RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 SLC25A21Q9BQT8 299 aaPredicted RBP3.93□□□□□ -1.78
CPSF7-214ENST00000535222 MAP1LC3CQ9BXW4 147 aa3.93□□□□□ -1.78
CPSF7-214ENST00000535222 EPDR1Q9UM22 224 aa3.93□□□□□ -1.78
CPSF7-214ENST00000535222 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
CPSF7-214ENST00000535222 CSDC2Q9Y534 153 aaKnown RBP3.93□□□□□ -1.78
CPSF7-214ENST00000535222 J3QR89 54 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 COX7A2LO14548 114 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 MALP21145 153 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 GAGE2EQ4V326 116 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 C10orf25Q5T742 122 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 AMMECR1LQ6DCA0 310 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 SMIM20Q8N5G0 67 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 TMEM252Q8N6L7 170 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 TMEM18Q96B42 140 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 YPEL4Q96NS1 127 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 RPS10P5Q9NQ39 176 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 KCNIP2Q9NS61 270 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 C6orf48Q9UBA6 75 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 GAGE2DQ9UEU5 116 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 TP73-AS1Q9UF72 201 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 SS18L2Q9UHA2 77 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 HSPB8Q9UJY1 196 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 ARL2-SNX15V9GYD0 113 aa3.92□□□□□ -1.78
CPSF7-214ENST00000535222 HIST1H2BKO60814 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 SH2D1AO60880 128 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST1H2BJP06899 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 CXCL1P09341 107 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST1H2BOP23527 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST1H2BBP33778 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST1H2BDP58876 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST1H2BCP62807 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST2H2BEQ16778 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.91□□□□□ -1.78
CPSF7-214ENST00000535222 GTF2H5Q6ZYL4 71 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST1H2BHQ93079 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST1H2BNQ99877 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 HIST1H2BMQ99879 126 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 TMEM126AQ9H061 195 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 ERG28Q9UKR5 140 aa3.91□□□□□ -1.78
CPSF7-214ENST00000535222 BORCS7-ASMTA0A0B4J1R7 106 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 KANTRA0A1W2PQU2 76 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 C7orf77A4D0Y5 90 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 NDUFA1O15239 70 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 NCR2O95944 276 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 OR5AL1P0C617 328 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 NTF3P20783 257 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 ATP6V0CP27449 155 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 GNG4P50150 75 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 LINC00310P59036 64 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 RPL24P83731 157 aaKnown RBP3.9□□□□□ -1.79
CPSF7-214ENST00000535222 SPAG11BQ08648 103 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 SUMO4Q6EEV6 95 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 RASL11AQ6T310 242 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 KCNRGQ8N5I3 272 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 CYTL1Q9NRR1 136 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 CDC42SE2Q9NRR3 84 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 UQCR10Q9UDW1 63 aa3.9□□□□□ -1.79
CPSF7-214ENST00000535222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.89□□□□□ -1.79
CPSF7-214ENST00000535222 IGKV2-29A2NJV5 120 aaPredicted RBP3.89□□□□□ -1.79
CPSF7-214ENST00000535222 NAP1L6A6NFF2 107 aa3.89□□□□□ -1.79
CPSF7-214ENST00000535222 KRTAP10-10P60014 251 aa3.89□□□□□ -1.79
CPSF7-214ENST00000535222 UNQ6190/PRO20217Q6UXQ8 127 aa3.89□□□□□ -1.79
CPSF7-214ENST00000535222 TEX43Q6ZNM6 134 aa3.89□□□□□ -1.79
CPSF7-214ENST00000535222 ERASQ7Z444 233 aa3.89□□□□□ -1.79
CPSF7-214ENST00000535222 OR13C6PQ8NH95 151 aa3.89□□□□□ -1.79
CPSF7-214ENST00000535222 OCC1Q8TAD7 63 aa3.89□□□□□ -1.79
CPSF7-214ENST00000535222 WDR61Q9GZS3 305 aaKnown RBP3.89□□□□□ -1.79
CPSF7-214ENST00000535222 TNFSF18Q9UNG2 199 aa3.89□□□□□ -1.79
CPSF7-214ENST00000535222 LAMTOR2Q9Y2Q5 125 aa3.89□□□□□ -1.79
CPSF7-214ENST00000535222 NDUFC2-KCTD14E9PQ53 114 aa3.88□□□□□ -1.79
CPSF7-214ENST00000535222 SLC25A20O43772 301 aa3.88□□□□□ -1.79
CPSF7-214ENST00000535222 PMCHP20382 165 aa3.88□□□□□ -1.79
CPSF7-214ENST00000535222 HSD52Q0P140 79 aa3.88□□□□□ -1.79
CPSF7-214ENST00000535222 SMAGPQ0VAQ4 97 aa3.88□□□□□ -1.79
CPSF7-214ENST00000535222 BATFQ16520 125 aa3.88□□□□□ -1.79
CPSF7-214ENST00000535222 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
CPSF7-214ENST00000535222 PLEKHB2Q96CS7 222 aa3.88□□□□□ -1.79
CPSF7-214ENST00000535222 BTF3L4Q96K17 158 aa3.88□□□□□ -1.79
CPSF7-214ENST00000535222 TMSB15BA0A087X1C1 80 aa3.87□□□□□ -1.79
CPSF7-214ENST00000535222 C17orf112F2Z3M2 114 aa3.87□□□□□ -1.79
CPSF7-214ENST00000535222 IL15RAQ13261 267 aa3.87□□□□□ -1.79
CPSF7-214ENST00000535222 SPANXN1Q5VSR9 72 aa3.87□□□□□ -1.79
CPSF7-214ENST00000535222 MRPL55Q7Z7F7 128 aaKnown RBP3.87□□□□□ -1.79
CPSF7-214ENST00000535222 Q86TA4 180 aa3.87□□□□□ -1.79
CPSF7-214ENST00000535222 Q8NBF4 154 aa3.87□□□□□ -1.79
CPSF7-214ENST00000535222 AP1S3Q96PC3 154 aa3.87□□□□□ -1.79
CPSF7-214ENST00000535222 SPANXB1Q9NS25 103 aaPredicted RBP3.87□□□□□ -1.79
CPSF7-214ENST00000535222 NAT8BQ9UHF3 227 aa3.87□□□□□ -1.79
CPSF7-214ENST00000535222 TRBV30A0A0K0K1B3 111 aa3.86□□□□□ -1.79
CPSF7-214ENST00000535222 TRGC1P0CF51 173 aa3.86□□□□□ -1.79
CPSF7-214ENST00000535222 BTCP35070 178 aa3.86□□□□□ -1.79
CPSF7-214ENST00000535222 FAUP35544 74 aaKnown RBP3.86□□□□□ -1.79
CPSF7-214ENST00000535222 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
CPSF7-214ENST00000535222 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
CPSF7-214ENST00000535222 VAMP8Q9BV40 100 aa3.86□□□□□ -1.79
CPSF7-214ENST00000535222 TMEM242Q9NWH2 141 aa3.86□□□□□ -1.79
CPSF7-214ENST00000535222 LSM5Q9Y4Y9 91 aaKnown RBP3.86□□□□□ -1.79
CPSF7-214ENST00000535222 FXYD6-FXYD2A0A087WZ82 144 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms