RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 LINC01561Q8N1V8 128 aa6.68□□□□□ -1.34
RPS3-219ENST00000534440 C10orf126Q8N4M7 172 aa6.68□□□□□ -1.34
RPS3-219ENST00000534440 C1orf43Q9BWL3 253 aa6.68□□□□□ -1.34
RPS3-219ENST00000534440 HNRNPA3P51991 378 aaKnown RBP6.67□□□□□ -1.34
RPS3-219ENST00000534440 COX7B2Q8TF08 81 aa6.67□□□□□ -1.34
RPS3-219ENST00000534440 ZNF625Q96I27 306 aaPredicted RBP6.67□□□□□ -1.34
RPS3-219ENST00000534440 TOMM7Q9P0U1 55 aa6.67□□□□□ -1.34
RPS3-219ENST00000534440 NDUFA12Q9UI09 145 aa6.67□□□□□ -1.34
RPS3-219ENST00000534440 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
RPS3-219ENST00000534440 NBDYA0A0U1RRE5 68 aa6.66□□□□□ -1.34
RPS3-219ENST00000534440 NDUFA1O15239 70 aa6.66□□□□□ -1.34
RPS3-219ENST00000534440 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
RPS3-219ENST00000534440 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
RPS3-219ENST00000534440 ORAOV1Q8WV07 137 aa6.66□□□□□ -1.34
RPS3-219ENST00000534440 LY6G6CO95867 125 aa6.65□□□□□ -1.34
RPS3-219ENST00000534440 MALP21145 153 aa6.65□□□□□ -1.34
RPS3-219ENST00000534440 CTAG1AP78358 180 aa6.65□□□□□ -1.34
RPS3-219ENST00000534440 Q8IZM0 81 aa6.65□□□□□ -1.34
RPS3-219ENST00000534440 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.34
RPS3-219ENST00000534440 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
RPS3-219ENST00000534440 K7EP13 123 aa6.64□□□□□ -1.35
RPS3-219ENST00000534440 SPAG11BQ08648 103 aa6.64□□□□□ -1.35
RPS3-219ENST00000534440 C2orf82Q6UX34 121 aa6.64□□□□□ -1.35
RPS3-219ENST00000534440 C6orf223Q8N319 242 aa6.64□□□□□ -1.35
RPS3-219ENST00000534440 LITAFQ99732 161 aa6.64□□□□□ -1.35
RPS3-219ENST00000534440 WFDC2Q14508 124 aa6.63□□□□□ -1.35
RPS3-219ENST00000534440 HIGD2BQ4VC39 106 aa6.63□□□□□ -1.35
RPS3-219ENST00000534440 TTC32Q5I0X7 151 aa6.63□□□□□ -1.35
RPS3-219ENST00000534440 HIGD1BQ9P298 99 aa6.63□□□□□ -1.35
RPS3-219ENST00000534440 DYNC1H1Q14204 4646 aaKnown RBP6.62□□□□□ -1.35
RPS3-219ENST00000534440 M0R2N4 97 aa6.62□□□□□ -1.35
RPS3-219ENST00000534440 APOMO95445 188 aa6.62□□□□□ -1.35
RPS3-219ENST00000534440 SCGB1D4Q6XE38 83 aa6.62□□□□□ -1.35
RPS3-219ENST00000534440 Q6ZR54 194 aa6.62□□□□□ -1.35
RPS3-219ENST00000534440 Q6ZRN7 208 aaPredicted RBP6.62□□□□□ -1.35
RPS3-219ENST00000534440 RMI2Q96E14 147 aa6.62□□□□□ -1.35
RPS3-219ENST00000534440 GVQW2A0A096LPI5 108 aaPredicted RBP6.61□□□□□ -1.35
RPS3-219ENST00000534440 USP17L23D6RBM5 183 aa6.61□□□□□ -1.35
RPS3-219ENST00000534440 PRSS2P07478 247 aa6.61□□□□□ -1.35
RPS3-219ENST00000534440 ADAMTSL4-AS1Q5T5F5 129 aa6.61□□□□□ -1.35
RPS3-219ENST00000534440 C10orf25Q5T742 122 aa6.61□□□□□ -1.35
RPS3-219ENST00000534440 DNAH17Q9UFH2 4485 aa6.61□□□□□ -1.35
RPS3-219ENST00000534440 DNAH11Q96DT5 4516 aa6.6□□□□□ -1.35
RPS3-219ENST00000534440 LECT2O14960 151 aa6.6□□□□□ -1.35
RPS3-219ENST00000534440 HSD52Q0P140 79 aa6.6□□□□□ -1.35
RPS3-219ENST00000534440 C6orf226Q5I0X4 101 aa6.6□□□□□ -1.35
RPS3-219ENST00000534440 CFAP161Q6P656 301 aa6.6□□□□□ -1.35
RPS3-219ENST00000534440 UNQ6190/PRO20217Q6UXQ8 127 aa6.6□□□□□ -1.35
RPS3-219ENST00000534440 NTN5Q8WTR8 489 aaPredicted RBP6.6□□□□□ -1.35
RPS3-219ENST00000534440 A0A0U1RRA0 63 aa6.59□□□□□ -1.35
RPS3-219ENST00000534440 TIMM17BO60830 172 aa6.59□□□□□ -1.35
RPS3-219ENST00000534440 SMIM13P0DJ93 91 aa6.59□□□□□ -1.35
RPS3-219ENST00000534440 HINT1P49773 126 aaPredicted RBP6.59□□□□□ -1.35
RPS3-219ENST00000534440 HERV-K104P63124 156 aa6.59□□□□□ -1.35
RPS3-219ENST00000534440 DAND5Q8N907 189 aa6.59□□□□□ -1.35
RPS3-219ENST00000534440 SNHG12Q9BXW3 62 aa6.59□□□□□ -1.35
RPS3-219ENST00000534440 SPANXB1Q9NS25 103 aaPredicted RBP6.59□□□□□ -1.35
RPS3-219ENST00000534440 CXCL5P42830 114 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 FXYD2P54710 66 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 CKS1BP61024 79 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 C9orf116Q5BN46 136 aaPredicted RBP6.58□□□□□ -1.36
RPS3-219ENST00000534440 MEIG1Q5JSS6 88 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 BVES-AS1Q5T3Y7 98 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 TM2D2Q9BX73 214 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 SPANXDQ9BXN6 97 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 SPANXCQ9NY87 97 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 C6orf48Q9UBA6 75 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 COX11Q9Y6N1 276 aa6.58□□□□□ -1.36
RPS3-219ENST00000534440 PKD1P98161 4303 aa6.57□□□□□ -1.36
RPS3-219ENST00000534440 TMEM238C9JI98 176 aa6.57□□□□□ -1.36
RPS3-219ENST00000534440 SLPIP03973 132 aa6.57□□□□□ -1.36
RPS3-219ENST00000534440 GCSHP23434 173 aa6.57□□□□□ -1.36
RPS3-219ENST00000534440 SOSTDC1Q6X4U4 206 aa6.57□□□□□ -1.36
RPS3-219ENST00000534440 Q6ZRU5 148 aa6.57□□□□□ -1.36
RPS3-219ENST00000534440 HIST1H4GQ99525 98 aa6.57□□□□□ -1.36
RPS3-219ENST00000534440 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
RPS3-219ENST00000534440 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
RPS3-219ENST00000534440 ZNF561-AS1K7EIQ3 104 aa6.56□□□□□ -1.36
RPS3-219ENST00000534440 NPC2P61916 151 aa6.56□□□□□ -1.36
RPS3-219ENST00000534440 BATFQ16520 125 aa6.56□□□□□ -1.36
RPS3-219ENST00000534440 TAL2Q16559 108 aa6.56□□□□□ -1.36
RPS3-219ENST00000534440 SFTA2Q6UW10 78 aa6.56□□□□□ -1.36
RPS3-219ENST00000534440 CEND1Q8N111 149 aa6.56□□□□□ -1.36
RPS3-219ENST00000534440 C2orf48Q96LS8 159 aa6.56□□□□□ -1.36
RPS3-219ENST00000534440 CAMK2N2Q96S95 79 aa6.56□□□□□ -1.36
RPS3-219ENST00000534440 ABCA13Q86UQ4 5058 aa6.55□□□□□ -1.36
RPS3-219ENST00000534440 PSCAO43653 123 aa6.55□□□□□ -1.36
RPS3-219ENST00000534440 PFN2P35080 140 aa6.55□□□□□ -1.36
RPS3-219ENST00000534440 SRSF9Q13242 221 aaKnown RBP eCLIP6.55□□□□□ -1.36
RPS3-219ENST00000534440 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
RPS3-219ENST00000534440 HSPG2P98160 4391 aa6.54□□□□□ -1.36
RPS3-219ENST00000534440 M0R143 59 aa6.54□□□□□ -1.36
RPS3-219ENST00000534440 LINC00158P58513 81 aa6.54□□□□□ -1.36
RPS3-219ENST00000534440 MUSTN1Q8IVN3 82 aa6.54□□□□□ -1.36
RPS3-219ENST00000534440 TRBV30A0A0K0K1B3 111 aa6.53□□□□□ -1.36
RPS3-219ENST00000534440 K7ERJ3 54 aa6.53□□□□□ -1.36
RPS3-219ENST00000534440 SYCNQ0VAF6 134 aa6.53□□□□□ -1.36
RPS3-219ENST00000534440 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
RPS3-219ENST00000534440 CARD19Q96LW7 228 aa6.53□□□□□ -1.36
RPS3-219ENST00000534440 A0A1B0GVY2 172 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms