RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 Q6ZTC4 211 aa13.91□□□□□ -0.18
PACSIN3-211ENST00000539589 CLPSL2Q6UWE3 100 aa13.91□□□□□ -0.18
PACSIN3-211ENST00000539589 VPS25Q9BRG1 176 aa13.91□□□□□ -0.18
PACSIN3-211ENST00000539589 PPDPFQ9H3Y8 114 aa13.91□□□□□ -0.18
PACSIN3-211ENST00000539589 LINC00269Q8N2A0 174 aa13.9□□□□□ -0.18
PACSIN3-211ENST00000539589 SOSTDC1Q6X4U4 206 aa13.9□□□□□ -0.18
PACSIN3-211ENST00000539589 PRKDCP78527 4128 aaKnown RBP13.89□□□□□ -0.19
PACSIN3-211ENST00000539589 TRIAP1O43715 76 aa13.89□□□□□ -0.19
PACSIN3-211ENST00000539589 LELP1Q5T871 98 aa13.89□□□□□ -0.19
PACSIN3-211ENST00000539589 LINC01561Q8N1V8 128 aa13.89□□□□□ -0.19
PACSIN3-211ENST00000539589 ANGP03950 147 aaKnown RBP13.88□□□□□ -0.19
PACSIN3-211ENST00000539589 RPL13AP40429 203 aaKnown RBP13.88□□□□□ -0.19
PACSIN3-211ENST00000539589 NANOS2P60321 138 aaKnown RBP13.88□□□□□ -0.19
PACSIN3-211ENST00000539589 COX6CP09669 75 aa13.88□□□□□ -0.19
PACSIN3-211ENST00000539589 SMCPP49901 116 aaPredicted RBP13.88□□□□□ -0.19
PACSIN3-211ENST00000539589 ATXN8Q156A1 80 aa13.87□□□□□ -0.19
PACSIN3-211ENST00000539589 C6orf226Q5I0X4 101 aa13.87□□□□□ -0.19
PACSIN3-211ENST00000539589 REG3AQ06141 175 aa13.86□□□□□ -0.19
PACSIN3-211ENST00000539589 CD164L2Q6UWJ8 174 aa13.86□□□□□ -0.19
PACSIN3-211ENST00000539589 C11orf45Q8TAV5 145 aa13.86□□□□□ -0.19
PACSIN3-211ENST00000539589 IBA57-AS1B1ANH7 110 aa13.85□□□□□ -0.19
PACSIN3-211ENST00000539589 J3QR89 54 aa13.85□□□□□ -0.19
PACSIN3-211ENST00000539589 LINC00158P58513 81 aa13.85□□□□□ -0.19
PACSIN3-211ENST00000539589 Q8N3U1 123 aa13.85□□□□□ -0.19
PACSIN3-211ENST00000539589 MIR7-3HGQ8N6C7 128 aa13.85□□□□□ -0.19
PACSIN3-211ENST00000539589 Q8IZM0 81 aa13.84□□□□□ -0.19
PACSIN3-211ENST00000539589 CHCHD10Q8WYQ3 142 aaPredicted RBP13.84□□□□□ -0.19
PACSIN3-211ENST00000539589 COX7A2LO14548 114 aa13.83□□□□□ -0.2
PACSIN3-211ENST00000539589 H3BNG1 76 aa13.82□□□□□ -0.2
PACSIN3-211ENST00000539589 C9JAW5 83 aa13.81□□□□□ -0.2
PACSIN3-211ENST00000539589 KRTAP21-3Q3LHN1 58 aa13.81□□□□□ -0.2
PACSIN3-211ENST00000539589 STAB2Q8WWQ8 2551 aa13.8□□□□□ -0.2
PACSIN3-211ENST00000539589 IGLV10-54A0A075B6I4 117 aa13.8□□□□□ -0.2
PACSIN3-211ENST00000539589 SLC25A20O43772 301 aa13.8□□□□□ -0.2
PACSIN3-211ENST00000539589 LYPD5Q6UWN5 251 aa13.8□□□□□ -0.2
PACSIN3-211ENST00000539589 LINC01620Q4KN68 170 aa13.8□□□□□ -0.2
PACSIN3-211ENST00000539589 DEFB131BA0A096LNP1 70 aa13.79□□□□□ -0.2
PACSIN3-211ENST00000539589 M0QXV9 152 aa13.79□□□□□ -0.2
PACSIN3-211ENST00000539589 MALP21145 153 aa13.79□□□□□ -0.2
PACSIN3-211ENST00000539589 TEN1Q86WV5 123 aa13.79□□□□□ -0.2
PACSIN3-211ENST00000539589 PFN2P35080 140 aa13.78□□□□□ -0.2
PACSIN3-211ENST00000539589 B9D2Q9BPU9 175 aa13.78□□□□□ -0.2
PACSIN3-211ENST00000539589 CKS1BP61024 79 aa13.78□□□□□ -0.2
PACSIN3-211ENST00000539589 SND1-IT1Q9HBX3 110 aa13.78□□□□□ -0.2
PACSIN3-211ENST00000539589 DYNC2H1Q8NCM8 4307 aaKnown RBP13.77□□□□□ -0.2
PACSIN3-211ENST00000539589 TRAV13-2A0A0B4J235 113 aa13.77□□□□□ -0.21
PACSIN3-211ENST00000539589 FOXI1Q12951 378 aa13.76□□□□□ -0.21
PACSIN3-211ENST00000539589 CXCL5P42830 114 aa13.76□□□□□ -0.21
PACSIN3-211ENST00000539589 CFAP161Q6P656 301 aa13.76□□□□□ -0.21
PACSIN3-211ENST00000539589 MEGF8Q7Z7M0 2845 aa13.76□□□□□ -0.21
PACSIN3-211ENST00000539589 CCL18P55774 89 aa13.75□□□□□ -0.21
PACSIN3-211ENST00000539589 CLEC2BQ92478 149 aa13.75□□□□□ -0.21
PACSIN3-211ENST00000539589 PRR34Q9NV39 138 aa13.75□□□□□ -0.21
PACSIN3-211ENST00000539589 KLK12Q9UKR0 248 aa13.75□□□□□ -0.21
PACSIN3-211ENST00000539589 KIAA0087Q14695 138 aa13.74□□□□□ -0.21
PACSIN3-211ENST00000539589 C2orf82Q6UX34 121 aa13.74□□□□□ -0.21
PACSIN3-211ENST00000539589 ANKRD29Q8N6D5 301 aa13.74□□□□□ -0.21
PACSIN3-211ENST00000539589 TRBV10-2A0A0K0K1G8 114 aa13.74□□□□□ -0.21
PACSIN3-211ENST00000539589 LST1O00453 97 aa13.74□□□□□ -0.21
PACSIN3-211ENST00000539589 CRPP02741 224 aa13.74□□□□□ -0.21
PACSIN3-211ENST00000539589 PPDPFLQ8WWR9 84 aa13.74□□□□□ -0.21
PACSIN3-211ENST00000539589 GAGE12HA6NDE8 117 aa13.72□□□□□ -0.21
PACSIN3-211ENST00000539589 LINC01600Q96MT4 127 aa13.72□□□□□ -0.21
PACSIN3-211ENST00000539589 IGKV2-28A0A075B6P5 120 aa13.71□□□□□ -0.22
PACSIN3-211ENST00000539589 TRAV10A0A0B4J240 114 aa13.71□□□□□ -0.22
PACSIN3-211ENST00000539589 IGKV2D-28P01615 120 aa13.71□□□□□ -0.22
PACSIN3-211ENST00000539589 COX17Q14061 63 aa13.7□□□□□ -0.22
PACSIN3-211ENST00000539589 ENHOQ6UWT2 76 aa13.7□□□□□ -0.22
PACSIN3-211ENST00000539589 LINC00337Q8N6G1 96 aa13.7□□□□□ -0.22
PACSIN3-211ENST00000539589 KLK5Q9Y337 293 aaPredicted RBP13.7□□□□□ -0.22
PACSIN3-211ENST00000539589 CARD19Q96LW7 228 aa13.69□□□□□ -0.22
PACSIN3-211ENST00000539589 ESRGQ1W209 222 aa13.68□□□□□ -0.22
PACSIN3-211ENST00000539589 DNAH7Q8WXX0 4024 aa13.68□□□□□ -0.22
PACSIN3-211ENST00000539589 TRAV8-4A0A0B4J246 113 aa13.68□□□□□ -0.22
PACSIN3-211ENST00000539589 H3BT86 120 aa13.67□□□□□ -0.22
PACSIN3-211ENST00000539589 RPL28P46779 137 aaKnown RBP13.67□□□□□ -0.22
PACSIN3-211ENST00000539589 WFDC10BQ8IUB3 73 aa13.67□□□□□ -0.22
PACSIN3-211ENST00000539589 UBE2WQ96B02 151 aa13.67□□□□□ -0.22
PACSIN3-211ENST00000539589 PLECQ15149 4684 aaKnown RBP13.66□□□□□ -0.22
PACSIN3-211ENST00000539589 CSMD3Q7Z407 3707 aa13.65□□□□□ -0.22
PACSIN3-211ENST00000539589 SPAG11BQ08648 103 aa13.65□□□□□ -0.22
PACSIN3-211ENST00000539589 NTN5Q8WTR8 489 aaPredicted RBP13.63□□□□□ -0.23
PACSIN3-211ENST00000539589 DNAH1Q9P2D7 4330 aa13.63□□□□□ -0.23
PACSIN3-211ENST00000539589 PCP4P48539 62 aa13.62□□□□□ -0.23
PACSIN3-211ENST00000539589 SMIM11BQ8TCY0 68 aa13.61□□□□□ -0.23
PACSIN3-211ENST00000539589 LYSTQ99698 3801 aa13.61□□□□□ -0.23
PACSIN3-211ENST00000539589 TRACP01848 142 aa13.61□□□□□ -0.23
PACSIN3-211ENST00000539589 OR13C6PQ8NH95 151 aa13.61□□□□□ -0.23
PACSIN3-211ENST00000539589 NHLRC4P0CG21 123 aaPredicted RBP13.6□□□□□ -0.23
PACSIN3-211ENST00000539589 C9orf116Q5BN46 136 aaPredicted RBP13.6□□□□□ -0.23
PACSIN3-211ENST00000539589 C6orf223Q8N319 242 aa13.6□□□□□ -0.23
PACSIN3-211ENST00000539589 C15orf53Q8NAA6 179 aa13.59□□□□□ -0.23
PACSIN3-211ENST00000539589 MUC7Q8TAX7 377 aa13.59□□□□□ -0.23
PACSIN3-211ENST00000539589 NDUFC2O95298 119 aa13.59□□□□□ -0.23
PACSIN3-211ENST00000539589 UNQ6190/PRO20217Q6UXQ8 127 aa13.59□□□□□ -0.23
PACSIN3-211ENST00000539589 TEX49A0A1B0GTD5 131 aa13.57□□□□□ -0.24
PACSIN3-211ENST00000539589 C10orf25Q5T742 122 aa13.57□□□□□ -0.24
PACSIN3-211ENST00000539589 SIGMAR1Q99720 223 aa13.57□□□□□ -0.24
PACSIN3-211ENST00000539589 H0YGX0 51 aa13.56□□□□□ -0.24
PACSIN3-211ENST00000539589 LINC00526Q96FQ7 95 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms