RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 C15orf56Q8N910 161 aa7.89□□□□□ -1.15
CHD4-203ENST00000535717 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
CHD4-203ENST00000535717 HBDP02042 147 aa7.88□□□□□ -1.15
CHD4-203ENST00000535717 UBE2D1P51668 147 aa7.88□□□□□ -1.15
CHD4-203ENST00000535717 PAPPA-AS1Q5QFB9 102 aa7.88□□□□□ -1.15
CHD4-203ENST00000535717 COX7A2LO14548 114 aa7.87□□□□□ -1.15
CHD4-203ENST00000535717 LINC00242Q5T6M2 205 aa7.87□□□□□ -1.15
CHD4-203ENST00000535717 CFAP161Q6P656 301 aa7.87□□□□□ -1.15
CHD4-203ENST00000535717 IGHV3OR16-9A0A0B4J2B5 98 aa7.86□□□□□ -1.15
CHD4-203ENST00000535717 hDV102S1A0JD36 115 aa7.86□□□□□ -1.15
CHD4-203ENST00000535717 J3QR89 54 aa7.86□□□□□ -1.15
CHD4-203ENST00000535717 COX6A2Q02221 97 aa7.86□□□□□ -1.15
CHD4-203ENST00000535717 C5orf38Q86SI9 138 aa7.86□□□□□ -1.15
CHD4-203ENST00000535717 BOD1L2Q8IYS8 172 aa7.86□□□□□ -1.15
CHD4-203ENST00000535717 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
CHD4-203ENST00000535717 IGHV1-58A0A0C4DH39 117 aa7.85□□□□□ -1.15
CHD4-203ENST00000535717 A0A1W2PPM0 123 aa7.85□□□□□ -1.15
CHD4-203ENST00000535717 A6NJY4 79 aa7.85□□□□□ -1.15
CHD4-203ENST00000535717 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.85□□□□□ -1.15
CHD4-203ENST00000535717 GCSHP23434 173 aa7.85□□□□□ -1.15
CHD4-203ENST00000535717 KRTAP10-1P60331 282 aa7.85□□□□□ -1.15
CHD4-203ENST00000535717 HIGD2BQ4VC39 106 aa7.85□□□□□ -1.15
CHD4-203ENST00000535717 HIGD1BQ9P298 99 aa7.85□□□□□ -1.15
CHD4-203ENST00000535717 SLPIP03973 132 aa7.84□□□□□ -1.15
CHD4-203ENST00000535717 MALP21145 153 aa7.84□□□□□ -1.15
CHD4-203ENST00000535717 PMVKQ15126 192 aa7.84□□□□□ -1.15
CHD4-203ENST00000535717 LINC01620Q4KN68 170 aa7.84□□□□□ -1.15
CHD4-203ENST00000535717 FAM19A3Q7Z5A8 133 aa7.84□□□□□ -1.15
CHD4-203ENST00000535717 SIGMAR1Q99720 223 aa7.84□□□□□ -1.15
CHD4-203ENST00000535717 A0A0J9YXV3 536 aa7.83□□□□□ -1.16
CHD4-203ENST00000535717 ATP5LO75964 103 aa7.83□□□□□ -1.16
CHD4-203ENST00000535717 FABP2P12104 132 aa7.83□□□□□ -1.16
CHD4-203ENST00000535717 CNBPP62633 177 aaKnown RBP7.83□□□□□ -1.16
CHD4-203ENST00000535717 A0A087WZ39 114 aa7.82□□□□□ -1.16
CHD4-203ENST00000535717 LINC00526Q96FQ7 95 aa7.82□□□□□ -1.16
CHD4-203ENST00000535717 SPCS1Q9Y6A9 102 aa7.82□□□□□ -1.16
CHD4-203ENST00000535717 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
CHD4-203ENST00000535717 APOBP04114 4563 aaKnown RBP7.81□□□□□ -1.16
CHD4-203ENST00000535717 IGHV3-64A0A075B6Q5 118 aa7.81□□□□□ -1.16
CHD4-203ENST00000535717 HERVK_113P63121 156 aa7.81□□□□□ -1.16
CHD4-203ENST00000535717 DNAH8Q96JB1 4490 aa7.81□□□□□ -1.16
CHD4-203ENST00000535717 TINCRA0A1B0GVN0 87 aa7.8□□□□□ -1.16
CHD4-203ENST00000535717 F8W1H4 67 aa7.8□□□□□ -1.16
CHD4-203ENST00000535717 ZNF561-AS1K7EIQ3 104 aa7.8□□□□□ -1.16
CHD4-203ENST00000535717 APOMO95445 188 aa7.8□□□□□ -1.16
CHD4-203ENST00000535717 C9orf163Q8N9P6 203 aa7.8□□□□□ -1.16
CHD4-203ENST00000535717 IFI27L1Q96BM0 104 aa7.8□□□□□ -1.16
CHD4-203ENST00000535717 GEMIN7Q9H840 131 aaKnown RBP7.8□□□□□ -1.16
CHD4-203ENST00000535717 CDKN2A-AS1Q9UH64 79 aa7.8□□□□□ -1.16
CHD4-203ENST00000535717 IGLV4-69A0A075B6H9 119 aa7.79□□□□□ -1.16
CHD4-203ENST00000535717 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.79□□□□□ -1.16
CHD4-203ENST00000535717 SPAG11BQ08648 103 aa7.79□□□□□ -1.16
CHD4-203ENST00000535717 TAL2Q16559 108 aa7.79□□□□□ -1.16
CHD4-203ENST00000535717 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
CHD4-203ENST00000535717 IGLV5-45A0A087WSX0 123 aa7.78□□□□□ -1.16
CHD4-203ENST00000535717 H3BUT2 72 aa7.78□□□□□ -1.16
CHD4-203ENST00000535717 FAM30AQ9NZY2 134 aa7.78□□□□□ -1.16
CHD4-203ENST00000535717 H0Y8G0 127 aa7.77□□□□□ -1.17
CHD4-203ENST00000535717 CDK2AP2O75956 126 aa7.77□□□□□ -1.17
CHD4-203ENST00000535717 SYCNQ0VAF6 134 aa7.77□□□□□ -1.17
CHD4-203ENST00000535717 SDIM1Q6ZPB5 146 aa7.77□□□□□ -1.17
CHD4-203ENST00000535717 C2orf48Q96LS8 159 aa7.77□□□□□ -1.17
CHD4-203ENST00000535717 HSPG2P98160 4391 aa7.77□□□□□ -1.17
CHD4-203ENST00000535717 RYR1P21817 5038 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 TRAV12-1A0A0B4J245 112 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 SMIM13P0DJ93 91 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 XGP55808 180 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 KIAA0087Q14695 138 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 Q6ZRU5 148 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 Q6ZSA8 131 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 CARD19Q96LW7 228 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 CAMK2N2Q96S95 79 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 SPANXB1Q9NS25 103 aaPredicted RBP7.76□□□□□ -1.17
CHD4-203ENST00000535717 TP73-AS1Q9UF72 201 aa7.76□□□□□ -1.17
CHD4-203ENST00000535717 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
CHD4-203ENST00000535717 E9PLD3 99 aa7.75□□□□□ -1.17
CHD4-203ENST00000535717 C11orf86A6NJI1 115 aa7.74□□□□□ -1.17
CHD4-203ENST00000535717 F8WDY8 70 aa7.74□□□□□ -1.17
CHD4-203ENST00000535717 TSPAN13O95857 204 aa7.74□□□□□ -1.17
CHD4-203ENST00000535717 ZNF22P17026 224 aaPredicted RBP7.74□□□□□ -1.17
CHD4-203ENST00000535717 HAMPP81172 84 aa7.74□□□□□ -1.17
CHD4-203ENST00000535717 A0A1B0GWB2 263 aa7.73□□□□□ -1.17
CHD4-203ENST00000535717 SPINK8P0C7L1 97 aa7.73□□□□□ -1.17
CHD4-203ENST00000535717 CKS1BP61024 79 aa7.73□□□□□ -1.17
CHD4-203ENST00000535717 C10orf25Q5T742 122 aa7.73□□□□□ -1.17
CHD4-203ENST00000535717 UNQ6190/PRO20217Q6UXQ8 127 aa7.73□□□□□ -1.17
CHD4-203ENST00000535717 MRPL35Q9NZE8 188 aaKnown RBP7.73□□□□□ -1.17
CHD4-203ENST00000535717 TOMM7Q9P0U1 55 aa7.73□□□□□ -1.17
CHD4-203ENST00000535717 HERC2O95714 4834 aa7.72□□□□□ -1.17
CHD4-203ENST00000535717 F8VRH5 84 aa7.72□□□□□ -1.17
CHD4-203ENST00000535717 PANO1I0J062 215 aa7.72□□□□□ -1.17
CHD4-203ENST00000535717 NDUFA1O15239 70 aa7.72□□□□□ -1.17
CHD4-203ENST00000535717 PRSS2P07478 247 aa7.72□□□□□ -1.17
CHD4-203ENST00000535717 ODF1Q14990 250 aa7.72□□□□□ -1.17
CHD4-203ENST00000535717 C2orf82Q6UX34 121 aa7.72□□□□□ -1.17
CHD4-203ENST00000535717 Q8IZM0 81 aa7.72□□□□□ -1.17
CHD4-203ENST00000535717 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.72□□□□□ -1.17
CHD4-203ENST00000535717 CHTF8P0CG12 524 aa7.71□□□□□ -1.18
CHD4-203ENST00000535717 C6orf226Q5I0X4 101 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms