RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CCL18P55774 89 aa9.52□□□□□ -0.88
BNIP3-202ENST00000540159 FAM222AQ5U5X8 452 aa9.52□□□□□ -0.88
BNIP3-202ENST00000540159 A0A087WYN8 130 aa9.52□□□□□ -0.89
BNIP3-202ENST00000540159 B5MCH6 92 aa9.52□□□□□ -0.89
BNIP3-202ENST00000540159 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
BNIP3-202ENST00000540159 C9orf116Q5BN46 136 aaPredicted RBP9.51□□□□□ -0.89
BNIP3-202ENST00000540159 FBN1P35555 2871 aaKnown RBP9.51□□□□□ -0.89
BNIP3-202ENST00000540159 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
BNIP3-202ENST00000540159 HILS1P60008 231 aa9.51□□□□□ -0.89
BNIP3-202ENST00000540159 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
BNIP3-202ENST00000540159 SMIM11BQ8TCY0 68 aa9.51□□□□□ -0.89
BNIP3-202ENST00000540159 SS18L2Q9UHA2 77 aa9.5□□□□□ -0.89
BNIP3-202ENST00000540159 HERV-K104P63124 156 aa9.5□□□□□ -0.89
BNIP3-202ENST00000540159 LINC00269Q8N2A0 174 aa9.5□□□□□ -0.89
BNIP3-202ENST00000540159 OVOL2Q9BRP0 275 aa9.5□□□□□ -0.89
BNIP3-202ENST00000540159 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
BNIP3-202ENST00000540159 GAGE2AQ6NT46 116 aa9.5□□□□□ -0.89
BNIP3-202ENST00000540159 INAFM1C9JVW0 142 aa9.49□□□□□ -0.89
BNIP3-202ENST00000540159 NDUFV3P56181 108 aaKnown RBP9.49□□□□□ -0.89
BNIP3-202ENST00000540159 CCDC179H3BU77 68 aa9.49□□□□□ -0.89
BNIP3-202ENST00000540159 MAST4O15021 2626 aa9.49□□□□□ -0.89
BNIP3-202ENST00000540159 C16orf95Q9H693 158 aa9.48□□□□□ -0.89
BNIP3-202ENST00000540159 F8P00451 2351 aa9.48□□□□□ -0.89
BNIP3-202ENST00000540159 ANGP03950 147 aaKnown RBP9.47□□□□□ -0.89
BNIP3-202ENST00000540159 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
BNIP3-202ENST00000540159 X6R8D5 127 aa9.47□□□□□ -0.89
BNIP3-202ENST00000540159 M0QXV9 152 aa9.47□□□□□ -0.89
BNIP3-202ENST00000540159 LECT2O14960 151 aa9.47□□□□□ -0.89
BNIP3-202ENST00000540159 LY6G6DO95868 133 aa9.47□□□□□ -0.89
BNIP3-202ENST00000540159 DNAL4O96015 105 aa9.47□□□□□ -0.89
BNIP3-202ENST00000540159 FAM19A3Q7Z5A8 133 aa9.47□□□□□ -0.89
BNIP3-202ENST00000540159 C14orf132Q9NPU4 83 aa9.46□□□□□ -0.89
BNIP3-202ENST00000540159 A0A087WZ39 114 aa9.46□□□□□ -0.9
BNIP3-202ENST00000540159 J3QKU1 62 aa9.46□□□□□ -0.9
BNIP3-202ENST00000540159 TENM3Q9P273 2699 aa9.46□□□□□ -0.9
BNIP3-202ENST00000540159 COPS9Q8WXC6 57 aa9.45□□□□□ -0.9
BNIP3-202ENST00000540159 CELA1Q9UNI1 258 aa9.45□□□□□ -0.9
BNIP3-202ENST00000540159 TRAV13-2A0A0B4J235 113 aa9.45□□□□□ -0.9
BNIP3-202ENST00000540159 CMC4P56277 68 aaPredicted RBP9.45□□□□□ -0.9
BNIP3-202ENST00000540159 C22orf24Q9Y442 160 aa9.45□□□□□ -0.9
BNIP3-202ENST00000540159 NCR3O14931 201 aa9.44□□□□□ -0.9
BNIP3-202ENST00000540159 SS18Q15532 418 aa9.44□□□□□ -0.9
BNIP3-202ENST00000540159 PRO0255Q9UI72 69 aa9.44□□□□□ -0.9
BNIP3-202ENST00000540159 KMT2BQ9UMN6 2715 aaPredicted RBP9.43□□□□□ -0.9
BNIP3-202ENST00000540159 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
BNIP3-202ENST00000540159 MALP21145 153 aa9.42□□□□□ -0.9
BNIP3-202ENST00000540159 IGHV4-28A0A0C4DH34 117 aa9.42□□□□□ -0.9
BNIP3-202ENST00000540159 FAM236AA0A1B0GUQ0 79 aa9.42□□□□□ -0.9
BNIP3-202ENST00000540159 FAM236BA0A1B0GV22 79 aa9.42□□□□□ -0.9
BNIP3-202ENST00000540159 DAD1P61803 113 aa9.41□□□□□ -0.9
BNIP3-202ENST00000540159 RPL28P46779 137 aaKnown RBP9.41□□□□□ -0.9
BNIP3-202ENST00000540159 TRACP01848 142 aa9.4□□□□□ -0.9
BNIP3-202ENST00000540159 CHCHD10Q8WYQ3 142 aaPredicted RBP9.4□□□□□ -0.9
BNIP3-202ENST00000540159 NBEAL1Q6ZS30 2694 aa9.4□□□□□ -0.9
BNIP3-202ENST00000540159 IBA57-AS1B1ANH7 110 aa9.4□□□□□ -0.9
BNIP3-202ENST00000540159 KIR2DL5BQ8NHK3 375 aa9.39□□□□□ -0.91
BNIP3-202ENST00000540159 FAM110AQ9BQ89 295 aa9.39□□□□□ -0.91
BNIP3-202ENST00000540159 REG3AQ06141 175 aa9.39□□□□□ -0.91
BNIP3-202ENST00000540159 IGKV3D-7A0A0C4DH55 119 aa9.38□□□□□ -0.91
BNIP3-202ENST00000540159 C10orf25Q5T742 122 aa9.38□□□□□ -0.91
BNIP3-202ENST00000540159 Q8NDZ9 215 aa9.38□□□□□ -0.91
BNIP3-202ENST00000540159 KLK12Q9UKR0 248 aa9.38□□□□□ -0.91
BNIP3-202ENST00000540159 ANK2Q01484 3957 aa9.37□□□□□ -0.91
BNIP3-202ENST00000540159 SDIM1Q6ZPB5 146 aa9.37□□□□□ -0.91
BNIP3-202ENST00000540159 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
BNIP3-202ENST00000540159 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
BNIP3-202ENST00000540159 UNQ6190/PRO20217Q6UXQ8 127 aa9.36□□□□□ -0.91
BNIP3-202ENST00000540159 RETNQ9HD89 108 aa9.36□□□□□ -0.91
BNIP3-202ENST00000540159 COL6A5A8TX70 2615 aa9.35□□□□□ -0.91
BNIP3-202ENST00000540159 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
BNIP3-202ENST00000540159 FAM240AA0A1B0GVK7 77 aa9.34□□□□□ -0.91
BNIP3-202ENST00000540159 XAGE1AQ9HD64 81 aa9.33□□□□□ -0.92
BNIP3-202ENST00000540159 Q8IZM0 81 aa9.33□□□□□ -0.92
BNIP3-202ENST00000540159 A0A087WVE0 104 aa9.33□□□□□ -0.92
BNIP3-202ENST00000540159 A0A1B0GUV1 79 aa9.33□□□□□ -0.92
BNIP3-202ENST00000540159 C9orf66Q5T8R8 295 aa9.33□□□□□ -0.92
BNIP3-202ENST00000540159 LINC00612Q8N6U2 182 aa9.33□□□□□ -0.92
BNIP3-202ENST00000540159 KIAA0087Q14695 138 aa9.32□□□□□ -0.92
BNIP3-202ENST00000540159 C6orf99Q4VX62 202 aa9.32□□□□□ -0.92
BNIP3-202ENST00000540159 OXLD1Q5BKU9 147 aa9.32□□□□□ -0.92
BNIP3-202ENST00000540159 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
BNIP3-202ENST00000540159 LINC00846Q9NV44 126 aa9.32□□□□□ -0.92
BNIP3-202ENST00000540159 CXCL5P42830 114 aa9.31□□□□□ -0.92
BNIP3-202ENST00000540159 IGHV4-30-4P0DP06 118 aa9.31□□□□□ -0.92
BNIP3-202ENST00000540159 NANOS2P60321 138 aaKnown RBP9.31□□□□□ -0.92
BNIP3-202ENST00000540159 S100A7L2Q5SY68 101 aa9.31□□□□□ -0.92
BNIP3-202ENST00000540159 WFDC9Q8NEX5 89 aa9.31□□□□□ -0.92
BNIP3-202ENST00000540159 INAFM2P0DMQ5 153 aa9.3□□□□□ -0.92
BNIP3-202ENST00000540159 RPL18AQ02543 176 aaKnown RBP9.3□□□□□ -0.92
BNIP3-202ENST00000540159 SPAG11BQ08648 103 aa9.3□□□□□ -0.92
BNIP3-202ENST00000540159 HIGD2BQ4VC39 106 aa9.3□□□□□ -0.92
BNIP3-202ENST00000540159 Q6Q795 121 aa9.3□□□□□ -0.92
BNIP3-202ENST00000540159 H0YGX0 51 aa9.3□□□□□ -0.92
BNIP3-202ENST00000540159 LYRM9A8MSI8 78 aa9.29□□□□□ -0.92
BNIP3-202ENST00000540159 LINC00643Q86TS7 51 aa9.29□□□□□ -0.92
BNIP3-202ENST00000540159 Q8NAQ8 132 aa9.29□□□□□ -0.92
BNIP3-202ENST00000540159 ORMDL1Q9P0S3 153 aa9.29□□□□□ -0.92
BNIP3-202ENST00000540159 CYSRT1A8MQ03 144 aa9.28□□□□□ -0.92
BNIP3-202ENST00000540159 APOC4P55056 127 aa9.28□□□□□ -0.92
BNIP3-202ENST00000540159 TRBV7-7A0A0K0K1E9 115 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms