RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 FAM168BA1KXE4 195 aa8.19□□□□□ -1.1
PRKDC-206ENST00000536429 TLX1NBP0CAT3 122 aa8.19□□□□□ -1.1
PRKDC-206ENST00000536429 LINC00469Q8N7U9 141 aa8.19□□□□□ -1.1
PRKDC-206ENST00000536429 IGLV5-45A0A087WSX0 123 aa8.18□□□□□ -1.1
PRKDC-206ENST00000536429 TINCRA0A1B0GVN0 87 aa8.18□□□□□ -1.1
PRKDC-206ENST00000536429 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
PRKDC-206ENST00000536429 SEC11AP67812 179 aa8.18□□□□□ -1.1
PRKDC-206ENST00000536429 PMVKQ15126 192 aa8.18□□□□□ -1.1
PRKDC-206ENST00000536429 GAGE2EQ4V326 116 aa8.18□□□□□ -1.1
PRKDC-206ENST00000536429 GAGE2DQ9UEU5 116 aa8.18□□□□□ -1.1
PRKDC-206ENST00000536429 TRBV30A0A0K0K1B3 111 aa8.17□□□□□ -1.1
PRKDC-206ENST00000536429 LINC01549A6NIU2 74 aa8.17□□□□□ -1.1
PRKDC-206ENST00000536429 HBDP02042 147 aa8.17□□□□□ -1.1
PRKDC-206ENST00000536429 PRSS2P07478 247 aa8.17□□□□□ -1.1
PRKDC-206ENST00000536429 PDZD11Q5EBL8 140 aa8.17□□□□□ -1.1
PRKDC-206ENST00000536429 PHF5AQ7RTV0 110 aaKnown RBP8.17□□□□□ -1.1
PRKDC-206ENST00000536429 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
PRKDC-206ENST00000536429 Q8IZM0 81 aa8.17□□□□□ -1.1
PRKDC-206ENST00000536429 PACRGQ96M98 296 aaPredicted RBP8.17□□□□□ -1.1
PRKDC-206ENST00000536429 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
PRKDC-206ENST00000536429 C6orf226Q5I0X4 101 aa8.16□□□□□ -1.1
PRKDC-206ENST00000536429 OXTP01178 125 aa8.15□□□□□ -1.1
PRKDC-206ENST00000536429 NDUFA6P56556 154 aa8.15□□□□□ -1.1
PRKDC-206ENST00000536429 CKS1BP61024 79 aa8.15□□□□□ -1.1
PRKDC-206ENST00000536429 C9orf129Q5T035 196 aaKnown RBP8.15□□□□□ -1.1
PRKDC-206ENST00000536429 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
PRKDC-206ENST00000536429 FAM19A5Q7Z5A7 132 aaPredicted RBP8.14□□□□□ -1.11
PRKDC-206ENST00000536429 KRTAP11-1Q8IUC1 163 aa8.14□□□□□ -1.11
PRKDC-206ENST00000536429 TRGC2P03986 189 aa8.13□□□□□ -1.11
PRKDC-206ENST00000536429 IGLC3P0DOY3 106 aa8.13□□□□□ -1.11
PRKDC-206ENST00000536429 RAB5BP61020 215 aa8.13□□□□□ -1.11
PRKDC-206ENST00000536429 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
PRKDC-206ENST00000536429 F8VRH5 84 aa8.12□□□□□ -1.11
PRKDC-206ENST00000536429 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
PRKDC-206ENST00000536429 PSORS1C2Q9UIG4 136 aa8.12□□□□□ -1.11
PRKDC-206ENST00000536429 ATP5LO75964 103 aa8.11□□□□□ -1.11
PRKDC-206ENST00000536429 MT1HL1P0DM35 61 aa8.11□□□□□ -1.11
PRKDC-206ENST00000536429 CHCHD1Q96BP2 118 aaKnown RBP8.11□□□□□ -1.11
PRKDC-206ENST00000536429 XAGE1AQ9HD64 81 aa8.11□□□□□ -1.11
PRKDC-206ENST00000536429 C11orf86A6NJI1 115 aa8.1□□□□□ -1.11
PRKDC-206ENST00000536429 LINC00310P59036 64 aa8.1□□□□□ -1.11
PRKDC-206ENST00000536429 SRSF9Q13242 221 aaKnown RBP eCLIP8.1□□□□□ -1.11
PRKDC-206ENST00000536429 SERTAD4-AS1Q5TG53 156 aa8.1□□□□□ -1.11
PRKDC-206ENST00000536429 BAGE3Q86Y29 109 aa8.1□□□□□ -1.11
PRKDC-206ENST00000536429 FAM19A2Q8N3H0 131 aa8.1□□□□□ -1.11
PRKDC-206ENST00000536429 IGLV5-39A0A0G2JS06 123 aa8.09□□□□□ -1.11
PRKDC-206ENST00000536429 COLCA2A8K830 154 aa8.09□□□□□ -1.11
PRKDC-206ENST00000536429 H3BRM9 83 aa8.09□□□□□ -1.11
PRKDC-206ENST00000536429 M0QXV9 152 aa8.09□□□□□ -1.11
PRKDC-206ENST00000536429 CXCL5P42830 114 aa8.09□□□□□ -1.11
PRKDC-206ENST00000536429 SCO1O75880 301 aa8.08□□□□□ -1.12
PRKDC-206ENST00000536429 C1orf137Q5JT78 98 aa8.08□□□□□ -1.12
PRKDC-206ENST00000536429 SPINK6Q6UWN8 80 aa8.07□□□□□ -1.12
PRKDC-206ENST00000536429 IFI27L1Q96BM0 104 aa8.07□□□□□ -1.12
PRKDC-206ENST00000536429 NUPR1O60356 82 aa8.06□□□□□ -1.12
PRKDC-206ENST00000536429 SERF1AO75920 110 aa8.06□□□□□ -1.12
PRKDC-206ENST00000536429 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
PRKDC-206ENST00000536429 CHTOPQ9Y3Y2 248 aaKnown RBP8.06□□□□□ -1.12
PRKDC-206ENST00000536429 HSBP1O75506 76 aa8.05□□□□□ -1.12
PRKDC-206ENST00000536429 C22orf24Q9Y442 160 aa8.05□□□□□ -1.12
PRKDC-206ENST00000536429 TRAV12-1A0A0B4J245 112 aa8.04□□□□□ -1.12
PRKDC-206ENST00000536429 UBE2BP63146 152 aa8.04□□□□□ -1.12
PRKDC-206ENST00000536429 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
PRKDC-206ENST00000536429 ODF1Q14990 250 aa8.03□□□□□ -1.12
PRKDC-206ENST00000536429 LINC01600Q96MT4 127 aa8.03□□□□□ -1.12
PRKDC-206ENST00000536429 TMEM223A0PJW6 202 aa8.02□□□□□ -1.13
PRKDC-206ENST00000536429 ZNF625Q96I27 306 aaPredicted RBP8.02□□□□□ -1.13
PRKDC-206ENST00000536429 H0Y8G0 127 aa8.01□□□□□ -1.13
PRKDC-206ENST00000536429 PFN2P35080 140 aa8.01□□□□□ -1.13
PRKDC-206ENST00000536429 LEPROTL1O95214 131 aa8□□□□□ -1.13
PRKDC-206ENST00000536429 REG3GQ6UW15 175 aa8□□□□□ -1.13
PRKDC-206ENST00000536429 ERG28Q9UKR5 140 aa8□□□□□ -1.13
PRKDC-206ENST00000536429 FABP4P15090 132 aa7.99□□□□□ -1.13
PRKDC-206ENST00000536429 MRPL55Q7Z7F7 128 aaKnown RBP7.99□□□□□ -1.13
PRKDC-206ENST00000536429 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
PRKDC-206ENST00000536429 KRTAP10-8P60410 259 aa7.98□□□□□ -1.13
PRKDC-206ENST00000536429 LBHQ53QV2 105 aaPredicted RBP7.98□□□□□ -1.13
PRKDC-206ENST00000536429 Q8NDZ9 215 aa7.98□□□□□ -1.13
PRKDC-206ENST00000536429 TP73-AS1Q9UF72 201 aa7.98□□□□□ -1.13
PRKDC-206ENST00000536429 PLA2G2DQ9UNK4 145 aa7.98□□□□□ -1.13
PRKDC-206ENST00000536429 UBR4Q5T4S7 5183 aa7.97□□□□□ -1.13
PRKDC-206ENST00000536429 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
PRKDC-206ENST00000536429 LINC00167Q96N53 147 aa7.97□□□□□ -1.13
PRKDC-206ENST00000536429 PMCHL2Q9BQD1 86 aa7.97□□□□□ -1.13
PRKDC-206ENST00000536429 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
PRKDC-206ENST00000536429 IGLV5-37A0A075B6J1 123 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 H0Y9J4 135 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST1H2BKO60814 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST1H2BJP06899 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST1H2BOP23527 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST1H2BBP33778 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST1H2BDP58876 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST1H2BCP62807 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST2H2BEQ16778 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST1H2BHQ93079 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 DIRC1Q969H9 104 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST1H2BNQ99877 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 HIST1H2BMQ99879 126 aa7.96□□□□□ -1.14
PRKDC-206ENST00000536429 A0A0U1RRA0 63 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms