RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 ZNF815PA8K554 130 aa6.19□□□□□ -1.42
LDHA-220ENST00000542179 UBE2DNLQ8IWF7 75 aa6.19□□□□□ -1.42
LDHA-220ENST00000542179 TP73-AS1Q9UF72 201 aa6.19□□□□□ -1.42
LDHA-220ENST00000542179 DYNC2H1Q8NCM8 4307 aaKnown RBP6.19□□□□□ -1.42
LDHA-220ENST00000542179 NDUFA1O15239 70 aa6.18□□□□□ -1.42
LDHA-220ENST00000542179 COX7B2Q8TF08 81 aa6.18□□□□□ -1.42
LDHA-220ENST00000542179 KRTAP4-5Q9BYR2 181 aa6.18□□□□□ -1.42
LDHA-220ENST00000542179 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
LDHA-220ENST00000542179 LINC00587B1AMM8 73 aa6.17□□□□□ -1.42
LDHA-220ENST00000542179 APOMO95445 188 aa6.17□□□□□ -1.42
LDHA-220ENST00000542179 MALP21145 153 aa6.17□□□□□ -1.42
LDHA-220ENST00000542179 CTAG1AP78358 180 aa6.17□□□□□ -1.42
LDHA-220ENST00000542179 SFTA2Q6UW10 78 aa6.17□□□□□ -1.42
LDHA-220ENST00000542179 Q8IZM0 81 aa6.17□□□□□ -1.42
LDHA-220ENST00000542179 RMI2Q96E14 147 aa6.17□□□□□ -1.42
LDHA-220ENST00000542179 ZNF625Q96I27 306 aaPredicted RBP6.17□□□□□ -1.42
LDHA-220ENST00000542179 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
LDHA-220ENST00000542179 A0A0J9YXY3 114 aa6.16□□□□□ -1.42
LDHA-220ENST00000542179 HERV-K104P63124 156 aa6.16□□□□□ -1.42
LDHA-220ENST00000542179 KIAA0087Q14695 138 aa6.16□□□□□ -1.42
LDHA-220ENST00000542179 TAL2Q16559 108 aa6.16□□□□□ -1.42
LDHA-220ENST00000542179 SCGB1D4Q6XE38 83 aa6.16□□□□□ -1.42
LDHA-220ENST00000542179 COX11Q9Y6N1 276 aa6.16□□□□□ -1.42
LDHA-220ENST00000542179 IGKV2D-24A0A075B6R9 120 aa6.15□□□□□ -1.42
LDHA-220ENST00000542179 C3orf84H3BNL1 204 aa6.15□□□□□ -1.42
LDHA-220ENST00000542179 TIMM17BO60830 172 aa6.15□□□□□ -1.42
LDHA-220ENST00000542179 HSD52Q0P140 79 aa6.15□□□□□ -1.42
LDHA-220ENST00000542179 TTC32Q5I0X7 151 aa6.15□□□□□ -1.42
LDHA-220ENST00000542179 SPANXB1Q9NS25 103 aaPredicted RBP6.15□□□□□ -1.42
LDHA-220ENST00000542179 PRSS2P07478 247 aa6.14□□□□□ -1.43
LDHA-220ENST00000542179 CXCL5P42830 114 aa6.14□□□□□ -1.43
LDHA-220ENST00000542179 C6orf226Q5I0X4 101 aa6.14□□□□□ -1.43
LDHA-220ENST00000542179 CASC10Q5T4H9 136 aa6.14□□□□□ -1.43
LDHA-220ENST00000542179 ORAOV1Q8WV07 137 aa6.14□□□□□ -1.43
LDHA-220ENST00000542179 KRTAP1-5Q9BYS1 174 aa6.14□□□□□ -1.43
LDHA-220ENST00000542179 TOMM7Q9P0U1 55 aa6.14□□□□□ -1.43
LDHA-220ENST00000542179 NBDYA0A0U1RRE5 68 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 TMEM238C9JI98 176 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 F8WDY8 70 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 M0R143 59 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 CIRBPQ14011 172 aaKnown RBP6.13□□□□□ -1.43
LDHA-220ENST00000542179 CFAP161Q6P656 301 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 Q6ZVH6 145 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 LITAFQ99732 161 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 TM2D2Q9BX73 214 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 Q9HAA7 133 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 DNAH7Q8WXX0 4024 aa6.13□□□□□ -1.43
LDHA-220ENST00000542179 CKS1BP61024 79 aa6.12□□□□□ -1.43
LDHA-220ENST00000542179 SPAG11BQ08648 103 aa6.12□□□□□ -1.43
LDHA-220ENST00000542179 BVES-AS1Q5T3Y7 98 aa6.12□□□□□ -1.43
LDHA-220ENST00000542179 CSMD3Q7Z407 3707 aa6.12□□□□□ -1.43
LDHA-220ENST00000542179 NTN5Q8WTR8 489 aaPredicted RBP6.12□□□□□ -1.43
LDHA-220ENST00000542179 SNHG12Q9BXW3 62 aa6.12□□□□□ -1.43
LDHA-220ENST00000542179 RYR2Q92736 4967 aa6.11□□□□□ -1.43
LDHA-220ENST00000542179 GVQW2A0A096LPI5 108 aaPredicted RBP6.11□□□□□ -1.43
LDHA-220ENST00000542179 SRSF9Q13242 221 aaKnown RBP eCLIP6.11□□□□□ -1.43
LDHA-220ENST00000542179 CEND1Q8N111 149 aa6.11□□□□□ -1.43
LDHA-220ENST00000542179 C15orf56Q8N910 161 aa6.11□□□□□ -1.43
LDHA-220ENST00000542179 C2orf48Q96LS8 159 aa6.11□□□□□ -1.43
LDHA-220ENST00000542179 HIST1H4GQ99525 98 aa6.11□□□□□ -1.43
LDHA-220ENST00000542179 SPANXDQ9BXN6 97 aa6.11□□□□□ -1.43
LDHA-220ENST00000542179 PPDPFQ9H3Y8 114 aa6.11□□□□□ -1.43
LDHA-220ENST00000542179 SPANXCQ9NY87 97 aa6.11□□□□□ -1.43
LDHA-220ENST00000542179 HINT1P49773 126 aaPredicted RBP6.1□□□□□ -1.43
LDHA-220ENST00000542179 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
LDHA-220ENST00000542179 COX17Q14061 63 aa6.1□□□□□ -1.43
LDHA-220ENST00000542179 LBHQ53QV2 105 aaPredicted RBP6.1□□□□□ -1.43
LDHA-220ENST00000542179 ADAMTSL4-AS1Q5T5F5 129 aa6.1□□□□□ -1.43
LDHA-220ENST00000542179 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
LDHA-220ENST00000542179 ZNF561-AS1K7EIQ3 104 aa6.09□□□□□ -1.43
LDHA-220ENST00000542179 IFITM1P13164 125 aa6.09□□□□□ -1.43
LDHA-220ENST00000542179 KRTAP10-2P60368 255 aa6.09□□□□□ -1.43
LDHA-220ENST00000542179 MEIG1Q5JSS6 88 aa6.09□□□□□ -1.43
LDHA-220ENST00000542179 C2orf82Q6UX34 121 aa6.09□□□□□ -1.43
LDHA-220ENST00000542179 Q6ZR54 194 aa6.09□□□□□ -1.43
LDHA-220ENST00000542179 ERG28Q9UKR5 140 aa6.09□□□□□ -1.43
LDHA-220ENST00000542179 STARD9Q9P2P6 4700 aa6.09□□□□□ -1.43
LDHA-220ENST00000542179 HERC2O95714 4834 aa6.08□□□□□ -1.44
LDHA-220ENST00000542179 SMIM13P0DJ93 91 aa6.08□□□□□ -1.44
LDHA-220ENST00000542179 GCSHP23434 173 aa6.08□□□□□ -1.44
LDHA-220ENST00000542179 C6orf223Q8N319 242 aa6.08□□□□□ -1.44
LDHA-220ENST00000542179 COPS9Q8WXC6 57 aa6.08□□□□□ -1.44
LDHA-220ENST00000542179 LINC00476Q8WZB0 136 aa6.08□□□□□ -1.44
LDHA-220ENST00000542179 PLECQ15149 4684 aaKnown RBP6.08□□□□□ -1.44
LDHA-220ENST00000542179 TRBV30A0A0K0K1B3 111 aa6.07□□□□□ -1.44
LDHA-220ENST00000542179 USP17L23D6RBM5 183 aa6.07□□□□□ -1.44
LDHA-220ENST00000542179 FXYD2P54710 66 aa6.07□□□□□ -1.44
LDHA-220ENST00000542179 RPL24P83731 157 aaKnown RBP6.07□□□□□ -1.44
LDHA-220ENST00000542179 HIGD2BQ4VC39 106 aa6.07□□□□□ -1.44
LDHA-220ENST00000542179 C10orf25Q5T742 122 aa6.07□□□□□ -1.44
LDHA-220ENST00000542179 UNQ6190/PRO20217Q6UXQ8 127 aa6.07□□□□□ -1.44
LDHA-220ENST00000542179 Q6ZRN7 208 aaPredicted RBP6.07□□□□□ -1.44
LDHA-220ENST00000542179 MUSTN1Q8IVN3 82 aa6.07□□□□□ -1.44
LDHA-220ENST00000542179 DNAH1Q9P2D7 4330 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 A0A1B0GWB2 263 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 A6NDN8 102 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 PSCAO43653 123 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 LY6G6CO95867 125 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 LINC00158P58513 81 aa6.06□□□□□ -1.44
LDHA-220ENST00000542179 BATFQ16520 125 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms