RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 SPAG11BQ08648 103 aa11.79□□□□□ -0.52
RAB6A-208ENST00000541795 ADAMTSL4-AS1Q5T5F5 129 aa11.79□□□□□ -0.52
RAB6A-208ENST00000541795 SPANXDQ9BXN6 97 aa11.79□□□□□ -0.52
RAB6A-208ENST00000541795 SPANXCQ9NY87 97 aa11.79□□□□□ -0.52
RAB6A-208ENST00000541795 CXCL5P42830 114 aa11.79□□□□□ -0.52
RAB6A-208ENST00000541795 CKS1BP61024 79 aa11.79□□□□□ -0.52
RAB6A-208ENST00000541795 A6NDN8 102 aa11.78□□□□□ -0.52
RAB6A-208ENST00000541795 C2orf82Q6UX34 121 aa11.78□□□□□ -0.52
RAB6A-208ENST00000541795 RMI2Q96E14 147 aa11.78□□□□□ -0.52
RAB6A-208ENST00000541795 A0A0U1RRA0 63 aa11.76□□□□□ -0.53
RAB6A-208ENST00000541795 Q6ZVH6 145 aa11.76□□□□□ -0.53
RAB6A-208ENST00000541795 DNAH1Q9P2D7 4330 aa11.76□□□□□ -0.53
RAB6A-208ENST00000541795 SMIM13P0DJ93 91 aa11.76□□□□□ -0.53
RAB6A-208ENST00000541795 DAND5Q8N907 189 aa11.76□□□□□ -0.53
RAB6A-208ENST00000541795 WWC2-AS2Q96NR7 200 aa11.76□□□□□ -0.53
RAB6A-208ENST00000541795 KRTAP1-5Q9BYS1 174 aa11.76□□□□□ -0.53
RAB6A-208ENST00000541795 TENM2Q9NT68 2774 aa11.75□□□□□ -0.53
RAB6A-208ENST00000541795 TMEM238LA0A1B0GVL6 79 aa11.74□□□□□ -0.53
RAB6A-208ENST00000541795 A6NJY4 79 aa11.74□□□□□ -0.53
RAB6A-208ENST00000541795 MUSTN1Q8IVN3 82 aa11.74□□□□□ -0.53
RAB6A-208ENST00000541795 NHP2Q9NX24 153 aaKnown RBP11.74□□□□□ -0.53
RAB6A-208ENST00000541795 C6orf223Q8N319 242 aa11.74□□□□□ -0.53
RAB6A-208ENST00000541795 C15orf56Q8N910 161 aa11.74□□□□□ -0.53
RAB6A-208ENST00000541795 LINC00526Q96FQ7 95 aa11.74□□□□□ -0.53
RAB6A-208ENST00000541795 TGP01266 2768 aa11.74□□□□□ -0.53
RAB6A-208ENST00000541795 NPC2P61916 151 aa11.73□□□□□ -0.53
RAB6A-208ENST00000541795 HIGD2BQ4VC39 106 aa11.73□□□□□ -0.53
RAB6A-208ENST00000541795 ERG28Q9UKR5 140 aa11.73□□□□□ -0.53
RAB6A-208ENST00000541795 RPL24P83731 157 aaKnown RBP11.72□□□□□ -0.53
RAB6A-208ENST00000541795 ZNF561-AS1K7EIQ3 104 aa11.72□□□□□ -0.53
RAB6A-208ENST00000541795 IFITM1P13164 125 aa11.72□□□□□ -0.53
RAB6A-208ENST00000541795 LINC00158P58513 81 aa11.72□□□□□ -0.53
RAB6A-208ENST00000541795 K7ERJ3 54 aa11.71□□□□□ -0.54
RAB6A-208ENST00000541795 PFN2P35080 140 aa11.71□□□□□ -0.54
RAB6A-208ENST00000541795 TTC32Q5I0X7 151 aa11.71□□□□□ -0.54
RAB6A-208ENST00000541795 NTN5Q8WTR8 489 aaPredicted RBP11.71□□□□□ -0.54
RAB6A-208ENST00000541795 COX11Q9Y6N1 276 aa11.71□□□□□ -0.54
RAB6A-208ENST00000541795 UNQ6190/PRO20217Q6UXQ8 127 aa11.7□□□□□ -0.54
RAB6A-208ENST00000541795 MIR7-3HGQ8N6C7 128 aa11.7□□□□□ -0.54
RAB6A-208ENST00000541795 NBDYA0A0U1RRE5 68 aa11.7□□□□□ -0.54
RAB6A-208ENST00000541795 A4D1N5 150 aa11.7□□□□□ -0.54
RAB6A-208ENST00000541795 TAX1BP3O14907 124 aa11.7□□□□□ -0.54
RAB6A-208ENST00000541795 CASC10Q5T4H9 136 aa11.7□□□□□ -0.54
RAB6A-208ENST00000541795 C10orf25Q5T742 122 aa11.7□□□□□ -0.54
RAB6A-208ENST00000541795 LINC00308Q8TCZ7 52 aa11.7□□□□□ -0.54
RAB6A-208ENST00000541795 GVQW2A0A096LPI5 108 aaPredicted RBP11.69□□□□□ -0.54
RAB6A-208ENST00000541795 A0A1B0GWB2 263 aa11.69□□□□□ -0.54
RAB6A-208ENST00000541795 COPS9Q8WXC6 57 aa11.69□□□□□ -0.54
RAB6A-208ENST00000541795 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
RAB6A-208ENST00000541795 RAB37Q96AX2 223 aa11.68□□□□□ -0.54
RAB6A-208ENST00000541795 VPS13DQ5THJ4 4388 aa11.67□□□□□ -0.54
RAB6A-208ENST00000541795 COX17Q14061 63 aa11.67□□□□□ -0.54
RAB6A-208ENST00000541795 C9orf116Q5BN46 136 aaPredicted RBP11.67□□□□□ -0.54
RAB6A-208ENST00000541795 SOSTDC1Q6X4U4 206 aa11.67□□□□□ -0.54
RAB6A-208ENST00000541795 C2orf48Q96LS8 159 aa11.67□□□□□ -0.54
RAB6A-208ENST00000541795 CAMK2N2Q96S95 79 aa11.67□□□□□ -0.54
RAB6A-208ENST00000541795 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
RAB6A-208ENST00000541795 CFC1BP0CG36 223 aa11.66□□□□□ -0.54
RAB6A-208ENST00000541795 CFC1P0CG37 223 aa11.66□□□□□ -0.54
RAB6A-208ENST00000541795 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.65□□□□□ -0.54
RAB6A-208ENST00000541795 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.55
RAB6A-208ENST00000541795 C6orf48Q9UBA6 75 aa11.65□□□□□ -0.55
RAB6A-208ENST00000541795 F8WDY8 70 aa11.64□□□□□ -0.55
RAB6A-208ENST00000541795 TRBV30A0A0K0K1B3 111 aa11.63□□□□□ -0.55
RAB6A-208ENST00000541795 PSCAO43653 123 aa11.63□□□□□ -0.55
RAB6A-208ENST00000541795 Q6ZRU5 148 aa11.63□□□□□ -0.55
RAB6A-208ENST00000541795 A0A0B4J2C4 111 aa11.63□□□□□ -0.55
RAB6A-208ENST00000541795 C9orf118A6NHY6 69 aa11.62□□□□□ -0.55
RAB6A-208ENST00000541795 LECT2O14960 151 aa11.62□□□□□ -0.55
RAB6A-208ENST00000541795 C3orf84H3BNL1 204 aa11.6□□□□□ -0.55
RAB6A-208ENST00000541795 M0R2N4 97 aa11.6□□□□□ -0.55
RAB6A-208ENST00000541795 SYCNQ0VAF6 134 aa11.6□□□□□ -0.55
RAB6A-208ENST00000541795 NAA38Q9BRA0 125 aaKnown RBP11.6□□□□□ -0.55
RAB6A-208ENST00000541795 PRO1854Q9UHT4 67 aa11.6□□□□□ -0.55
RAB6A-208ENST00000541795 DNAH10Q8IVF4 4471 aa11.6□□□□□ -0.55
RAB6A-208ENST00000541795 H3BUT2 72 aa11.59□□□□□ -0.55
RAB6A-208ENST00000541795 SND1-IT1Q9HBX3 110 aa11.59□□□□□ -0.55
RAB6A-208ENST00000541795 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
RAB6A-208ENST00000541795 LY6G6CO95867 125 aa11.58□□□□□ -0.56
RAB6A-208ENST00000541795 WFDC2Q14508 124 aa11.58□□□□□ -0.56
RAB6A-208ENST00000541795 CARD19Q96LW7 228 aa11.58□□□□□ -0.56
RAB6A-208ENST00000541795 LOC107984156A0A0G2JMH3 177 aa11.56□□□□□ -0.56
RAB6A-208ENST00000541795 TSPAN13O95857 204 aa11.56□□□□□ -0.56
RAB6A-208ENST00000541795 ARL17AQ8IVW1 177 aa11.56□□□□□ -0.56
RAB6A-208ENST00000541795 LINC00476Q8WZB0 136 aa11.56□□□□□ -0.56
RAB6A-208ENST00000541795 SLPIP03973 132 aa11.56□□□□□ -0.56
RAB6A-208ENST00000541795 Q6ZRN7 208 aaPredicted RBP11.56□□□□□ -0.56
RAB6A-208ENST00000541795 Q6ZR54 194 aa11.55□□□□□ -0.56
RAB6A-208ENST00000541795 A0A1W2PPM0 123 aa11.53□□□□□ -0.56
RAB6A-208ENST00000541795 NDUFC2-KCTD14E9PQ53 114 aa11.53□□□□□ -0.56
RAB6A-208ENST00000541795 H7C2G1 150 aa11.53□□□□□ -0.56
RAB6A-208ENST00000541795 KMT2AQ03164 3969 aa11.53□□□□□ -0.56
RAB6A-208ENST00000541795 RPL13AP40429 203 aaKnown RBP11.53□□□□□ -0.56
RAB6A-208ENST00000541795 RNF151Q2KHN1 245 aa11.53□□□□□ -0.56
RAB6A-208ENST00000541795 C14orf177Q52M58 125 aa11.53□□□□□ -0.56
RAB6A-208ENST00000541795 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.57
RAB6A-208ENST00000541795 IGKV2D-28P01615 120 aa11.52□□□□□ -0.57
RAB6A-208ENST00000541795 VAMP3Q15836 100 aa11.52□□□□□ -0.57
RAB6A-208ENST00000541795 Q1RN00 199 aa11.51□□□□□ -0.57
RAB6A-208ENST00000541795 ALMS1Q8TCU4 4167 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms