RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 SRRM2Q9UQ35 2752 aaKnown RBP6.43□□□□□ -1.38
CSDE1-217ENST00000534699 PDZD11Q5EBL8 140 aa6.43□□□□□ -1.38
CSDE1-217ENST00000534699 LINC00173Q6ZV60 143 aa6.43□□□□□ -1.38
CSDE1-217ENST00000534699 DIRC1Q969H9 104 aa6.43□□□□□ -1.38
CSDE1-217ENST00000534699 MRPL18Q9H0U6 180 aaKnown RBP6.43□□□□□ -1.38
CSDE1-217ENST00000534699 C6orf48Q9UBA6 75 aa6.43□□□□□ -1.38
CSDE1-217ENST00000534699 C5orf52A6NGY3 159 aa6.43□□□□□ -1.38
CSDE1-217ENST00000534699 LINC00526Q96FQ7 95 aa6.43□□□□□ -1.38
CSDE1-217ENST00000534699 IGLV5-45A0A087WSX0 123 aa6.42□□□□□ -1.38
CSDE1-217ENST00000534699 TINCRA0A1B0GVN0 87 aa6.42□□□□□ -1.38
CSDE1-217ENST00000534699 A0A1W2PNN7 141 aa6.42□□□□□ -1.38
CSDE1-217ENST00000534699 LBHQ53QV2 105 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-217ENST00000534699 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
CSDE1-217ENST00000534699 LOC389332A0A1B0GUA5 103 aa6.42□□□□□ -1.38
CSDE1-217ENST00000534699 SFTA2Q6UW10 78 aa6.42□□□□□ -1.38
CSDE1-217ENST00000534699 S100A6P06703 90 aa6.41□□□□□ -1.38
CSDE1-217ENST00000534699 OPRPNQ99935 248 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-217ENST00000534699 ALKBH7Q9BT30 221 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-217ENST00000534699 GEMIN7Q9H840 131 aaKnown RBP6.41□□□□□ -1.38
CSDE1-217ENST00000534699 CKS1BP61024 79 aa6.41□□□□□ -1.38
CSDE1-217ENST00000534699 UNQ6190/PRO20217Q6UXQ8 127 aa6.41□□□□□ -1.38
CSDE1-217ENST00000534699 PSORS1C2Q9UIG4 136 aa6.41□□□□□ -1.38
CSDE1-217ENST00000534699 SNRPEP62304 92 aaKnown RBP6.4□□□□□ -1.38
CSDE1-217ENST00000534699 IGLV1-50A0A075B6I6 118 aa6.4□□□□□ -1.39
CSDE1-217ENST00000534699 IGLV7-43P04211 117 aa6.4□□□□□ -1.39
CSDE1-217ENST00000534699 C6orf226Q5I0X4 101 aa6.4□□□□□ -1.39
CSDE1-217ENST00000534699 SCGB3A1Q96QR1 104 aa6.4□□□□□ -1.39
CSDE1-217ENST00000534699 F8VRH5 84 aa6.39□□□□□ -1.39
CSDE1-217ENST00000534699 RPS10P5Q9NQ39 176 aa6.39□□□□□ -1.39
CSDE1-217ENST00000534699 H3BRM9 83 aa6.38□□□□□ -1.39
CSDE1-217ENST00000534699 PMVKQ15126 192 aa6.38□□□□□ -1.39
CSDE1-217ENST00000534699 C10orf25Q5T742 122 aa6.38□□□□□ -1.39
CSDE1-217ENST00000534699 FA2HQ7L5A8 372 aa6.38□□□□□ -1.39
CSDE1-217ENST00000534699 IGLV5-37A0A075B6J1 123 aa6.37□□□□□ -1.39
CSDE1-217ENST00000534699 LINC00587B1AMM8 73 aa6.37□□□□□ -1.39
CSDE1-217ENST00000534699 H0Y9J4 135 aa6.37□□□□□ -1.39
CSDE1-217ENST00000534699 RPL13AP40429 203 aaKnown RBP6.37□□□□□ -1.39
CSDE1-217ENST00000534699 C1orf137Q5JT78 98 aa6.37□□□□□ -1.39
CSDE1-217ENST00000534699 FABP9Q0Z7S8 132 aa6.36□□□□□ -1.39
CSDE1-217ENST00000534699 PHF5AQ7RTV0 110 aaKnown RBP6.36□□□□□ -1.39
CSDE1-217ENST00000534699 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
CSDE1-217ENST00000534699 M0QXV9 152 aa6.36□□□□□ -1.39
CSDE1-217ENST00000534699 CST9LQ9H4G1 147 aa6.36□□□□□ -1.39
CSDE1-217ENST00000534699 YPEL4Q96NS1 127 aa6.35□□□□□ -1.39
CSDE1-217ENST00000534699 ATP5LO75964 103 aa6.35□□□□□ -1.39
CSDE1-217ENST00000534699 IGLC3P0DOY3 106 aa6.35□□□□□ -1.39
CSDE1-217ENST00000534699 COX7B2Q8TF08 81 aa6.35□□□□□ -1.39
CSDE1-217ENST00000534699 CDKN2A-AS1Q9UH64 79 aa6.35□□□□□ -1.39
CSDE1-217ENST00000534699 COX17Q14061 63 aa6.34□□□□□ -1.39
CSDE1-217ENST00000534699 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.39
CSDE1-217ENST00000534699 UBE2BP63146 152 aa6.33□□□□□ -1.4
CSDE1-217ENST00000534699 GAGE2EQ4V326 116 aa6.33□□□□□ -1.4
CSDE1-217ENST00000534699 C9orf129Q5T035 196 aaKnown RBP6.33□□□□□ -1.4
CSDE1-217ENST00000534699 GAGE2DQ9UEU5 116 aa6.33□□□□□ -1.4
CSDE1-217ENST00000534699 FAM19A5Q7Z5A7 132 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-217ENST00000534699 TOMM7Q9P0U1 55 aa6.32□□□□□ -1.4
CSDE1-217ENST00000534699 KIAA1644Q3SXP7 199 aa6.32□□□□□ -1.4
CSDE1-217ENST00000534699 C2orf82Q6UX34 121 aa6.32□□□□□ -1.4
CSDE1-217ENST00000534699 IGLV5-39A0A0G2JS06 123 aa6.32□□□□□ -1.4
CSDE1-217ENST00000534699 ZNF861PO60384 105 aa6.32□□□□□ -1.4
CSDE1-217ENST00000534699 HBDP02042 147 aa6.32□□□□□ -1.4
CSDE1-217ENST00000534699 LINC00614P0C842 121 aa6.32□□□□□ -1.4
CSDE1-217ENST00000534699 TRAPPC1Q9Y5R8 145 aa6.32□□□□□ -1.4
CSDE1-217ENST00000534699 RPL28P46779 137 aaKnown RBP6.31□□□□□ -1.4
CSDE1-217ENST00000534699 CHCHD1Q96BP2 118 aaKnown RBP6.31□□□□□ -1.4
CSDE1-217ENST00000534699 C22orf24Q9Y442 160 aa6.31□□□□□ -1.4
CSDE1-217ENST00000534699 S100A2P29034 98 aa6.31□□□□□ -1.4
CSDE1-217ENST00000534699 KRTAP7-1Q8IUC3 87 aa6.31□□□□□ -1.4
CSDE1-217ENST00000534699 MRPL55Q7Z7F7 128 aaKnown RBP6.3□□□□□ -1.4
CSDE1-217ENST00000534699 BCE1O60756 84 aa6.3□□□□□ -1.4
CSDE1-217ENST00000534699 C18orf32Q8TCD1 76 aa6.3□□□□□ -1.4
CSDE1-217ENST00000534699 TRAV12-1A0A0B4J245 112 aa6.29□□□□□ -1.4
CSDE1-217ENST00000534699 FAM168BA1KXE4 195 aa6.29□□□□□ -1.4
CSDE1-217ENST00000534699 RPL24P83731 157 aaKnown RBP6.29□□□□□ -1.4
CSDE1-217ENST00000534699 ZC2HC1BQ5TFG8 222 aa6.29□□□□□ -1.4
CSDE1-217ENST00000534699 NDUFA6P56556 154 aa6.28□□□□□ -1.4
CSDE1-217ENST00000534699 HERC1Q15751 4861 aa6.27□□□□□ -1.41
CSDE1-217ENST00000534699 FAM229BQ4G0N7 80 aa6.27□□□□□ -1.41
CSDE1-217ENST00000534699 PYY3Q5JQD4 70 aa6.27□□□□□ -1.41
CSDE1-217ENST00000534699 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 NKAPP1Q8N9T2 125 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST1H2BKO60814 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST1H2BJP06899 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 ZNF22P17026 224 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST1H2BOP23527 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST1H2BBP33778 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST1H2BDP58876 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST1H2BCP62807 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST2H2BEQ16778 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST3H2BBQ8N257 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST1H2BHQ93079 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST1H2BNQ99877 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 HIST1H2BMQ99879 126 aa6.26□□□□□ -1.41
CSDE1-217ENST00000534699 A0A096LNJ9 63 aa6.25□□□□□ -1.41
CSDE1-217ENST00000534699 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
CSDE1-217ENST00000534699 SPINK8P0C7L1 97 aa6.24□□□□□ -1.41
CSDE1-217ENST00000534699 HERV-K104P63124 156 aa6.24□□□□□ -1.41
CSDE1-217ENST00000534699 URB1-AS1Q96HZ7 61 aa6.24□□□□□ -1.41
CSDE1-217ENST00000534699 ERG28Q9UKR5 140 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms