RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ANGP03950 147 aaKnown RBP4.38□□□□□ -1.71
PTPRD-214ENST00000540109 DOPEY1Q5JWR5 2465 aa4.38□□□□□ -1.71
PTPRD-214ENST00000540109 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
PTPRD-214ENST00000540109 WFDC10AQ9H1F0 79 aa4.38□□□□□ -1.71
PTPRD-214ENST00000540109 SPAG11BQ08648 103 aa4.38□□□□□ -1.71
PTPRD-214ENST00000540109 C4orf3Q8WVX3 66 aa4.38□□□□□ -1.71
PTPRD-214ENST00000540109 ZNF702PQ9H963 129 aa4.38□□□□□ -1.71
PTPRD-214ENST00000540109 RPL37AP8A6NKH3 93 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 UNQ9165/PRO28630Q6UXU0 137 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 WFDC13Q8IUB5 93 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 C1orf158Q8N1D5 194 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 LINC00269Q8N2A0 174 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 RNF223E7ERA6 249 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 C6orf99Q4VX62 202 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.37□□□□□ -1.71
PTPRD-214ENST00000540109 K7EQG2 157 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 MED13LQ71F56 2210 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 TSHBP01222 138 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 M0R378 163 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 IGKV4-1P06312 121 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
PTPRD-214ENST00000540109 ZNF73O43830 326 aaPredicted RBP4.36□□□□□ -1.71
PTPRD-214ENST00000540109 PRRC2CQ9Y520 2896 aaKnown RBP4.36□□□□□ -1.71
PTPRD-214ENST00000540109 AVPP01185 164 aa4.36□□□□□ -1.71
PTPRD-214ENST00000540109 Q8N814 137 aa4.36□□□□□ -1.71
PTPRD-214ENST00000540109 C11orf45Q8TAV5 145 aa4.36□□□□□ -1.71
PTPRD-214ENST00000540109 H0Y9J4 135 aa4.36□□□□□ -1.71
PTPRD-214ENST00000540109 A8MTW9 85 aa4.36□□□□□ -1.71
PTPRD-214ENST00000540109 CAMK2N2Q96S95 79 aa4.36□□□□□ -1.71
PTPRD-214ENST00000540109 TP53AIP1Q9HCN2 124 aa4.36□□□□□ -1.71
PTPRD-214ENST00000540109 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
PTPRD-214ENST00000540109 Q6ZQY7 126 aa4.35□□□□□ -1.71
PTPRD-214ENST00000540109 NOP10Q9NPE3 64 aaKnown RBP4.35□□□□□ -1.71
PTPRD-214ENST00000540109 VPS13AQ96RL7 3174 aa4.35□□□□□ -1.71
PTPRD-214ENST00000540109 RNASE3P12724 160 aaKnown RBP4.35□□□□□ -1.71
PTPRD-214ENST00000540109 PKD1L2Q7Z442 2459 aa4.35□□□□□ -1.71
PTPRD-214ENST00000540109 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
PTPRD-214ENST00000540109 IGLV5-45A0A087WSX0 123 aa4.35□□□□□ -1.71
PTPRD-214ENST00000540109 PRM2P04554 102 aa4.35□□□□□ -1.71
PTPRD-214ENST00000540109 NCOR2Q9Y618 2525 aa4.35□□□□□ -1.71
PTPRD-214ENST00000540109 IGHV4-30-4P0DP06 118 aa4.35□□□□□ -1.71
PTPRD-214ENST00000540109 IGLV5-39A0A0G2JS06 123 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
PTPRD-214ENST00000540109 TRBV6-8A0A0A6YYG3 113 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 J3QKU1 62 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 PROK1P58294 105 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 C14orf177Q52M58 125 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 LINC00208Q96KT6 92 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 RETNLBQ9BQ08 111 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 PRO0255Q9UI72 69 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 WDFY3Q8IZQ1 3526 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 CCL18P55774 89 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 LCA10Q71F78 164 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 C16orf95Q9H693 158 aa4.34□□□□□ -1.71
PTPRD-214ENST00000540109 PRRC2AP48634 2157 aaKnown RBP4.34□□□□□ -1.72
PTPRD-214ENST00000540109 TRAV10A0A0B4J240 114 aa4.33□□□□□ -1.72
PTPRD-214ENST00000540109 SPTBN4Q9H254 2564 aa4.33□□□□□ -1.72
PTPRD-214ENST00000540109 Q6ZVQ6 151 aa4.33□□□□□ -1.72
PTPRD-214ENST00000540109 BBC3Q96PG8 261 aaPredicted RBP4.33□□□□□ -1.72
PTPRD-214ENST00000540109 B9D2Q9BPU9 175 aa4.33□□□□□ -1.72
PTPRD-214ENST00000540109 DMDP11532 3685 aa4.33□□□□□ -1.72
PTPRD-214ENST00000540109 PRR9Q5T870 116 aa4.32□□□□□ -1.72
PTPRD-214ENST00000540109 A8MUN3 132 aa4.32□□□□□ -1.72
PTPRD-214ENST00000540109 ZNF575Q86XF7 245 aa4.32□□□□□ -1.72
PTPRD-214ENST00000540109 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
PTPRD-214ENST00000540109 ABCA2Q9BZC7 2435 aa4.32□□□□□ -1.72
PTPRD-214ENST00000540109 TM2D3Q9BRN9 247 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 MYO15AQ9UKN7 3530 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 SMIM1B2RUZ4 78 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 Q5XG85 94 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 Q6ZTI0 123 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 C7orf65Q6ZTY9 151 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 MGAQ8IWI9 3026 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 DMXL1Q9Y485 3027 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 KIF25-AS1Q9Y6Z4 181 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 CFAP54Q96N23 3096 aa4.31□□□□□ -1.72
PTPRD-214ENST00000540109 C6orf223Q8N319 242 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 CREBBPQ92793 2442 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 PRR3P79522 188 aaKnown RBP4.3□□□□□ -1.72
PTPRD-214ENST00000540109 EGFEM1PQ0D2K5 195 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 ASB16-AS1Q495Z4 193 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 KRTAP1-3Q8IUG1 177 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 FAM218AQ96MZ4 157 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 NBASA2RRP1 2371 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 LINC00242Q5T6M2 205 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 SPAG11AQ6PDA7 123 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 CDC42SE2Q9NRR3 84 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 SPART-AS1P0CW21 52 aa4.3□□□□□ -1.72
PTPRD-214ENST00000540109 DEFB136Q30KP8 78 aa4.29□□□□□ -1.72
PTPRD-214ENST00000540109 LINC00575Q6W349 94 aa4.29□□□□□ -1.72
PTPRD-214ENST00000540109 FREM2Q5SZK8 3169 aa4.29□□□□□ -1.72
PTPRD-214ENST00000540109 CHD8Q9HCK8 2581 aa4.29□□□□□ -1.72
PTPRD-214ENST00000540109 DSPP15924 2871 aaKnown RBP4.29□□□□□ -1.72
PTPRD-214ENST00000540109 GYPEP15421 78 aa4.29□□□□□ -1.72
PTPRD-214ENST00000540109 COX6A2Q02221 97 aa4.29□□□□□ -1.72
PTPRD-214ENST00000540109 DEFB116Q30KQ4 102 aa4.29□□□□□ -1.72
PTPRD-214ENST00000540109 PCOTHQ58A44 107 aa4.29□□□□□ -1.72
PTPRD-214ENST00000540109 SPANXA2-OT1Q8N9U9 137 aa4.28□□□□□ -1.72
PTPRD-214ENST00000540109 MAP6D1Q9H9H5 199 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms