RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ZC2HC1BQ5TFG8 222 aa9.91□□□□□ -0.82
CLSTN3-204ENST00000535313 C2orf82Q6UX34 121 aa9.91□□□□□ -0.82
CLSTN3-204ENST00000535313 AMELXQ99217 191 aa9.91□□□□□ -0.82
CLSTN3-204ENST00000535313 IGLV7-43P04211 117 aa9.9□□□□□ -0.82
CLSTN3-204ENST00000535313 G0S2P27469 103 aa9.9□□□□□ -0.82
CLSTN3-204ENST00000535313 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
CLSTN3-204ENST00000535313 NDUFC2-KCTD14E9PQ53 114 aa9.89□□□□□ -0.83
CLSTN3-204ENST00000535313 FABP9Q0Z7S8 132 aa9.89□□□□□ -0.83
CLSTN3-204ENST00000535313 PAPPA-AS1Q5QFB9 102 aa9.89□□□□□ -0.83
CLSTN3-204ENST00000535313 LINC00173Q6ZV60 143 aa9.89□□□□□ -0.83
CLSTN3-204ENST00000535313 DIRC1Q969H9 104 aa9.89□□□□□ -0.83
CLSTN3-204ENST00000535313 TRAPPC1Q9Y5R8 145 aa9.89□□□□□ -0.83
CLSTN3-204ENST00000535313 CKS1BP61024 79 aa9.88□□□□□ -0.83
CLSTN3-204ENST00000535313 UBE2BP63146 152 aa9.88□□□□□ -0.83
CLSTN3-204ENST00000535313 SEC11AP67812 179 aa9.88□□□□□ -0.83
CLSTN3-204ENST00000535313 URB1-AS1Q96HZ7 61 aa9.88□□□□□ -0.83
CLSTN3-204ENST00000535313 TOMM7Q9P0U1 55 aa9.88□□□□□ -0.83
CLSTN3-204ENST00000535313 M0QXV9 152 aa9.87□□□□□ -0.83
CLSTN3-204ENST00000535313 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
CLSTN3-204ENST00000535313 LINC01546A6NGU7 62 aa9.86□□□□□ -0.83
CLSTN3-204ENST00000535313 HERVK_113P63121 156 aa9.86□□□□□ -0.83
CLSTN3-204ENST00000535313 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
CLSTN3-204ENST00000535313 C18orf32Q8TCD1 76 aa9.86□□□□□ -0.83
CLSTN3-204ENST00000535313 C9orf129Q5T035 196 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-204ENST00000535313 KRTAP11-1Q8IUC1 163 aa9.85□□□□□ -0.83
CLSTN3-204ENST00000535313 KRTAP7-1Q8IUC3 87 aa9.85□□□□□ -0.83
CLSTN3-204ENST00000535313 Q8IZM0 81 aa9.85□□□□□ -0.83
CLSTN3-204ENST00000535313 TIMM17AQ99595 171 aa9.85□□□□□ -0.83
CLSTN3-204ENST00000535313 GEMIN7Q9H840 131 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-204ENST00000535313 TOMM6Q96B49 74 aa9.84□□□□□ -0.83
CLSTN3-204ENST00000535313 H0Y9J4 135 aa9.83□□□□□ -0.84
CLSTN3-204ENST00000535313 TRGC2P03986 189 aa9.83□□□□□ -0.84
CLSTN3-204ENST00000535313 CDKN2A-AS1Q9UH64 79 aa9.83□□□□□ -0.84
CLSTN3-204ENST00000535313 SCGB3A1Q96QR1 104 aa9.82□□□□□ -0.84
CLSTN3-204ENST00000535313 A0A096LNJ9 63 aa9.81□□□□□ -0.84
CLSTN3-204ENST00000535313 ERASQ7Z444 233 aa9.81□□□□□ -0.84
CLSTN3-204ENST00000535313 LINC00469Q8N7U9 141 aa9.81□□□□□ -0.84
CLSTN3-204ENST00000535313 PRR26Q8N8Z3 221 aa9.81□□□□□ -0.84
CLSTN3-204ENST00000535313 F8VRH5 84 aa9.8□□□□□ -0.84
CLSTN3-204ENST00000535313 S100A1P23297 94 aa9.8□□□□□ -0.84
CLSTN3-204ENST00000535313 CXCL5P42830 114 aa9.8□□□□□ -0.84
CLSTN3-204ENST00000535313 LINC00310P59036 64 aa9.8□□□□□ -0.84
CLSTN3-204ENST00000535313 LINC01549A6NIU2 74 aa9.79□□□□□ -0.84
CLSTN3-204ENST00000535313 XAGE1AQ9HD64 81 aa9.79□□□□□ -0.84
CLSTN3-204ENST00000535313 LBHQ53QV2 105 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-204ENST00000535313 RNF213Q63HN8 5207 aa9.77□□□□□ -0.85
CLSTN3-204ENST00000535313 IGLV1-50A0A075B6I6 118 aa9.77□□□□□ -0.85
CLSTN3-204ENST00000535313 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
CLSTN3-204ENST00000535313 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
CLSTN3-204ENST00000535313 SMIM1B2RUZ4 78 aa9.76□□□□□ -0.85
CLSTN3-204ENST00000535313 PDZD11Q5EBL8 140 aa9.76□□□□□ -0.85
CLSTN3-204ENST00000535313 NUPR1O60356 82 aa9.75□□□□□ -0.85
CLSTN3-204ENST00000535313 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
CLSTN3-204ENST00000535313 COX7B2Q8TF08 81 aa9.75□□□□□ -0.85
CLSTN3-204ENST00000535313 ZNF861PO60384 105 aa9.74□□□□□ -0.85
CLSTN3-204ENST00000535313 KRTAP1-4P0C5Y4 121 aa9.74□□□□□ -0.85
CLSTN3-204ENST00000535313 PMCHL1Q16048 86 aa9.74□□□□□ -0.85
CLSTN3-204ENST00000535313 CST9LQ9H4G1 147 aa9.74□□□□□ -0.85
CLSTN3-204ENST00000535313 TP73-AS1Q9UF72 201 aa9.74□□□□□ -0.85
CLSTN3-204ENST00000535313 IGLV5-45A0A087WSX0 123 aa9.73□□□□□ -0.85
CLSTN3-204ENST00000535313 LINC00614P0C842 121 aa9.73□□□□□ -0.85
CLSTN3-204ENST00000535313 PMVKQ15126 192 aa9.73□□□□□ -0.85
CLSTN3-204ENST00000535313 MRPL55Q7Z7F7 128 aaKnown RBP9.73□□□□□ -0.85
CLSTN3-204ENST00000535313 RPL13AP40429 203 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-204ENST00000535313 HIST1H2BKO60814 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST1H2BJP06899 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 SPINK8P0C7L1 97 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST1H2BOP23527 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST1H2BBP33778 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST1H2BDP58876 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST1H2BCP62807 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST2H2BEQ16778 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST1H2BHQ93079 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST1H2BNQ99877 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 HIST1H2BMQ99879 126 aa9.71□□□□□ -0.86
CLSTN3-204ENST00000535313 H3BRM9 83 aa9.7□□□□□ -0.86
CLSTN3-204ENST00000535313 SERF1AO75920 110 aa9.69□□□□□ -0.86
CLSTN3-204ENST00000535313 RAB5BP61020 215 aa9.69□□□□□ -0.86
CLSTN3-204ENST00000535313 CHCHD1Q96BP2 118 aaKnown RBP9.69□□□□□ -0.86
CLSTN3-204ENST00000535313 BCE1O60756 84 aa9.68□□□□□ -0.86
CLSTN3-204ENST00000535313 HBDP02042 147 aa9.68□□□□□ -0.86
CLSTN3-204ENST00000535313 RPL28P46779 137 aaKnown RBP9.68□□□□□ -0.86
CLSTN3-204ENST00000535313 ATP5LO75964 103 aa9.67□□□□□ -0.86
CLSTN3-204ENST00000535313 NDUFA6P56556 154 aa9.67□□□□□ -0.86
CLSTN3-204ENST00000535313 FAM19A2Q8N3H0 131 aa9.67□□□□□ -0.86
CLSTN3-204ENST00000535313 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
CLSTN3-204ENST00000535313 LPAP08519 4548 aa9.66□□□□□ -0.86
CLSTN3-204ENST00000535313 RPL37AP8A6NKH3 93 aa9.66□□□□□ -0.86
CLSTN3-204ENST00000535313 BAGE3Q86Y29 109 aa9.66□□□□□ -0.86
CLSTN3-204ENST00000535313 NKAPP1Q8N9T2 125 aa9.66□□□□□ -0.86
CLSTN3-204ENST00000535313 GAGE10A6NGK3 116 aa9.65□□□□□ -0.86
CLSTN3-204ENST00000535313 IGLC3P0DOY3 106 aa9.65□□□□□ -0.86
CLSTN3-204ENST00000535313 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
CLSTN3-204ENST00000535313 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
CLSTN3-204ENST00000535313 HSBP1O75506 76 aa9.62□□□□□ -0.87
CLSTN3-204ENST00000535313 PFN2P35080 140 aa9.62□□□□□ -0.87
CLSTN3-204ENST00000535313 ZNF22P17026 224 aaPredicted RBP9.61□□□□□ -0.87
CLSTN3-204ENST00000535313 PRR4Q16378 134 aa9.61□□□□□ -0.87
CLSTN3-204ENST00000535313 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms