RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 Q6ZRP5 223 aa13.34□□□□□ -0.27
PKP3-211ENST00000534401 C7orf33Q8WU49 177 aa13.34□□□□□ -0.27
PKP3-211ENST00000534401 CHCHD1Q96BP2 118 aaKnown RBP13.34□□□□□ -0.27
PKP3-211ENST00000534401 LINC00469Q8N7U9 141 aa13.33□□□□□ -0.28
PKP3-211ENST00000534401 COLCA2A8K830 154 aa13.32□□□□□ -0.28
PKP3-211ENST00000534401 IGLC3P0DOY3 106 aa13.32□□□□□ -0.28
PKP3-211ENST00000534401 RPL18AQ02543 176 aaKnown RBP13.32□□□□□ -0.28
PKP3-211ENST00000534401 PMCHL1Q16048 86 aa13.32□□□□□ -0.28
PKP3-211ENST00000534401 ATP5LO75964 103 aa13.31□□□□□ -0.28
PKP3-211ENST00000534401 C9orf116Q5BN46 136 aaPredicted RBP13.31□□□□□ -0.28
PKP3-211ENST00000534401 C6orf226Q5I0X4 101 aa13.31□□□□□ -0.28
PKP3-211ENST00000534401 TRGC2P03986 189 aa13.3□□□□□ -0.28
PKP3-211ENST00000534401 PRSS2P07478 247 aa13.3□□□□□ -0.28
PKP3-211ENST00000534401 PACRGQ96M98 296 aaPredicted RBP13.3□□□□□ -0.28
PKP3-211ENST00000534401 LRP1Q07954 4544 aaKnown RBP13.3□□□□□ -0.28
PKP3-211ENST00000534401 NDUFC2-KCTD14E9PQ53 114 aa13.29□□□□□ -0.28
PKP3-211ENST00000534401 TOMM7Q9P0U1 55 aa13.29□□□□□ -0.28
PKP3-211ENST00000534401 CXCL5P42830 114 aa13.28□□□□□ -0.28
PKP3-211ENST00000534401 F8VRH5 84 aa13.27□□□□□ -0.29
PKP3-211ENST00000534401 OXTP01178 125 aa13.27□□□□□ -0.29
PKP3-211ENST00000534401 CKS1BP61024 79 aa13.27□□□□□ -0.29
PKP3-211ENST00000534401 PRR3P79522 188 aaKnown RBP13.27□□□□□ -0.29
PKP3-211ENST00000534401 IGLV5-39A0A0G2JS06 123 aa13.26□□□□□ -0.29
PKP3-211ENST00000534401 KRTAP7-1Q8IUC3 87 aa13.26□□□□□ -0.29
PKP3-211ENST00000534401 FAT3Q8TDW7 4589 aa13.26□□□□□ -0.29
PKP3-211ENST00000534401 ZNF22P17026 224 aaPredicted RBP13.25□□□□□ -0.29
PKP3-211ENST00000534401 LINC00310P59036 64 aa13.25□□□□□ -0.29
PKP3-211ENST00000534401 COX7B2Q8TF08 81 aa13.25□□□□□ -0.29
PKP3-211ENST00000534401 H3BRM9 83 aa13.24□□□□□ -0.29
PKP3-211ENST00000534401 SPINK8P0C7L1 97 aa13.24□□□□□ -0.29
PKP3-211ENST00000534401 ODF1Q14990 250 aa13.24□□□□□ -0.29
PKP3-211ENST00000534401 TRAV12-1A0A0B4J245 112 aa13.23□□□□□ -0.29
PKP3-211ENST00000534401 GAGE2EQ4V326 116 aa13.23□□□□□ -0.29
PKP3-211ENST00000534401 C9orf129Q5T035 196 aaKnown RBP13.23□□□□□ -0.29
PKP3-211ENST00000534401 BAGE3Q86Y29 109 aa13.23□□□□□ -0.29
PKP3-211ENST00000534401 GAGE2DQ9UEU5 116 aa13.23□□□□□ -0.29
PKP3-211ENST00000534401 FAM168BA1KXE4 195 aa13.22□□□□□ -0.29
PKP3-211ENST00000534401 NDUFA6P56556 154 aa13.22□□□□□ -0.29
PKP3-211ENST00000534401 IFI27L1Q96BM0 104 aa13.22□□□□□ -0.29
PKP3-211ENST00000534401 C11orf86A6NJI1 115 aa13.21□□□□□ -0.29
PKP3-211ENST00000534401 HSBP1O75506 76 aa13.2□□□□□ -0.3
PKP3-211ENST00000534401 SRSF9Q13242 221 aaKnown RBP eCLIP13.2□□□□□ -0.3
PKP3-211ENST00000534401 PHF5AQ7RTV0 110 aaKnown RBP13.2□□□□□ -0.3
PKP3-211ENST00000534401 FAM19A2Q8N3H0 131 aa13.19□□□□□ -0.3
PKP3-211ENST00000534401 SERF1AO75920 110 aa13.18□□□□□ -0.3
PKP3-211ENST00000534401 CHTOPQ9Y3Y2 248 aaKnown RBP13.18□□□□□ -0.3
PKP3-211ENST00000534401 J3QL48 77 aa13.16□□□□□ -0.3
PKP3-211ENST00000534401 NUPR1O60356 82 aa13.16□□□□□ -0.3
PKP3-211ENST00000534401 PSORS1C2Q9UIG4 136 aa13.16□□□□□ -0.3
PKP3-211ENST00000534401 SCO1O75880 301 aa13.15□□□□□ -0.3
PKP3-211ENST00000534401 KRTAP11-1Q8IUC1 163 aa13.15□□□□□ -0.3
PKP3-211ENST00000534401 SPINK6Q6UWN8 80 aa13.14□□□□□ -0.31
PKP3-211ENST00000534401 FAM19A5Q7Z5A7 132 aaPredicted RBP13.14□□□□□ -0.31
PKP3-211ENST00000534401 MT1HL1P0DM35 61 aa13.12□□□□□ -0.31
PKP3-211ENST00000534401 TMEM170BQ5T4T1 132 aa13.12□□□□□ -0.31
PKP3-211ENST00000534401 XAGE1AQ9HD64 81 aa13.12□□□□□ -0.31
PKP3-211ENST00000534401 TMEM223A0PJW6 202 aa13.11□□□□□ -0.31
PKP3-211ENST00000534401 M0QXV9 152 aa13.11□□□□□ -0.31
PKP3-211ENST00000534401 SERTAD4-AS1Q5TG53 156 aa13.11□□□□□ -0.31
PKP3-211ENST00000534401 PLA2G2DQ9UNK4 145 aa13.11□□□□□ -0.31
PKP3-211ENST00000534401 LEPROTL1O95214 131 aa13.1□□□□□ -0.31
PKP3-211ENST00000534401 ZNF625Q96I27 306 aaPredicted RBP13.1□□□□□ -0.31
PKP3-211ENST00000534401 TP73-AS1Q9UF72 201 aa13.1□□□□□ -0.31
PKP3-211ENST00000534401 HIST1H2BKO60814 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST1H2BJP06899 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST1H2BOP23527 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST1H2BBP33778 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST1H2BDP58876 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST1H2BCP62807 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST2H2BEQ16778 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.08□□□□□ -0.32
PKP3-211ENST00000534401 SFTA2Q6UW10 78 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST1H2BHQ93079 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST1H2BNQ99877 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 HIST1H2BMQ99879 126 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 C22orf24Q9Y442 160 aa13.08□□□□□ -0.32
PKP3-211ENST00000534401 IGLV5-37A0A075B6J1 123 aa13.06□□□□□ -0.32
PKP3-211ENST00000534401 COX17Q14061 63 aa13.06□□□□□ -0.32
PKP3-211ENST00000534401 LINC01600Q96MT4 127 aa13.06□□□□□ -0.32
PKP3-211ENST00000534401 HSPB8Q9UJY1 196 aa13.06□□□□□ -0.32
PKP3-211ENST00000534401 C1orf137Q5JT78 98 aa13.05□□□□□ -0.32
PKP3-211ENST00000534401 IGLV7-43P04211 117 aa13.04□□□□□ -0.32
PKP3-211ENST00000534401 ERG28Q9UKR5 140 aa13.04□□□□□ -0.32
PKP3-211ENST00000534401 LBHQ53QV2 105 aaPredicted RBP13.03□□□□□ -0.32
PKP3-211ENST00000534401 FABP4P15090 132 aa13.01□□□□□ -0.33
PKP3-211ENST00000534401 TNXBP22105 4242 aa13□□□□□ -0.33
PKP3-211ENST00000534401 PFN2P35080 140 aa13□□□□□ -0.33
PKP3-211ENST00000534401 UBE2BP63146 152 aa13□□□□□ -0.33
PKP3-211ENST00000534401 COA6Q5JTJ3 125 aaKnown RBP13□□□□□ -0.33
PKP3-211ENST00000534401 REG3GQ6UW15 175 aa13□□□□□ -0.33
PKP3-211ENST00000534401 MRPL55Q7Z7F7 128 aaKnown RBP13□□□□□ -0.33
PKP3-211ENST00000534401 PLNP26678 52 aa12.99□□□□□ -0.33
PKP3-211ENST00000534401 SND1-IT1Q9HBX3 110 aa12.99□□□□□ -0.33
PKP3-211ENST00000534401 KRTAP10-8P60410 259 aa12.98□□□□□ -0.33
PKP3-211ENST00000534401 H0Y8G0 127 aa12.97□□□□□ -0.33
PKP3-211ENST00000534401 LINC00167Q96N53 147 aa12.97□□□□□ -0.33
PKP3-211ENST00000534401 DPM2O94777 84 aa12.96□□□□□ -0.33
PKP3-211ENST00000534401 VPREB1P12018 145 aa12.96□□□□□ -0.33
PKP3-211ENST00000534401 DIRC1Q969H9 104 aa12.95□□□□□ -0.34
PKP3-211ENST00000534401 MAP1LC3CQ9BXW4 147 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms