RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 C4BP0C0L5 1744 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 TRRAPQ9Y4A5 3859 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 USH2AO75445 5202 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 KMT2AQ03164 3969 aa0.29□□□□□ -2.36
CUL3-214ENST00000541548 DNAH1Q9P2D7 4330 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 MYCBP2O75592 4640 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 PKDREJQ9NTG1 2253 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 RGPD8O14715 1765 aaPredicted RBP0.28□□□□□ -2.36
CUL3-214ENST00000541548 BCORQ6W2J9 1755 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 RGPD5Q99666 1765 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 PIN1P1O15428 100 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 COX4I1P13073 169 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 EMX2Q04743 252 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 SPCS2Q15005 226 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 RPL7L1Q6DKI1 246 aaKnown RBP0.28□□□□□ -2.36
CUL3-214ENST00000541548 PSMG3Q9BT73 122 aaPredicted RBP0.28□□□□□ -2.36
CUL3-214ENST00000541548 PROK2Q9HC23 129 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 KNL1Q8NG31 2342 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 PLXNA2O75051 1894 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 PKHD1P08F94 4074 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 LRP2P98164 4655 aa0.28□□□□□ -2.36
CUL3-214ENST00000541548 CPSF1Q10570 1443 aaKnown RBP0.28□□□□□ -2.37
CUL3-214ENST00000541548 CEP162Q5TB80 1403 aa0.28□□□□□ -2.37
CUL3-214ENST00000541548 DUOX1Q9NRD9 1551 aa0.28□□□□□ -2.37
CUL3-214ENST00000541548 CADP27708 2225 aa0.28□□□□□ -2.37
CUL3-214ENST00000541548 PLCE1Q9P212 2302 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 SCN7AQ01118 1682 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 LY75O60449 1722 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 DDX60Q8IY21 1712 aaKnown RBP0.27□□□□□ -2.37
CUL3-214ENST00000541548 CRYBG1Q9Y4K1 1723 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 MUC22E2RYF6 1773 aaPredicted RBP0.27□□□□□ -2.37
CUL3-214ENST00000541548 UBR3Q6ZT12 1888 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 RBAKDNA6NC62 111 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 PIRTP0C851 137 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 VMO1Q7Z5L0 202 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 WNK2Q9Y3S1 2297 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 EDC4Q6P2E9 1401 aaKnown RBP0.27□□□□□ -2.37
CUL3-214ENST00000541548 ANKRD50Q9ULJ7 1429 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 SRRM2Q9UQ35 2752 aaKnown RBP0.27□□□□□ -2.37
CUL3-214ENST00000541548 CDC42BPAQ5VT25 1732 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 ARAP2Q8WZ64 1704 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 AKAP12Q02952 1782 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 TSC2P49815 1807 aa0.27□□□□□ -2.37
CUL3-214ENST00000541548 FAT1Q14517 4588 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 PLECQ15149 4684 aaKnown RBP0.26□□□□□ -2.37
CUL3-214ENST00000541548 A0A087WTM6 91 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 TRBV7-1A0A0A6YYK4 115 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 LOC105371267A0A1B0GV96 52 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 CCDC179H3BU77 68 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 CCL3L1P16619 93 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 S100A7L2Q5SY68 101 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 VSTM2AQ8TAG5 236 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 COX7B2Q8TF08 81 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 TPT1P8Q9HAU6 139 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 COPZ2Q9P299 210 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 HECTD4Q9Y4D8 3996 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 CMYA5Q8N3K9 4069 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 DAPK1P53355 1430 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 LRP1BQ9NZR2 4599 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 IQGAP3Q86VI3 1631 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 HSPG2P98160 4391 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 MUC12Q9UKN1 5478 aa0.26□□□□□ -2.37
CUL3-214ENST00000541548 DOCK11Q5JSL3 2073 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 CEP152O94986 1710 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 A6NIN4 97 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 IL5P05113 134 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 ACYP2P14621 99 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 COX6B1P14854 86 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 SSBP1Q04837 148 aaKnown RBP0.25□□□□□ -2.37
CUL3-214ENST00000541548 SMIM21Q3B7S5 101 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 KRTAP19-6Q3LI70 58 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 FAM74A4Q5TZK3 123 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 SPANXN1Q5VSR9 72 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 SLC48A1Q6P1K1 146 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 SPTSSBQ8NFR3 76 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 C10orf82Q8WW14 230 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 ANP32BQ92688 251 aaKnown RBP0.25□□□□□ -2.37
CUL3-214ENST00000541548 BPESC1Q9GZL8 116 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 SAR1AQ9NR31 198 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 V9GYV3 84 aa0.25□□□□□ -2.37
CUL3-214ENST00000541548 LRP1Q07954 4544 aaKnown RBP0.25□□□□□ -2.37
CUL3-214ENST00000541548 CSMD3Q7Z407 3707 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 STARD9Q9P2P6 4700 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 GOLGA4Q13439 2230 aaKnown RBP0.24□□□□□ -2.37
CUL3-214ENST00000541548 RRAS2P62070 204 aaPredicted RBP0.24□□□□□ -2.37
CUL3-214ENST00000541548 UBE2G1P62253 170 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 ALX1Q15699 326 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 Q6ZUT4 128 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 NDUFA11Q86Y39 141 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 RPRMQ9NS64 109 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 TMEM242Q9NWH2 141 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 ANK3Q12955 4377 aaKnown RBP0.24□□□□□ -2.37
CUL3-214ENST00000541548 MYH6P13533 1939 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 DNAH7Q8WXX0 4024 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 WNK3Q9BYP7 1800 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 DYNC1H1Q14204 4646 aaKnown RBP0.24□□□□□ -2.37
CUL3-214ENST00000541548 DNAH9Q9NYC9 4486 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 PKHD1L1Q86WI1 4243 aa0.24□□□□□ -2.37
CUL3-214ENST00000541548 NFAT5O94916 1531 aa0.23□□□□□ -2.37
CUL3-214ENST00000541548 CD163L1Q9NR16 1453 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms