RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.18
SPARC-207ENST00000537849 USP17L23D6RBM5 183 aa7.71□□□□□ -1.18
SPARC-207ENST00000537849 HERV-K104P63124 156 aa7.71□□□□□ -1.18
SPARC-207ENST00000537849 CTAG1AP78358 180 aa7.71□□□□□ -1.18
SPARC-207ENST00000537849 C10orf25Q5T742 122 aa7.71□□□□□ -1.18
SPARC-207ENST00000537849 UNQ6190/PRO20217Q6UXQ8 127 aa7.71□□□□□ -1.18
SPARC-207ENST00000537849 LITAFQ99732 161 aa7.71□□□□□ -1.18
SPARC-207ENST00000537849 SACSQ9NZJ4 4579 aa7.71□□□□□ -1.18
SPARC-207ENST00000537849 WFDC2Q14508 124 aa7.7□□□□□ -1.18
SPARC-207ENST00000537849 HIGD2BQ4VC39 106 aa7.7□□□□□ -1.18
SPARC-207ENST00000537849 ADAMTSL4-AS1Q5T5F5 129 aa7.7□□□□□ -1.18
SPARC-207ENST00000537849 SCGB1D4Q6XE38 83 aa7.7□□□□□ -1.18
SPARC-207ENST00000537849 C2orf48Q96LS8 159 aa7.7□□□□□ -1.18
SPARC-207ENST00000537849 DNAH17Q9UFH2 4485 aa7.69□□□□□ -1.18
SPARC-207ENST00000537849 LRCOL1A6NCL2 159 aa7.69□□□□□ -1.18
SPARC-207ENST00000537849 LINC00587B1AMM8 73 aa7.69□□□□□ -1.18
SPARC-207ENST00000537849 ZNF561-AS1K7EIQ3 104 aa7.69□□□□□ -1.18
SPARC-207ENST00000537849 TIMM17BO60830 172 aa7.69□□□□□ -1.18
SPARC-207ENST00000537849 SLPIP03973 132 aa7.69□□□□□ -1.18
SPARC-207ENST00000537849 CXCL5P42830 114 aa7.69□□□□□ -1.18
SPARC-207ENST00000537849 CKS1BP61024 79 aa7.69□□□□□ -1.18
SPARC-207ENST00000537849 HYDINQ4G0P3 5121 aa7.68□□□□□ -1.18
SPARC-207ENST00000537849 F8WDY8 70 aa7.68□□□□□ -1.18
SPARC-207ENST00000537849 LECT2O14960 151 aa7.68□□□□□ -1.18
SPARC-207ENST00000537849 SFTA2Q6UW10 78 aa7.68□□□□□ -1.18
SPARC-207ENST00000537849 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
SPARC-207ENST00000537849 PSCAO43653 123 aa7.67□□□□□ -1.18
SPARC-207ENST00000537849 SMIM13P0DJ93 91 aa7.67□□□□□ -1.18
SPARC-207ENST00000537849 TAL2Q16559 108 aa7.67□□□□□ -1.18
SPARC-207ENST00000537849 FRAS1Q86XX4 4008 aa7.67□□□□□ -1.18
SPARC-207ENST00000537849 HSD52Q0P140 79 aa7.66□□□□□ -1.18
SPARC-207ENST00000537849 C9orf116Q5BN46 136 aaPredicted RBP7.66□□□□□ -1.18
SPARC-207ENST00000537849 C1orf134Q5TEV5 83 aa7.66□□□□□ -1.18
SPARC-207ENST00000537849 Q6ZRU5 148 aa7.66□□□□□ -1.18
SPARC-207ENST00000537849 SPANXDQ9BXN6 97 aa7.66□□□□□ -1.18
SPARC-207ENST00000537849 SPANXCQ9NY87 97 aa7.66□□□□□ -1.18
SPARC-207ENST00000537849 C6orf48Q9UBA6 75 aa7.66□□□□□ -1.18
SPARC-207ENST00000537849 A0A0U1RRA0 63 aa7.65□□□□□ -1.18
SPARC-207ENST00000537849 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
SPARC-207ENST00000537849 CIRBPQ14011 172 aaKnown RBP7.65□□□□□ -1.18
SPARC-207ENST00000537849 MEIG1Q5JSS6 88 aa7.65□□□□□ -1.18
SPARC-207ENST00000537849 CAMK2N2Q96S95 79 aa7.65□□□□□ -1.18
SPARC-207ENST00000537849 HIST1H4GQ99525 98 aa7.65□□□□□ -1.18
SPARC-207ENST00000537849 ERG28Q9UKR5 140 aa7.65□□□□□ -1.18
SPARC-207ENST00000537849 TRBV30A0A0K0K1B3 111 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 LCE6AA0A183 80 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 TMEM238C9JI98 176 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 EIF4EBP3O60516 100 aaPredicted RBP7.64□□□□□ -1.19
SPARC-207ENST00000537849 PFN2P35080 140 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 HINT1P49773 126 aaPredicted RBP7.64□□□□□ -1.19
SPARC-207ENST00000537849 PTTG1IPP53801 180 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 SYCNQ0VAF6 134 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 BVES-AS1Q5T3Y7 98 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 Q6ZVH6 145 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 MUSTN1Q8IVN3 82 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 CEND1Q8N111 149 aa7.64□□□□□ -1.19
SPARC-207ENST00000537849 LINC00158P58513 81 aa7.63□□□□□ -1.19
SPARC-207ENST00000537849 COX17Q14061 63 aa7.63□□□□□ -1.19
SPARC-207ENST00000537849 RNF151Q2KHN1 245 aa7.63□□□□□ -1.19
SPARC-207ENST00000537849 DAND5Q8N907 189 aa7.63□□□□□ -1.19
SPARC-207ENST00000537849 HECTD4Q9Y4D8 3996 aa7.63□□□□□ -1.19
SPARC-207ENST00000537849 C14orf177Q52M58 125 aa7.62□□□□□ -1.19
SPARC-207ENST00000537849 SOSTDC1Q6X4U4 206 aa7.62□□□□□ -1.19
SPARC-207ENST00000537849 MIR7-3HGQ8N6C7 128 aa7.62□□□□□ -1.19
SPARC-207ENST00000537849 SNHG12Q9BXW3 62 aa7.62□□□□□ -1.19
SPARC-207ENST00000537849 A0A087WTM6 91 aa7.61□□□□□ -1.19
SPARC-207ENST00000537849 M0R143 59 aa7.61□□□□□ -1.19
SPARC-207ENST00000537849 RTL8CO15255 209 aa7.61□□□□□ -1.19
SPARC-207ENST00000537849 IFITM1P13164 125 aa7.61□□□□□ -1.19
SPARC-207ENST00000537849 GCSHP23434 173 aa7.61□□□□□ -1.19
SPARC-207ENST00000537849 FXYD2P54710 66 aa7.61□□□□□ -1.19
SPARC-207ENST00000537849 LINC00308Q8TCZ7 52 aa7.61□□□□□ -1.19
SPARC-207ENST00000537849 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
SPARC-207ENST00000537849 LOC107984156A0A0G2JMH3 177 aa7.6□□□□□ -1.19
SPARC-207ENST00000537849 CNBPP62633 177 aaKnown RBP7.6□□□□□ -1.19
SPARC-207ENST00000537849 ARL17AQ8IVW1 177 aa7.6□□□□□ -1.19
SPARC-207ENST00000537849 CARD19Q96LW7 228 aa7.6□□□□□ -1.19
SPARC-207ENST00000537849 PPDPFQ9H3Y8 114 aa7.6□□□□□ -1.19
SPARC-207ENST00000537849 TLX1NBP0CAT3 122 aa7.59□□□□□ -1.19
SPARC-207ENST00000537849 NPC2P61916 151 aa7.59□□□□□ -1.19
SPARC-207ENST00000537849 EREGO14944 169 aa7.58□□□□□ -1.2
SPARC-207ENST00000537849 TNP2Q05952 138 aa7.58□□□□□ -1.2
SPARC-207ENST00000537849 Q8N814 137 aa7.58□□□□□ -1.2
SPARC-207ENST00000537849 SND1-IT1Q9HBX3 110 aa7.58□□□□□ -1.2
SPARC-207ENST00000537849 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
SPARC-207ENST00000537849 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.57□□□□□ -1.2
SPARC-207ENST00000537849 A4D1N5 150 aa7.57□□□□□ -1.2
SPARC-207ENST00000537849 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
SPARC-207ENST00000537849 BATFQ16520 125 aa7.57□□□□□ -1.2
SPARC-207ENST00000537849 Q6ZRP5 223 aa7.57□□□□□ -1.2
SPARC-207ENST00000537849 A0A1B0GWB2 263 aa7.56□□□□□ -1.2
SPARC-207ENST00000537849 CFC1BP0CG36 223 aa7.56□□□□□ -1.2
SPARC-207ENST00000537849 CFC1P0CG37 223 aa7.56□□□□□ -1.2
SPARC-207ENST00000537849 RPL24P83731 157 aaKnown RBP7.56□□□□□ -1.2
SPARC-207ENST00000537849 C9orf163Q8N9P6 203 aa7.56□□□□□ -1.2
SPARC-207ENST00000537849 RYR2Q92736 4967 aa7.56□□□□□ -1.2
SPARC-207ENST00000537849 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.55□□□□□ -1.2
SPARC-207ENST00000537849 COPS9Q8WXC6 57 aa7.55□□□□□ -1.2
SPARC-207ENST00000537849 LOC107984640A0A0U1RRK4 108 aa7.54□□□□□ -1.2
SPARC-207ENST00000537849 Q8NDZ9 215 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms