RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 A0A096LNI7 61 aa3.83□□□□□ -1.8
PTPRD-213ENST00000537002 HIGD2AQ9BW72 106 aa3.83□□□□□ -1.8
PTPRD-213ENST00000537002 A8MTW9 85 aa3.82□□□□□ -1.8
PTPRD-213ENST00000537002 Q6ZRU5 148 aa3.82□□□□□ -1.8
PTPRD-213ENST00000537002 TRAV10A0A0B4J240 114 aa3.82□□□□□ -1.8
PTPRD-213ENST00000537002 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.82□□□□□ -1.8
PTPRD-213ENST00000537002 Q8IZM0 81 aa3.82□□□□□ -1.8
PTPRD-213ENST00000537002 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
PTPRD-213ENST00000537002 PTPRQQ9UMZ3 2332 aa3.82□□□□□ -1.8
PTPRD-213ENST00000537002 SPART-AS1P0CW21 52 aa3.81□□□□□ -1.8
PTPRD-213ENST00000537002 CD164L2Q6UWJ8 174 aa3.81□□□□□ -1.8
PTPRD-213ENST00000537002 C18orf65Q6ZTR6 163 aa3.81□□□□□ -1.8
PTPRD-213ENST00000537002 OTOGLQ3ZCN5 2332 aa3.81□□□□□ -1.8
PTPRD-213ENST00000537002 WFDC10AQ9H1F0 79 aa3.81□□□□□ -1.8
PTPRD-213ENST00000537002 LINC00208Q96KT6 92 aa3.81□□□□□ -1.8
PTPRD-213ENST00000537002 OXTP01178 125 aa3.81□□□□□ -1.8
PTPRD-213ENST00000537002 LINC00474Q9P2X8 69 aa3.81□□□□□ -1.8
PTPRD-213ENST00000537002 AKAP6Q13023 2319 aa3.8□□□□□ -1.8
PTPRD-213ENST00000537002 M0R378 163 aa3.8□□□□□ -1.8
PTPRD-213ENST00000537002 IGLV1-40P01703 118 aa3.8□□□□□ -1.8
PTPRD-213ENST00000537002 Q9UF83 564 aa3.8□□□□□ -1.8
PTPRD-213ENST00000537002 C6orf223Q8N319 242 aa3.8□□□□□ -1.8
PTPRD-213ENST00000537002 UNQ6190/PRO20217Q6UXQ8 127 aa3.8□□□□□ -1.8
PTPRD-213ENST00000537002 LINC00575Q6W349 94 aa3.8□□□□□ -1.8
PTPRD-213ENST00000537002 C22orf24Q9Y442 160 aa3.8□□□□□ -1.8
PTPRD-213ENST00000537002 RPL37AP8A6NKH3 93 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 IGKV2-24A0A0C4DH68 120 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 CYSRT1A8MQ03 144 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 INAFM1C9JVW0 142 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 TRBV7-4A0A0J9YYF1 115 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 VPREB1P12018 145 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 Q6ZQT0 140 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 TM2D3Q9BRN9 247 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 Q1T7F1 81 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 C11orf71Q6IPW1 123 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 C16orf95Q9H693 158 aa3.79□□□□□ -1.8
PTPRD-213ENST00000537002 C2CD3Q4AC94 2353 aa3.78□□□□□ -1.8
PTPRD-213ENST00000537002 FP248Q71RG6 208 aaPredicted RBP3.78□□□□□ -1.8
PTPRD-213ENST00000537002 DEFB116Q30KQ4 102 aa3.78□□□□□ -1.8
PTPRD-213ENST00000537002 DHRS4-AS1Q9P1J3 65 aa3.78□□□□□ -1.8
PTPRD-213ENST00000537002 SPATA3Q8NHX4 192 aa3.78□□□□□ -1.8
PTPRD-213ENST00000537002 FAM208BQ5VWN6 2430 aa3.78□□□□□ -1.81
PTPRD-213ENST00000537002 FAM104AQ969W3 186 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 IGHV4-30-4P0DP06 118 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 IGHV4-31P0DP07 118 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 PCOTHQ58A44 107 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 TRANK1O15050 2925 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 SRCAPQ6ZRS2 3230 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 BDP1A6H8Y1 2624 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 C1orf137Q5JT78 98 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.77□□□□□ -1.81
PTPRD-213ENST00000537002 CASC2Q6XLA1 102 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 CYSTM1Q9H1C7 97 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 ZNF702PQ9H963 129 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 DNAH12Q6ZR08 3092 aa3.77□□□□□ -1.81
PTPRD-213ENST00000537002 SYCNQ0VAF6 134 aa3.76□□□□□ -1.81
PTPRD-213ENST00000537002 LIMD2Q9BT23 127 aa3.76□□□□□ -1.81
PTPRD-213ENST00000537002 C10orf25Q5T742 122 aa3.76□□□□□ -1.81
PTPRD-213ENST00000537002 Q6YL49 198 aa3.76□□□□□ -1.81
PTPRD-213ENST00000537002 MED13LQ71F56 2210 aa3.76□□□□□ -1.81
PTPRD-213ENST00000537002 IGHV3OR16-9A0A0B4J2B5 98 aa3.76□□□□□ -1.81
PTPRD-213ENST00000537002 C11orf72Q8NBR9 251 aa3.76□□□□□ -1.81
PTPRD-213ENST00000537002 B9D2Q9BPU9 175 aa3.76□□□□□ -1.81
PTPRD-213ENST00000537002 CYP4F30PQ9H0H9 118 aa3.76□□□□□ -1.81
PTPRD-213ENST00000537002 ELOF1P60002 83 aaKnown RBP3.76□□□□□ -1.81
PTPRD-213ENST00000537002 ACACBO00763 2458 aa3.75□□□□□ -1.81
PTPRD-213ENST00000537002 A0A1B0GUV1 79 aa3.75□□□□□ -1.81
PTPRD-213ENST00000537002 H3BPC8 53 aa3.75□□□□□ -1.81
PTPRD-213ENST00000537002 ODF3L2Q3SX64 289 aa3.75□□□□□ -1.81
PTPRD-213ENST00000537002 HCG22E2RYF7 251 aa3.75□□□□□ -1.81
PTPRD-213ENST00000537002 H0Y9P7 68 aa3.75□□□□□ -1.81
PTPRD-213ENST00000537002 TLN1Q9Y490 2541 aaKnown RBP3.74□□□□□ -1.81
PTPRD-213ENST00000537002 LINC01006Q8NI28 216 aa3.74□□□□□ -1.81
PTPRD-213ENST00000537002 KRTAP10-9P60411 292 aa3.73□□□□□ -1.81
PTPRD-213ENST00000537002 HIVEP2P31629 2446 aa3.73□□□□□ -1.81
PTPRD-213ENST00000537002 CDSNQ15517 529 aa3.73□□□□□ -1.81
PTPRD-213ENST00000537002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.73□□□□□ -1.81
PTPRD-213ENST00000537002 NOTCH3Q9UM47 2321 aa3.73□□□□□ -1.81
PTPRD-213ENST00000537002 A8MUN3 132 aa3.73□□□□□ -1.81
PTPRD-213ENST00000537002 C9orf129Q5T035 196 aaKnown RBP3.73□□□□□ -1.81
PTPRD-213ENST00000537002 KPRPQ5T749 579 aaPredicted RBP3.73□□□□□ -1.81
PTPRD-213ENST00000537002 AVPP01185 164 aa3.72□□□□□ -1.81
PTPRD-213ENST00000537002 SORL1Q92673 2214 aa3.72□□□□□ -1.81
PTPRD-213ENST00000537002 hDV103S1A0JD37 113 aa3.72□□□□□ -1.81
PTPRD-213ENST00000537002 ATP11AUNQ6ZP68 121 aa3.72□□□□□ -1.81
PTPRD-213ENST00000537002 LELP1Q5T871 98 aa3.72□□□□□ -1.81
PTPRD-213ENST00000537002 A0A087WSZ3 146 aa3.72□□□□□ -1.81
PTPRD-213ENST00000537002 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
PTPRD-213ENST00000537002 CACNA1AO00555 2505 aa3.71□□□□□ -1.82
PTPRD-213ENST00000537002 EGFEM1PQ0D2K5 195 aa3.71□□□□□ -1.82
PTPRD-213ENST00000537002 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
PTPRD-213ENST00000537002 WNK1Q9H4A3 2382 aa3.71□□□□□ -1.82
PTPRD-213ENST00000537002 SERTAD4-AS1Q5TG53 156 aa3.71□□□□□ -1.82
PTPRD-213ENST00000537002 SPINK6Q6UWN8 80 aa3.71□□□□□ -1.82
PTPRD-213ENST00000537002 C1orf64Q8NEQ6 169 aa3.71□□□□□ -1.82
PTPRD-213ENST00000537002 NBASA2RRP1 2371 aa3.71□□□□□ -1.82
PTPRD-213ENST00000537002 FSHBP01225 129 aa3.7□□□□□ -1.82
PTPRD-213ENST00000537002 MYO9AB2RTY4 2548 aa3.7□□□□□ -1.82
PTPRD-213ENST00000537002 CHD9Q3L8U1 2897 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms