□□□□ -0.48
DDB1-220ENST00000542337 IGKV2-28A0A075B6P5 120 aa12.03□□□□□ -0.48
DDB1-220ENST00000542337 IGKV2D-28P01615 120 aa12.03□□□□□ -0.48
DDB1-220ENST00000542337 CHCHD1Q96BP2 118 aaKnown RBP12.03□□□□□ -0.48
DDB1-220ENST00000542337 PRR4Q16378 134 aa12.01□□□□□ -0.49
DDB1-220ENST00000542337 TYMSOSQ8TAI1 123 aa12.01□□□□□ -0.49
DDB1-220ENST00000542337 SCO1O75880 301 aa12□□□□□ -0.49
DDB1-220ENST00000542337 VPREB1P12018 145 aa11.99□□□□□ -0.49
DDB1-220ENST00000542337 IFI27L1Q96BM0 104 aa11.99□□□□□ -0.49
DDB1-220ENST00000542337 RNF213Q63HN8 5207 aa11.98□□□□□ -0.49
DDB1-220ENST00000542337 TRAV12-1A0A0B4J245 112 aa11.98□□□□□ -0.49
DDB1-220ENST00000542337 LINC00158P58513 81 aa11.98□□□□□ -0.49
DDB1-220ENST00000542337 A0A087X002 238 aa11.97□□□□□ -0.49
DDB1-220ENST00000542337 ATP6V1G1O75348 118 aa11.97□□□□□ -0.49
DDB1-220ENST00000542337 TSPAN13O95857 204 aa11.97□□□□□ -0.49
DDB1-220ENST00000542337 KRTAP13-1Q8IUC0 172 aa11.97□□□□□ -0.49
DDB1-220ENST00000542337 FAM19A1Q7Z5A9 133 aa11.96□□□□□ -0.49
DDB1-220ENST00000542337 TMEM223A0PJW6 202 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms