RNA–Protein interactions for RNA: ENST00000542165.1

CWC15-203, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 1 (best)

Gene CWC15, Length 921 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-203ENST00000542165 C2orf82Q6UX34 121 aa12.98□□□□□ -0.33
CWC15-203ENST00000542165 CBLN2Q8IUK8 224 aa12.98□□□□□ -0.33
CWC15-203ENST00000542165 URB1-AS1Q96HZ7 61 aa12.98□□□□□ -0.33
CWC15-203ENST00000542165 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
CWC15-203ENST00000542165 NDUFC2-KCTD14E9PQ53 114 aa12.97□□□□□ -0.33
CWC15-203ENST00000542165 H3BRM9 83 aa12.97□□□□□ -0.33
CWC15-203ENST00000542165 ATP5LO75964 103 aa12.97□□□□□ -0.33
CWC15-203ENST00000542165 PDZD11Q5EBL8 140 aa12.97□□□□□ -0.33
CWC15-203ENST00000542165 Q6ZRP5 223 aa12.97□□□□□ -0.33
CWC15-203ENST00000542165 SLC7A5P1Q8MH63 180 aa12.97□□□□□ -0.33
CWC15-203ENST00000542165 A0A096LNJ9 63 aa12.96□□□□□ -0.33
CWC15-203ENST00000542165 A0A1W2PNN7 141 aa12.96□□□□□ -0.33
CWC15-203ENST00000542165 NDUFA6P56556 154 aa12.96□□□□□ -0.33
CWC15-203ENST00000542165 PRR3P79522 188 aaKnown RBP12.96□□□□□ -0.33
CWC15-203ENST00000542165 GAGE2EQ4V326 116 aa12.95□□□□□ -0.34
CWC15-203ENST00000542165 CHCHD1Q96BP2 118 aaKnown RBP12.95□□□□□ -0.34
CWC15-203ENST00000542165 GAGE2DQ9UEU5 116 aa12.95□□□□□ -0.34
CWC15-203ENST00000542165 PKHD1L1Q86WI1 4243 aa12.94□□□□□ -0.34
CWC15-203ENST00000542165 SMIM1B2RUZ4 78 aa12.94□□□□□ -0.34
CWC15-203ENST00000542165 F8VRH5 84 aa12.94□□□□□ -0.34
CWC15-203ENST00000542165 HNRNPA3P51991 378 aaKnown RBP12.94□□□□□ -0.34
CWC15-203ENST00000542165 PMCHL1Q16048 86 aa12.93□□□□□ -0.34
CWC15-203ENST00000542165 IGLC3P0DOY3 106 aa12.92□□□□□ -0.34
CWC15-203ENST00000542165 COX7B2Q8TF08 81 aa12.92□□□□□ -0.34
CWC15-203ENST00000542165 SPINK8P0C7L1 97 aa12.9□□□□□ -0.34
CWC15-203ENST00000542165 BAGE3Q86Y29 109 aa12.9□□□□□ -0.34
CWC15-203ENST00000542165 FAM19A5Q7Z5A7 132 aaPredicted RBP12.88□□□□□ -0.35
CWC15-203ENST00000542165 HSBP1O75506 76 aa12.87□□□□□ -0.35
CWC15-203ENST00000542165 TRGC2P03986 189 aa12.87□□□□□ -0.35
CWC15-203ENST00000542165 PHF5AQ7RTV0 110 aaKnown RBP12.87□□□□□ -0.35
CWC15-203ENST00000542165 HERC1Q15751 4861 aa12.87□□□□□ -0.35
CWC15-203ENST00000542165 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
CWC15-203ENST00000542165 FAM168BA1KXE4 195 aa12.85□□□□□ -0.35
CWC15-203ENST00000542165 ZNF22P17026 224 aaPredicted RBP12.85□□□□□ -0.35
CWC15-203ENST00000542165 SPINK6Q6UWN8 80 aa12.85□□□□□ -0.35
CWC15-203ENST00000542165 LRP1Q07954 4544 aaKnown RBP12.85□□□□□ -0.35
CWC15-203ENST00000542165 M0QXV9 152 aa12.84□□□□□ -0.35
CWC15-203ENST00000542165 IFI27L1Q96BM0 104 aa12.84□□□□□ -0.35
CWC15-203ENST00000542165 TRAV12-1A0A0B4J245 112 aa12.83□□□□□ -0.36
CWC15-203ENST00000542165 C9orf129Q5T035 196 aaKnown RBP12.83□□□□□ -0.36
CWC15-203ENST00000542165 PSORS1C2Q9UIG4 136 aa12.83□□□□□ -0.36
CWC15-203ENST00000542165 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
CWC15-203ENST00000542165 IGLV5-39A0A0G2JS06 123 aa12.82□□□□□ -0.36
CWC15-203ENST00000542165 TMEM170BQ5T4T1 132 aa12.82□□□□□ -0.36
CWC15-203ENST00000542165 UBE2BP63146 152 aa12.81□□□□□ -0.36
CWC15-203ENST00000542165 SFTA2Q6UW10 78 aa12.81□□□□□ -0.36
CWC15-203ENST00000542165 C11orf86A6NJI1 115 aa12.8□□□□□ -0.36
CWC15-203ENST00000542165 COLCA2A8K830 154 aa12.8□□□□□ -0.36
CWC15-203ENST00000542165 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
CWC15-203ENST00000542165 REG3GQ6UW15 175 aa12.8□□□□□ -0.36
CWC15-203ENST00000542165 ODF1Q14990 250 aa12.79□□□□□ -0.36
CWC15-203ENST00000542165 XAGE1AQ9HD64 81 aa12.79□□□□□ -0.36
CWC15-203ENST00000542165 FAM19A2Q8N3H0 131 aa12.78□□□□□ -0.36
CWC15-203ENST00000542165 SRSF9Q13242 221 aaKnown RBP eCLIP12.77□□□□□ -0.37
CWC15-203ENST00000542165 LBHQ53QV2 105 aaPredicted RBP12.77□□□□□ -0.37
CWC15-203ENST00000542165 SERF1AO75920 110 aa12.76□□□□□ -0.37
CWC15-203ENST00000542165 LEPROTL1O95214 131 aa12.76□□□□□ -0.37
CWC15-203ENST00000542165 KRTAP7-1Q8IUC3 87 aa12.76□□□□□ -0.37
CWC15-203ENST00000542165 SERTAD4-AS1Q5TG53 156 aa12.74□□□□□ -0.37
CWC15-203ENST00000542165 TP73-AS1Q9UF72 201 aa12.74□□□□□ -0.37
CWC15-203ENST00000542165 HSPB8Q9UJY1 196 aa12.74□□□□□ -0.37
CWC15-203ENST00000542165 C22orf24Q9Y442 160 aa12.74□□□□□ -0.37
CWC15-203ENST00000542165 COX17Q14061 63 aa12.73□□□□□ -0.37
CWC15-203ENST00000542165 IGLV7-43P04211 117 aa12.72□□□□□ -0.37
CWC15-203ENST00000542165 LINC01600Q96MT4 127 aa12.72□□□□□ -0.37
CWC15-203ENST00000542165 PLA2G2DQ9UNK4 145 aa12.72□□□□□ -0.37
CWC15-203ENST00000542165 TMEM223A0PJW6 202 aa12.71□□□□□ -0.37
CWC15-203ENST00000542165 PFN2P35080 140 aa12.71□□□□□ -0.37
CWC15-203ENST00000542165 ERG28Q9UKR5 140 aa12.71□□□□□ -0.37
CWC15-203ENST00000542165 H0Y8G0 127 aa12.7□□□□□ -0.38
CWC15-203ENST00000542165 LINC00310P59036 64 aa12.7□□□□□ -0.38
CWC15-203ENST00000542165 MRPL55Q7Z7F7 128 aaKnown RBP12.7□□□□□ -0.38
CWC15-203ENST00000542165 DIRC1Q969H9 104 aa12.7□□□□□ -0.38
CWC15-203ENST00000542165 NUPR1O60356 82 aa12.69□□□□□ -0.38
CWC15-203ENST00000542165 MT1HL1P0DM35 61 aa12.69□□□□□ -0.38
CWC15-203ENST00000542165 KRTAP11-1Q8IUC1 163 aa12.68□□□□□ -0.38
CWC15-203ENST00000542165 NKAPP1Q8N9T2 125 aa12.68□□□□□ -0.38
CWC15-203ENST00000542165 SCO1O75880 301 aa12.67□□□□□ -0.38
CWC15-203ENST00000542165 PLNP26678 52 aa12.67□□□□□ -0.38
CWC15-203ENST00000542165 ZNF625Q96I27 306 aaPredicted RBP12.67□□□□□ -0.38
CWC15-203ENST00000542165 IGLV5-37A0A075B6J1 123 aa12.66□□□□□ -0.38
CWC15-203ENST00000542165 FABP4P15090 132 aa12.66□□□□□ -0.38
CWC15-203ENST00000542165 RPL24P83731 157 aaKnown RBP12.64□□□□□ -0.39
CWC15-203ENST00000542165 H0Y9J4 135 aa12.63□□□□□ -0.39
CWC15-203ENST00000542165 HERV-K104P63124 156 aa12.63□□□□□ -0.39
CWC15-203ENST00000542165 MAP1LC3CQ9BXW4 147 aa12.63□□□□□ -0.39
CWC15-203ENST00000542165 SND1-IT1Q9HBX3 110 aa12.63□□□□□ -0.39
CWC15-203ENST00000542165 LINC00587B1AMM8 73 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 HIST1H2BKO60814 126 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 DPM2O94777 84 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 HIST1H2BJP06899 126 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 HIST1H2BOP23527 126 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 HIST1H2BBP33778 126 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 LINC00158P58513 81 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 HIST1H2BDP58876 126 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 HERVK_113P61574 105 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 HIST1H2BCP62807 126 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 HIST2H2BEQ16778 126 aa12.62□□□□□ -0.39
CWC15-203ENST00000542165 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.62□□□□□ -0.39
CWC15-203ENST00000542165 HIST1H2BHQ93079 126 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms