RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 ATP5G1P05496 136 aa8.48□□□□□ -1.05
LINC01089-204ENST00000535643 ZNF415Q09FC8 603 aa8.48□□□□□ -1.05
LINC01089-204ENST00000535643 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
LINC01089-204ENST00000535643 C18orf65Q6ZTR6 163 aa8.48□□□□□ -1.05
LINC01089-204ENST00000535643 C19orf73Q9NVV2 129 aa8.48□□□□□ -1.05
LINC01089-204ENST00000535643 H7C2G1 150 aa8.47□□□□□ -1.05
LINC01089-204ENST00000535643 FAM104AQ969W3 186 aa8.47□□□□□ -1.05
LINC01089-204ENST00000535643 DUX3Q96PT4 197 aa8.47□□□□□ -1.05
LINC01089-204ENST00000535643 OPRPNQ99935 248 aaPredicted RBP8.47□□□□□ -1.05
LINC01089-204ENST00000535643 SPXQ9BT56 116 aa8.47□□□□□ -1.05
LINC01089-204ENST00000535643 UBE2D4Q9Y2X8 147 aa8.47□□□□□ -1.05
LINC01089-204ENST00000535643 FSIP2Q5CZC0 6907 aa8.47□□□□□ -1.05
LINC01089-204ENST00000535643 TEX49A0A1B0GTD5 131 aa8.46□□□□□ -1.06
LINC01089-204ENST00000535643 TMEM101Q96IK0 257 aa8.46□□□□□ -1.06
LINC01089-204ENST00000535643 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.06
LINC01089-204ENST00000535643 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
LINC01089-204ENST00000535643 IGKV3-7A0A075B6H7 116 aa8.45□□□□□ -1.06
LINC01089-204ENST00000535643 IGLV5-39A0A0G2JS06 123 aa8.45□□□□□ -1.06
LINC01089-204ENST00000535643 TRACP01848 142 aa8.45□□□□□ -1.06
LINC01089-204ENST00000535643 PRSS2P07478 247 aa8.45□□□□□ -1.06
LINC01089-204ENST00000535643 ELANEP08246 267 aa8.45□□□□□ -1.06
LINC01089-204ENST00000535643 FAM222AQ5U5X8 452 aa8.45□□□□□ -1.06
LINC01089-204ENST00000535643 KLK5Q9Y337 293 aaPredicted RBP8.45□□□□□ -1.06
LINC01089-204ENST00000535643 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
LINC01089-204ENST00000535643 B5MCH6 92 aa8.44□□□□□ -1.06
LINC01089-204ENST00000535643 COX7A2LO14548 114 aa8.44□□□□□ -1.06
LINC01089-204ENST00000535643 IGHV3-53P01767 116 aa8.44□□□□□ -1.06
LINC01089-204ENST00000535643 BLCAPP62952 87 aa8.44□□□□□ -1.06
LINC01089-204ENST00000535643 HERVK_113P63121 156 aa8.44□□□□□ -1.06
LINC01089-204ENST00000535643 SPINK13Q1W4C9 94 aa8.44□□□□□ -1.06
LINC01089-204ENST00000535643 OVOL2Q9BRP0 275 aa8.44□□□□□ -1.06
LINC01089-204ENST00000535643 A8MZ25 164 aa8.43□□□□□ -1.06
LINC01089-204ENST00000535643 HERV-K104P63124 156 aa8.43□□□□□ -1.06
LINC01089-204ENST00000535643 ADAMTSL4-AS1Q5T5F5 129 aa8.43□□□□□ -1.06
LINC01089-204ENST00000535643 SS18L2Q9UHA2 77 aa8.43□□□□□ -1.06
LINC01089-204ENST00000535643 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
LINC01089-204ENST00000535643 TRAV12-2A0A075B6T6 113 aa8.42□□□□□ -1.06
LINC01089-204ENST00000535643 TRAV8-3A0A0A6YYJ7 113 aa8.42□□□□□ -1.06
LINC01089-204ENST00000535643 CXCL5P42830 114 aa8.42□□□□□ -1.06
LINC01089-204ENST00000535643 DAND5Q8N907 189 aa8.42□□□□□ -1.06
LINC01089-204ENST00000535643 NACAE9PAV3 2078 aa8.41□□□□□ -1.06
LINC01089-204ENST00000535643 RS1O15537 224 aa8.41□□□□□ -1.06
LINC01089-204ENST00000535643 SDIM1Q6ZPB5 146 aa8.41□□□□□ -1.06
LINC01089-204ENST00000535643 LINC00643Q86TS7 51 aa8.41□□□□□ -1.06
LINC01089-204ENST00000535643 UBE2E2Q96LR5 201 aa8.41□□□□□ -1.06
LINC01089-204ENST00000535643 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
LINC01089-204ENST00000535643 CCDC179H3BU77 68 aa8.39□□□□□ -1.07
LINC01089-204ENST00000535643 CCL24O00175 119 aa8.39□□□□□ -1.07
LINC01089-204ENST00000535643 CLEC2BQ92478 149 aa8.39□□□□□ -1.07
LINC01089-204ENST00000535643 PEMTQ9UBM1 199 aa8.39□□□□□ -1.07
LINC01089-204ENST00000535643 PKHD1L1Q86WI1 4243 aa8.39□□□□□ -1.07
LINC01089-204ENST00000535643 TRBV10-1A0A0K0K1A3 114 aa8.38□□□□□ -1.07
LINC01089-204ENST00000535643 EDN2P20800 178 aa8.38□□□□□ -1.07
LINC01089-204ENST00000535643 INSP01308 110 aa8.37□□□□□ -1.07
LINC01089-204ENST00000535643 IGKV3-20P01619 116 aa8.37□□□□□ -1.07
LINC01089-204ENST00000535643 DGAT2L7PQ6IED9 249 aa8.37□□□□□ -1.07
LINC01089-204ENST00000535643 DEFB104AQ8WTQ1 72 aa8.37□□□□□ -1.07
LINC01089-204ENST00000535643 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
LINC01089-204ENST00000535643 TRAV13-2A0A0B4J235 113 aa8.36□□□□□ -1.07
LINC01089-204ENST00000535643 SYNJ2BPP57105 145 aa8.36□□□□□ -1.07
LINC01089-204ENST00000535643 MEIG1Q5JSS6 88 aa8.36□□□□□ -1.07
LINC01089-204ENST00000535643 C11orf72Q8NBR9 251 aa8.36□□□□□ -1.07
LINC01089-204ENST00000535643 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
LINC01089-204ENST00000535643 Q5VSD8 79 aa8.35□□□□□ -1.07
LINC01089-204ENST00000535643 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
LINC01089-204ENST00000535643 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.34□□□□□ -1.07
LINC01089-204ENST00000535643 IGHV3OR16-12A0A075B7B8 117 aa8.34□□□□□ -1.07
LINC01089-204ENST00000535643 IGKV2-29A2NJV5 120 aaPredicted RBP8.34□□□□□ -1.07
LINC01089-204ENST00000535643 SMIM1B2RUZ4 78 aa8.34□□□□□ -1.07
LINC01089-204ENST00000535643 RPL28P46779 137 aaKnown RBP8.34□□□□□ -1.07
LINC01089-204ENST00000535643 DEFB131AP59861 70 aa8.34□□□□□ -1.07
LINC01089-204ENST00000535643 DAZ2Q13117 558 aaKnown RBP8.34□□□□□ -1.07
LINC01089-204ENST00000535643 DAZ4Q86SG3 579 aaKnown RBP8.34□□□□□ -1.07
LINC01089-204ENST00000535643 Q9H8V8 135 aa8.34□□□□□ -1.07
LINC01089-204ENST00000535643 DAZ3Q9NR90 486 aaKnown RBP8.34□□□□□ -1.07
LINC01089-204ENST00000535643 UQCRQO14949 82 aa8.33□□□□□ -1.08
LINC01089-204ENST00000535643 DEFB136Q30KP8 78 aa8.33□□□□□ -1.08
LINC01089-204ENST00000535643 LINC00242Q5T6M2 205 aa8.33□□□□□ -1.08
LINC01089-204ENST00000535643 C5orf38Q86SI9 138 aa8.33□□□□□ -1.08
LINC01089-204ENST00000535643 LINC01587Q99440 93 aa8.33□□□□□ -1.08
LINC01089-204ENST00000535643 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
LINC01089-204ENST00000535643 KNCNA6PVL3 124 aa8.32□□□□□ -1.08
LINC01089-204ENST00000535643 RPL36AP83881 106 aaKnown RBP8.32□□□□□ -1.08
LINC01089-204ENST00000535643 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
LINC01089-204ENST00000535643 RPL36ALQ969Q0 106 aaKnown RBP8.32□□□□□ -1.08
LINC01089-204ENST00000535643 IGHV3-73A0A0B4J1V6 119 aa8.31□□□□□ -1.08
LINC01089-204ENST00000535643 FAM236AA0A1B0GUQ0 79 aa8.31□□□□□ -1.08
LINC01089-204ENST00000535643 FAM236BA0A1B0GV22 79 aa8.31□□□□□ -1.08
LINC01089-204ENST00000535643 H0YGX0 51 aa8.31□□□□□ -1.08
LINC01089-204ENST00000535643 BAALC-AS2P0C853 105 aa8.31□□□□□ -1.08
LINC01089-204ENST00000535643 RNASE13Q5GAN3 156 aaKnown RBP8.31□□□□□ -1.08
LINC01089-204ENST00000535643 Q6ZSN1 163 aa8.31□□□□□ -1.08
LINC01089-204ENST00000535643 LINC00526Q96FQ7 95 aa8.31□□□□□ -1.08
LINC01089-204ENST00000535643 F5H768 121 aa8.3□□□□□ -1.08
LINC01089-204ENST00000535643 K7EQD1 137 aa8.3□□□□□ -1.08
LINC01089-204ENST00000535643 CRPP02741 224 aa8.3□□□□□ -1.08
LINC01089-204ENST00000535643 MAP6D1Q9H9H5 199 aa8.3□□□□□ -1.08
LINC01089-204ENST00000535643 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
LINC01089-204ENST00000535643 ATOX1O00244 68 aa8.29□□□□□ -1.08
LINC01089-204ENST00000535643 NPC2P61916 151 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms