RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	PKD1L2	Q7Z442	2459 aa		11.16	□□□□□ -0.62
NCAPD3-213	ENST00000534532	C3orf22	Q8N5N4	141 aa		11.16	□□□□□ -0.62
NCAPD3-213	ENST00000534532		K7ERS5	55 aa		11.16	□□□□□ -0.62
NCAPD3-213	ENST00000534532	ATG2A	Q2TAZ0	1938 aa		11.15	□□□□□ -0.62
NCAPD3-213	ENST00000534532	C20orf197	Q8N268	126 aa		11.14	□□□□□ -0.63
NCAPD3-213	ENST00000534532	EP400	Q96L91	3159 aa		11.14	□□□□□ -0.63
NCAPD3-213	ENST00000534532	MRPL55	Q7Z7F7	128 aa	Known RBP	11.13	□□□□□ -0.63
NCAPD3-213	ENST00000534532		Q6JHZ5	121 aa		11.13	□□□□□ -0.63
NCAPD3-213	ENST00000534532	POLQ	O75417	2590 aa		11.13	□□□□□ -0.63
NCAPD3-213	ENST00000534532	YPEL4	Q96NS1	127 aa		11.13	□□□□□ -0.63
NCAPD3-213	ENST00000534532		Q6ZSN1	163 aa		11.12	□□□□□ -0.63
NCAPD3-213	ENST00000534532	LINC01561	Q8N1V8	128 aa		11.12	□□□□□ -0.63
NCAPD3-213	ENST00000534532	CELA1	Q9UNI1	258 aa		11.12	□□□□□ -0.63
NCAPD3-213	ENST00000534532	AMELX	Q99217	191 aa		11.11	□□□□□ -0.63
NCAPD3-213	ENST00000534532		Q8N9L7	120 aa		11.11	□□□□□ -0.63
NCAPD3-213	ENST00000534532	PRY	O14603	147 aa		11.1	□□□□□ -0.63
NCAPD3-213	ENST00000534532		J3KT08	172 aa		11.1	□□□□□ -0.63
NCAPD3-213	ENST00000534532	NTM-AS1	Q6ZSK4	140 aa		11.1	□□□□□ -0.63
NCAPD3-213	ENST00000534532	NDUFC2	O95298	119 aa		11.09	□□□□□ -0.63
NCAPD3-213	ENST00000534532	FAM19A3	Q7Z5A8	133 aa		11.09	□□□□□ -0.63
NCAPD3-213	ENST00000534532	EPG5	Q9HCE0	2579 aa		11.08	□□□□□ -0.64
NCAPD3-213	ENST00000534532		Q9BRP9	147 aa		11.07	□□□□□ -0.64
NCAPD3-213	ENST00000534532	CPAMD8	Q8IZJ3	1885 aa		11.07	□□□□□ -0.64
NCAPD3-213	ENST00000534532	SBSPON	Q8IVN8	264 aa		11.07	□□□□□ -0.64
NCAPD3-213	ENST00000534532		Q6ZRU5	148 aa		11.07	□□□□□ -0.64
NCAPD3-213	ENST00000534532	PRR15L	Q9BU68	103 aa		11.07	□□□□□ -0.64
NCAPD3-213	ENST00000534532		Q8N814	137 aa		11.06	□□□□□ -0.64
NCAPD3-213	ENST00000534532	SERP1	Q9Y6X1	66 aa		11.06	□□□□□ -0.64
NCAPD3-213	ENST00000534532	SPTSSB	Q8NFR3	76 aa		11.05	□□□□□ -0.64
NCAPD3-213	ENST00000534532	PRR3	P79522	188 aa	Known RBP	11.05	□□□□□ -0.64
NCAPD3-213	ENST00000534532	C2orf91	Q6ZV80	131 aa		11.05	□□□□□ -0.64
NCAPD3-213	ENST00000534532	C11orf72	Q8NBR9	251 aa		11.05	□□□□□ -0.64
NCAPD3-213	ENST00000534532	ESRG	Q1W209	222 aa		11.04	□□□□□ -0.64
NCAPD3-213	ENST00000534532		H3BNG1	76 aa		11.04	□□□□□ -0.64
NCAPD3-213	ENST00000534532		Q6ZVQ6	151 aa		11.04	□□□□□ -0.64
NCAPD3-213	ENST00000534532	LIMD2	Q9BT23	127 aa		11.04	□□□□□ -0.64
NCAPD3-213	ENST00000534532	UQCRQ	O14949	82 aa		11.04	□□□□□ -0.64
NCAPD3-213	ENST00000534532	WWC2-AS2	Q96NR7	200 aa		11.03	□□□□□ -0.64
NCAPD3-213	ENST00000534532	ACAN	P16112	2415 aa		11.01	□□□□□ -0.65
NCAPD3-213	ENST00000534532	IGHV6-1	A0A0B4J1U7	121 aa		11.01	□□□□□ -0.65
NCAPD3-213	ENST00000534532	MT-ATP8	P03928	68 aa		11.01	□□□□□ -0.65
NCAPD3-213	ENST00000534532	FAM229A	H3BQW9	127 aa		11	□□□□□ -0.65
NCAPD3-213	ENST00000534532	FAM236D	A0A1B0GTK5	79 aa		11	□□□□□ -0.65
NCAPD3-213	ENST00000534532	FAM236C	P0DP71	79 aa		11	□□□□□ -0.65
NCAPD3-213	ENST00000534532	TET2	Q6N021	2002 aa	Predicted RBP	11	□□□□□ -0.65
NCAPD3-213	ENST00000534532	F8	P00451	2351 aa		11	□□□□□ -0.65
NCAPD3-213	ENST00000534532	C22orf24	Q9Y442	160 aa		10.99	□□□□□ -0.65
NCAPD3-213	ENST00000534532	AGRN	O00468	2067 aa		10.99	□□□□□ -0.65
NCAPD3-213	ENST00000534532	COL4A2	P08572	1712 aa		10.99	□□□□□ -0.65
NCAPD3-213	ENST00000534532	NDUFC1	O43677	76 aa		10.99	□□□□□ -0.65
NCAPD3-213	ENST00000534532	LINC00337	Q8N6G1	96 aa		10.98	□□□□□ -0.65
NCAPD3-213	ENST00000534532	URB1-AS1	Q96HZ7	61 aa		10.98	□□□□□ -0.65
NCAPD3-213	ENST00000534532	IMUP	Q9GZP8	106 aa		10.98	□□□□□ -0.65
NCAPD3-213	ENST00000534532	TSPEAR-AS2	P59090	65 aa		10.97	□□□□□ -0.65
NCAPD3-213	ENST00000534532		X6R8D5	127 aa		10.97	□□□□□ -0.65
NCAPD3-213	ENST00000534532	PRLH	P81277	87 aa		10.97	□□□□□ -0.65
NCAPD3-213	ENST00000534532	KIF25-AS1	Q9Y6Z4	181 aa		10.96	□□□□□ -0.65
NCAPD3-213	ENST00000534532	FLNB	O75369	2602 aa	Known RBP	10.96	□□□□□ -0.66
NCAPD3-213	ENST00000534532	EML5	Q05BV3	1969 aa		10.96	□□□□□ -0.66
NCAPD3-213	ENST00000534532		A0A087WSZ3	146 aa		10.96	□□□□□ -0.66
NCAPD3-213	ENST00000534532	ADAMTSL4-AS1	Q5T5F5	129 aa		10.96	□□□□□ -0.66
NCAPD3-213	ENST00000534532	NBDY	A0A0U1RRE5	68 aa		10.95	□□□□□ -0.66
NCAPD3-213	ENST00000534532	SMCR5	Q8TEV8	140 aa		10.95	□□□□□ -0.66
NCAPD3-213	ENST00000534532	ANKRD17	O75179	2603 aa	Known RBP	10.95	□□□□□ -0.66
NCAPD3-213	ENST00000534532	SERP2	Q8N6R1	65 aa		10.94	□□□□□ -0.66
NCAPD3-213	ENST00000534532	FAM30A	Q9NZY2	134 aa		10.94	□□□□□ -0.66
NCAPD3-213	ENST00000534532		V9GYY9	64 aa		10.94	□□□□□ -0.66
NCAPD3-213	ENST00000534532	ATP5E	P56381	51 aa	Predicted RBP	10.94	□□□□□ -0.66
NCAPD3-213	ENST00000534532	LINC00315	P59091	139 aa		10.93	□□□□□ -0.66
NCAPD3-213	ENST00000534532	C16orf90	A8MZG2	172 aa		10.93	□□□□□ -0.66
NCAPD3-213	ENST00000534532		A0A087WYN8	130 aa		10.93	□□□□□ -0.66
NCAPD3-213	ENST00000534532	MPLKIP	Q8TAP9	179 aa		10.91	□□□□□ -0.66
NCAPD3-213	ENST00000534532	FAM19A4	Q96LR4	140 aa		10.91	□□□□□ -0.66
NCAPD3-213	ENST00000534532	SNURF	Q9Y675	71 aa		10.9	□□□□□ -0.66
NCAPD3-213	ENST00000534532	LINC00310	P59036	64 aa		10.9	□□□□□ -0.66
NCAPD3-213	ENST00000534532	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.9	□□□□□ -0.67
NCAPD3-213	ENST00000534532	PRR4	Q16378	134 aa		10.9	□□□□□ -0.67
NCAPD3-213	ENST00000534532	LINC00575	Q6W349	94 aa		10.9	□□□□□ -0.67
NCAPD3-213	ENST00000534532	RTL8C	O15255	209 aa		10.89	□□□□□ -0.67
NCAPD3-213	ENST00000534532	LINC01547	P58512	204 aa	Predicted RBP	10.88	□□□□□ -0.67
NCAPD3-213	ENST00000534532		Q8NAQ8	132 aa		10.88	□□□□□ -0.67
NCAPD3-213	ENST00000534532	XG	P55808	180 aa		10.88	□□□□□ -0.67
NCAPD3-213	ENST00000534532	SVIP	Q8NHG7	77 aa		10.88	□□□□□ -0.67
NCAPD3-213	ENST00000534532	LINC00208	Q96KT6	92 aa		10.88	□□□□□ -0.67
NCAPD3-213	ENST00000534532		A0A096LNJ9	63 aa		10.87	□□□□□ -0.67
NCAPD3-213	ENST00000534532	BRK1	Q8WUW1	75 aa		10.87	□□□□□ -0.67
NCAPD3-213	ENST00000534532	RETNLB	Q9BQ08	111 aa		10.86	□□□□□ -0.67
NCAPD3-213	ENST00000534532	LINC00167	Q96N53	147 aa		10.86	□□□□□ -0.67
NCAPD3-213	ENST00000534532	LINC00588	Q9Y4M8	146 aa		10.85	□□□□□ -0.67
NCAPD3-213	ENST00000534532	IGLV5-39	A0A0G2JS06	123 aa		10.85	□□□□□ -0.67
NCAPD3-213	ENST00000534532	FAM240A	A0A1B0GVK7	77 aa		10.85	□□□□□ -0.67
NCAPD3-213	ENST00000534532		A8MTW9	85 aa		10.84	□□□□□ -0.67
NCAPD3-213	ENST00000534532		Q6ZRP5	223 aa		10.84	□□□□□ -0.67
NCAPD3-213	ENST00000534532	C6orf48	Q9UBA6	75 aa		10.83	□□□□□ -0.68
NCAPD3-213	ENST00000534532	CENPF	P49454	3210 aa		10.83	□□□□□ -0.68
NCAPD3-213	ENST00000534532	SPACA4	Q8TDM5	124 aa		10.83	□□□□□ -0.68
NCAPD3-213	ENST00000534532	CRYGA	P11844	174 aa		10.82	□□□□□ -0.68
NCAPD3-213	ENST00000534532	SPATA3	Q8NHX4	192 aa		10.82	□□□□□ -0.68
NCAPD3-213	ENST00000534532	SRCAP	Q6ZRS2	3230 aa		10.81	□□□□□ -0.68
NCAPD3-213	ENST00000534532	MUC4	Q99102	2169 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms