RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
PRKDC-207ENST00000536483 RPL39P62891 51 aaKnown RBP7.89□□□□□ -1.15
PRKDC-207ENST00000536483 HIGD2BQ4VC39 106 aa7.89□□□□□ -1.15
PRKDC-207ENST00000536483 Q6ZUT4 128 aa7.89□□□□□ -1.15
PRKDC-207ENST00000536483 LINC00173Q6ZV60 143 aa7.89□□□□□ -1.15
PRKDC-207ENST00000536483 PLAC8Q9NZF1 115 aa7.89□□□□□ -1.15
PRKDC-207ENST00000536483 PKIGQ9Y2B9 76 aa7.88□□□□□ -1.15
PRKDC-207ENST00000536483 LRP2P98164 4655 aa7.87□□□□□ -1.15
PRKDC-207ENST00000536483 TRAV12-1A0A0B4J245 112 aa7.87□□□□□ -1.15
PRKDC-207ENST00000536483 IGHV3OR16-9A0A0B4J2B5 98 aa7.87□□□□□ -1.15
PRKDC-207ENST00000536483 COX7A2LO14548 114 aa7.87□□□□□ -1.15
PRKDC-207ENST00000536483 NPSP0C0P6 89 aa7.87□□□□□ -1.15
PRKDC-207ENST00000536483 COX6A2Q02221 97 aa7.87□□□□□ -1.15
PRKDC-207ENST00000536483 Q6ZN92 141 aa7.87□□□□□ -1.15
PRKDC-207ENST00000536483 TOMM6Q96B49 74 aa7.87□□□□□ -1.15
PRKDC-207ENST00000536483 A0A087WYN8 130 aa7.86□□□□□ -1.15
PRKDC-207ENST00000536483 TRAV13-1A0A0B4J241 112 aa7.86□□□□□ -1.15
PRKDC-207ENST00000536483 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.86□□□□□ -1.15
PRKDC-207ENST00000536483 DLEU1O43261 78 aa7.86□□□□□ -1.15
PRKDC-207ENST00000536483 SLC25A34Q6PIV7 304 aa7.86□□□□□ -1.15
PRKDC-207ENST00000536483 Q6ZRU5 148 aa7.86□□□□□ -1.15
PRKDC-207ENST00000536483 C2orf48Q96LS8 159 aa7.86□□□□□ -1.15
PRKDC-207ENST00000536483 F8WDY8 70 aa7.85□□□□□ -1.15
PRKDC-207ENST00000536483 ZNF561-AS1K7EIQ3 104 aa7.85□□□□□ -1.15
PRKDC-207ENST00000536483 COX8AP10176 69 aa7.85□□□□□ -1.15
PRKDC-207ENST00000536483 SYCNQ0VAF6 134 aa7.85□□□□□ -1.15
PRKDC-207ENST00000536483 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
PRKDC-207ENST00000536483 ATOH7Q8N100 152 aa7.85□□□□□ -1.15
PRKDC-207ENST00000536483 DPH3Q96FX2 82 aa7.85□□□□□ -1.15
PRKDC-207ENST00000536483 LINC00474Q9P2X8 69 aa7.85□□□□□ -1.15
PRKDC-207ENST00000536483 TNXBP22105 4242 aa7.85□□□□□ -1.15
PRKDC-207ENST00000536483 CHTF8P0CG12 524 aa7.84□□□□□ -1.15
PRKDC-207ENST00000536483 ODF1Q14990 250 aa7.84□□□□□ -1.15
PRKDC-207ENST00000536483 PAPPA-AS1Q5QFB9 102 aa7.84□□□□□ -1.15
PRKDC-207ENST00000536483 ERASQ7Z444 233 aa7.84□□□□□ -1.15
PRKDC-207ENST00000536483 TMEM141Q96I45 108 aa7.84□□□□□ -1.15
PRKDC-207ENST00000536483 CARD19Q96LW7 228 aa7.84□□□□□ -1.15
PRKDC-207ENST00000536483 OPRPNQ99935 248 aaPredicted RBP7.84□□□□□ -1.15
PRKDC-207ENST00000536483 SNHG12Q9BXW3 62 aa7.84□□□□□ -1.15
PRKDC-207ENST00000536483 IGLV4-69A0A075B6H9 119 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 IGLV4-3A0A075B6K6 122 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 DPM2O94777 84 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 APOMO95445 188 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 IGKCP01834 107 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 MALP21145 153 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 PLNP26678 52 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 RNF151Q2KHN1 245 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 COL5A1-AS1Q5SY13 56 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 SCGB3A1Q96QR1 104 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 CYSLTR1Q9Y271 337 aa7.83□□□□□ -1.16
PRKDC-207ENST00000536483 IGIPA6NJ69 53 aa7.82□□□□□ -1.16
PRKDC-207ENST00000536483 C2orf66Q6UXQ4 117 aa7.82□□□□□ -1.16
PRKDC-207ENST00000536483 FAM19A3Q7Z5A8 133 aa7.82□□□□□ -1.16
PRKDC-207ENST00000536483 C5orf38Q86SI9 138 aa7.82□□□□□ -1.16
PRKDC-207ENST00000536483 LINC01561Q8N1V8 128 aa7.82□□□□□ -1.16
PRKDC-207ENST00000536483 LINC00526Q96FQ7 95 aa7.82□□□□□ -1.16
PRKDC-207ENST00000536483 AMELXQ99217 191 aa7.82□□□□□ -1.16
PRKDC-207ENST00000536483 TIMM17AQ99595 171 aa7.82□□□□□ -1.16
PRKDC-207ENST00000536483 RNF213Q63HN8 5207 aa7.81□□□□□ -1.16
PRKDC-207ENST00000536483 A0A087WZ39 114 aa7.81□□□□□ -1.16
PRKDC-207ENST00000536483 A0A096LNI7 61 aa7.81□□□□□ -1.16
PRKDC-207ENST00000536483 F8VRH5 84 aa7.81□□□□□ -1.16
PRKDC-207ENST00000536483 H0Y8G0 127 aa7.81□□□□□ -1.16
PRKDC-207ENST00000536483 MAJINQ3KP22 176 aa7.81□□□□□ -1.16
PRKDC-207ENST00000536483 LINC00242Q5T6M2 205 aa7.81□□□□□ -1.16
PRKDC-207ENST00000536483 UBE2D1P51668 147 aa7.8□□□□□ -1.16
PRKDC-207ENST00000536483 BOD1L2Q8IYS8 172 aa7.8□□□□□ -1.16
PRKDC-207ENST00000536483 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
PRKDC-207ENST00000536483 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
PRKDC-207ENST00000536483 STPG4Q8N801 248 aa7.79□□□□□ -1.16
PRKDC-207ENST00000536483 CAMK2N2Q96S95 79 aa7.79□□□□□ -1.16
PRKDC-207ENST00000536483 MRPL35Q9NZE8 188 aaKnown RBP7.79□□□□□ -1.16
PRKDC-207ENST00000536483 IGKV2-24A0A0C4DH68 120 aa7.78□□□□□ -1.16
PRKDC-207ENST00000536483 SPAG11BQ08648 103 aa7.78□□□□□ -1.16
PRKDC-207ENST00000536483 KIAA0087Q14695 138 aa7.78□□□□□ -1.16
PRKDC-207ENST00000536483 C7orf33Q8WU49 177 aa7.78□□□□□ -1.16
PRKDC-207ENST00000536483 HIGD1BQ9P298 99 aa7.78□□□□□ -1.16
PRKDC-207ENST00000536483 TLX1NBP0CAT3 122 aa7.77□□□□□ -1.17
PRKDC-207ENST00000536483 PMVKQ15126 192 aa7.77□□□□□ -1.17
PRKDC-207ENST00000536483 ORAOV1Q8WV07 137 aa7.77□□□□□ -1.17
PRKDC-207ENST00000536483 VCX2Q9H322 139 aa7.77□□□□□ -1.17
PRKDC-207ENST00000536483 CHTOPQ9Y3Y2 248 aaKnown RBP7.77□□□□□ -1.17
PRKDC-207ENST00000536483 SEC11AP67812 179 aa7.76□□□□□ -1.17
PRKDC-207ENST00000536483 ANKRD39Q53RE8 183 aa7.76□□□□□ -1.17
PRKDC-207ENST00000536483 NDUFA1O15239 70 aa7.75□□□□□ -1.17
PRKDC-207ENST00000536483 ZC2HC1BQ5TFG8 222 aa7.75□□□□□ -1.17
PRKDC-207ENST00000536483 HERVK_113P61574 105 aa7.74□□□□□ -1.17
PRKDC-207ENST00000536483 HSD52Q0P140 79 aa7.74□□□□□ -1.17
PRKDC-207ENST00000536483 LINC01600Q96MT4 127 aa7.74□□□□□ -1.17
PRKDC-207ENST00000536483 TRBV30A0A0K0K1B3 111 aa7.73□□□□□ -1.17
PRKDC-207ENST00000536483 A0A1B0GV90 55 aa7.73□□□□□ -1.17
PRKDC-207ENST00000536483 PRR3P79522 188 aaKnown RBP7.73□□□□□ -1.17
PRKDC-207ENST00000536483 GAGE2BQ13066 116 aa7.73□□□□□ -1.17
PRKDC-207ENST00000536483 TAL2Q16559 108 aa7.73□□□□□ -1.17
PRKDC-207ENST00000536483 C10orf25Q5T742 122 aa7.73□□□□□ -1.17
PRKDC-207ENST00000536483 CST9LQ9H4G1 147 aa7.73□□□□□ -1.17
PRKDC-207ENST00000536483 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
PRKDC-207ENST00000536483 E9PLD3 99 aa7.72□□□□□ -1.17
PRKDC-207ENST00000536483 NMUP48645 174 aa7.72□□□□□ -1.17
PRKDC-207ENST00000536483 HINT1P49773 126 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 224.2 ms