RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 CXCL6P80162 114 aa12.45□□□□□ -0.42
TRA2A-211ENST00000538367 PDE6GP18545 87 aa12.44□□□□□ -0.42
TRA2A-211ENST00000538367 Q6ZQT0 140 aa12.44□□□□□ -0.42
TRA2A-211ENST00000538367 CENPEQ02224 2701 aa12.44□□□□□ -0.42
TRA2A-211ENST00000538367 ASH1LQ9NR48 2969 aaKnown RBP12.43□□□□□ -0.42
TRA2A-211ENST00000538367 C10orf99Q6UWK7 81 aa12.43□□□□□ -0.42
TRA2A-211ENST00000538367 ZNF561-AS1K7EIQ3 104 aa12.42□□□□□ -0.42
TRA2A-211ENST00000538367 MSMBP08118 114 aa12.42□□□□□ -0.42
TRA2A-211ENST00000538367 NANOS2P60321 138 aaKnown RBP12.42□□□□□ -0.42
TRA2A-211ENST00000538367 B4DSR2 109 aa12.41□□□□□ -0.42
TRA2A-211ENST00000538367 FP248Q71RG6 208 aaPredicted RBP12.41□□□□□ -0.42
TRA2A-211ENST00000538367 VPS13CQ709C8 3753 aa12.41□□□□□ -0.42
TRA2A-211ENST00000538367 CSMD2Q7Z408 3487 aa12.41□□□□□ -0.42
TRA2A-211ENST00000538367 A0A096LNT2 108 aa12.41□□□□□ -0.42
TRA2A-211ENST00000538367 POLQO75417 2590 aa12.4□□□□□ -0.42
TRA2A-211ENST00000538367 ABCA12Q86UK0 2595 aa12.4□□□□□ -0.42
TRA2A-211ENST00000538367 LINC01547P58512 204 aaPredicted RBP12.4□□□□□ -0.42
TRA2A-211ENST00000538367 RBM3P98179 157 aaKnown RBP12.4□□□□□ -0.42
TRA2A-211ENST00000538367 C6orf223Q8N319 242 aa12.4□□□□□ -0.42
TRA2A-211ENST00000538367 Q8IZM0 81 aa12.4□□□□□ -0.43
TRA2A-211ENST00000538367 C1orf43Q9BWL3 253 aa12.4□□□□□ -0.43
TRA2A-211ENST00000538367 APCP25054 2843 aa12.39□□□□□ -0.43
TRA2A-211ENST00000538367 C9orf66Q5T8R8 295 aa12.38□□□□□ -0.43
TRA2A-211ENST00000538367 GCN1Q92616 2671 aaKnown RBP12.38□□□□□ -0.43
TRA2A-211ENST00000538367 CR1P17927 2039 aa12.38□□□□□ -0.43
TRA2A-211ENST00000538367 ERC2-IT1O76042 136 aa12.38□□□□□ -0.43
TRA2A-211ENST00000538367 COX17Q14061 63 aa12.38□□□□□ -0.43
TRA2A-211ENST00000538367 C1orf158Q8N1D5 194 aa12.38□□□□□ -0.43
TRA2A-211ENST00000538367 LINC01356Q8N9X3 169 aa12.38□□□□□ -0.43
TRA2A-211ENST00000538367 NBPF19A0A087WUL8 3843 aa12.38□□□□□ -0.43
TRA2A-211ENST00000538367 F8WEM9 126 aa12.37□□□□□ -0.43
TRA2A-211ENST00000538367 C6orf226Q5I0X4 101 aa12.37□□□□□ -0.43
TRA2A-211ENST00000538367 Q6ZTI0 123 aa12.37□□□□□ -0.43
TRA2A-211ENST00000538367 NAV2Q8IVL1 2488 aa12.36□□□□□ -0.43
TRA2A-211ENST00000538367 IGHV4-59P01825 116 aa12.36□□□□□ -0.43
TRA2A-211ENST00000538367 Q6ZVQ6 151 aa12.36□□□□□ -0.43
TRA2A-211ENST00000538367 KRTAP1-3Q8IUG1 177 aa12.36□□□□□ -0.43
TRA2A-211ENST00000538367 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.36□□□□□ -0.438e-11■■■□□ 14.9
TRA2A-211ENST00000538367 TRBV7-6A0A0J9YX20 115 aa12.35□□□□□ -0.43
TRA2A-211ENST00000538367 SLURP1P55000 103 aa12.35□□□□□ -0.43
TRA2A-211ENST00000538367 LINC00575Q6W349 94 aa12.35□□□□□ -0.43
TRA2A-211ENST00000538367 MAPK1IP1LQ8NDC0 245 aa12.35□□□□□ -0.43
TRA2A-211ENST00000538367 DYNLRB2Q8TF09 96 aa12.35□□□□□ -0.43
TRA2A-211ENST00000538367 TRBV6-8A0A0A6YYG3 113 aa12.34□□□□□ -0.43
TRA2A-211ENST00000538367 TRBV7-4A0A0J9YYF1 115 aa12.34□□□□□ -0.43
TRA2A-211ENST00000538367 RMI2Q96E14 147 aa12.34□□□□□ -0.43
TRA2A-211ENST00000538367 IGLV4-60A0A075B6I1 120 aa12.33□□□□□ -0.44
TRA2A-211ENST00000538367 LINC00959A0A1B0GUT2 108 aa12.32□□□□□ -0.44
TRA2A-211ENST00000538367 MUC7Q8TAX7 377 aa12.32□□□□□ -0.44
TRA2A-211ENST00000538367 TRAV10A0A0B4J240 114 aa12.32□□□□□ -0.44
TRA2A-211ENST00000538367 IGHV4-31P0DP07 118 aa12.32□□□□□ -0.44
TRA2A-211ENST00000538367 RPL35AP18077 110 aaKnown RBP12.32□□□□□ -0.44
TRA2A-211ENST00000538367 DEFB114Q30KQ6 69 aa12.32□□□□□ -0.44
TRA2A-211ENST00000538367 DEFB112Q30KQ8 113 aa12.32□□□□□ -0.44
TRA2A-211ENST00000538367 STHQ8IWL8 128 aa12.32□□□□□ -0.44
TRA2A-211ENST00000538367 ZNF702PQ9H963 129 aa12.31□□□□□ -0.44
TRA2A-211ENST00000538367 SNURFQ9Y675 71 aa12.31□□□□□ -0.44
TRA2A-211ENST00000538367 SORL1Q92673 2214 aa12.31□□□□□ -0.44
TRA2A-211ENST00000538367 MAP1AP78559 2803 aaPredicted RBP12.3□□□□□ -0.44
TRA2A-211ENST00000538367 MIFP14174 115 aa12.3□□□□□ -0.44
TRA2A-211ENST00000538367 IGKV3OR2-268A0A0C4DH90 116 aa12.29□□□□□ -0.44
TRA2A-211ENST00000538367 AVPP01185 164 aa12.29□□□□□ -0.44
TRA2A-211ENST00000538367 HAMPP81172 84 aa12.29□□□□□ -0.44
TRA2A-211ENST00000538367 WFDC11Q8NEX6 87 aa12.29□□□□□ -0.44
TRA2A-211ENST00000538367 C16orf74Q96GX8 76 aa12.29□□□□□ -0.44
TRA2A-211ENST00000538367 C6orf99Q4VX62 202 aa12.28□□□□□ -0.44
TRA2A-211ENST00000538367 C4orf3Q8WVX3 66 aa12.28□□□□□ -0.44
TRA2A-211ENST00000538367 FASNP49327 2511 aaKnown RBP12.28□□□□□ -0.44
TRA2A-211ENST00000538367 ODF3L2Q3SX64 289 aa12.28□□□□□ -0.44
TRA2A-211ENST00000538367 IGHV4-28A0A0C4DH34 117 aa12.27□□□□□ -0.45
TRA2A-211ENST00000538367 Q8N3U1 123 aa12.27□□□□□ -0.45
TRA2A-211ENST00000538367 LAMTOR3Q9UHA4 124 aa12.27□□□□□ -0.45
TRA2A-211ENST00000538367 PDZD2O15018 2839 aa12.26□□□□□ -0.45
TRA2A-211ENST00000538367 NOP10Q9NPE3 64 aaKnown RBP12.26□□□□□ -0.45
TRA2A-211ENST00000538367 UNC79Q9P2D8 2635 aa12.25□□□□□ -0.45
TRA2A-211ENST00000538367 A0A1B0GUV1 79 aa12.25□□□□□ -0.45
TRA2A-211ENST00000538367 TRGV2A0A075B6R0 118 aa12.24□□□□□ -0.45
TRA2A-211ENST00000538367 NREPQ16612 68 aa12.24□□□□□ -0.45
TRA2A-211ENST00000538367 PKIGQ9Y2B9 76 aa12.24□□□□□ -0.45
TRA2A-211ENST00000538367 SVEP1Q4LDE5 3571 aa12.24□□□□□ -0.45
TRA2A-211ENST00000538367 LOC100131303A0A0U1RQF7 123 aa12.23□□□□□ -0.45
TRA2A-211ENST00000538367 TRGV4A0A0C4DH28 118 aa12.23□□□□□ -0.45
TRA2A-211ENST00000538367 PLAC8L1A1L4L8 177 aa12.23□□□□□ -0.45
TRA2A-211ENST00000538367 RNASE1P07998 156 aaKnown RBP12.23□□□□□ -0.45
TRA2A-211ENST00000538367 DEFB136Q30KP8 78 aa12.23□□□□□ -0.45
TRA2A-211ENST00000538367 C1orf195Q5TG92 126 aa12.23□□□□□ -0.45
TRA2A-211ENST00000538367 TMEM254Q8TBM7 123 aa12.23□□□□□ -0.45
TRA2A-211ENST00000538367 TM2D3Q9BRN9 247 aa12.22□□□□□ -0.45
TRA2A-211ENST00000538367 C11orf68Q9H3H3 251 aaKnown RBP12.22□□□□□ -0.45
TRA2A-211ENST00000538367 V9GYY9 64 aa12.22□□□□□ -0.45
TRA2A-211ENST00000538367 ITPR2Q14571 2701 aa12.22□□□□□ -0.45
TRA2A-211ENST00000538367 CREBBPQ92793 2442 aa12.22□□□□□ -0.45
TRA2A-211ENST00000538367 CMC4P56277 68 aaPredicted RBP12.21□□□□□ -0.45
TRA2A-211ENST00000538367 BRK1Q8WUW1 75 aa12.21□□□□□ -0.45
TRA2A-211ENST00000538367 LINC00474Q9P2X8 69 aa12.21□□□□□ -0.45
TRA2A-211ENST00000538367 CELSR1Q9NYQ6 3014 aa12.21□□□□□ -0.46
TRA2A-211ENST00000538367 ITPR3Q14573 2671 aa12.21□□□□□ -0.46
TRA2A-211ENST00000538367 FSHBP01225 129 aa12.2□□□□□ -0.46
TRA2A-211ENST00000538367 PRR3P79522 188 aaKnown RBP12.2□□□□□ -0.46
TRA2A-211ENST00000538367 HECTD1Q9ULT8 2610 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms