RNA–Protein interactions for RNA: ENST00000534242.5

SHARPIN-209, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 933 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-209ENST00000534242 HERVK_113P63121 156 aa13.61□□□□□ -0.23
SHARPIN-209ENST00000534242 CDKN2A-AS1Q9UH64 79 aa13.61□□□□□ -0.23
SHARPIN-209ENST00000534242 MT-ND4LP03901 98 aa13.6□□□□□ -0.23
SHARPIN-209ENST00000534242 LBHQ53QV2 105 aaPredicted RBP13.6□□□□□ -0.23
SHARPIN-209ENST00000534242 F8VRH5 84 aa13.59□□□□□ -0.23
SHARPIN-209ENST00000534242 SEC11AP67812 179 aa13.59□□□□□ -0.23
SHARPIN-209ENST00000534242 CTDSP1Q9GZU7 261 aa13.59□□□□□ -0.23
SHARPIN-209ENST00000534242 NXT2Q9NPJ8 142 aaKnown RBP13.59□□□□□ -0.23
SHARPIN-209ENST00000534242 PAPPA-AS1Q5QFB9 102 aa13.58□□□□□ -0.24
SHARPIN-209ENST00000534242 MUC2Q02817 5179 aa13.57□□□□□ -0.24
SHARPIN-209ENST00000534242 TIMM17AQ99595 171 aa13.57□□□□□ -0.24
SHARPIN-209ENST00000534242 GEMIN7Q9H840 131 aaKnown RBP13.57□□□□□ -0.24
SHARPIN-209ENST00000534242 MRPL55Q7Z7F7 128 aaKnown RBP13.56□□□□□ -0.24
SHARPIN-209ENST00000534242 TP73-AS1Q9UF72 201 aa13.56□□□□□ -0.24
SHARPIN-209ENST00000534242 G0S2P27469 103 aa13.54□□□□□ -0.24
SHARPIN-209ENST00000534242 CXCL5P42830 114 aa13.54□□□□□ -0.24
SHARPIN-209ENST00000534242 TOMM6Q96B49 74 aa13.54□□□□□ -0.24
SHARPIN-209ENST00000534242 BCE1O60756 84 aa13.53□□□□□ -0.24
SHARPIN-209ENST00000534242 RPL28P46779 137 aaKnown RBP13.52□□□□□ -0.25
SHARPIN-209ENST00000534242 A0A087X002 238 aa13.51□□□□□ -0.25
SHARPIN-209ENST00000534242 SMIM1B2RUZ4 78 aa13.51□□□□□ -0.25
SHARPIN-209ENST00000534242 TSPAN13O95857 204 aa13.51□□□□□ -0.25
SHARPIN-209ENST00000534242 ERASQ7Z444 233 aa13.5□□□□□ -0.25
SHARPIN-209ENST00000534242 KIAA1644Q3SXP7 199 aa13.49□□□□□ -0.25
SHARPIN-209ENST00000534242 LINC00167Q96N53 147 aa13.49□□□□□ -0.25
SHARPIN-209ENST00000534242 RPL37AP8A6NKH3 93 aa13.48□□□□□ -0.25
SHARPIN-209ENST00000534242 PDZD11Q5EBL8 140 aa13.48□□□□□ -0.25
SHARPIN-209ENST00000534242 COX7B2Q8TF08 81 aa13.48□□□□□ -0.25
SHARPIN-209ENST00000534242 SCGB3A1Q96QR1 104 aa13.48□□□□□ -0.25
SHARPIN-209ENST00000534242 TINCRA0A1B0GVN0 87 aa13.47□□□□□ -0.25
SHARPIN-209ENST00000534242 CRYGAP11844 174 aa13.47□□□□□ -0.25
SHARPIN-209ENST00000534242 ADCYAP1P18509 176 aa13.47□□□□□ -0.25
SHARPIN-209ENST00000534242 IGLV5-45A0A087WSX0 123 aa13.46□□□□□ -0.25
SHARPIN-209ENST00000534242 GAGE10A6NGK3 116 aa13.45□□□□□ -0.26
SHARPIN-209ENST00000534242 RAB14P61106 215 aa13.45□□□□□ -0.26
SHARPIN-209ENST00000534242 TYMSOSQ8TAI1 123 aa13.45□□□□□ -0.26
SHARPIN-209ENST00000534242 IGLV5-37A0A075B6J1 123 aa13.42□□□□□ -0.26
SHARPIN-209ENST00000534242 RAB5BP61020 215 aa13.42□□□□□ -0.26
SHARPIN-209ENST00000534242 ANAPC11Q9NYG5 84 aa13.42□□□□□ -0.26
SHARPIN-209ENST00000534242 SPINK8P0C7L1 97 aa13.41□□□□□ -0.26
SHARPIN-209ENST00000534242 CST9LQ9H4G1 147 aa13.41□□□□□ -0.26
SHARPIN-209ENST00000534242 LINC01549A6NIU2 74 aa13.4□□□□□ -0.26
SHARPIN-209ENST00000534242 KRTAP13-1Q8IUC0 172 aa13.4□□□□□ -0.26
SHARPIN-209ENST00000534242 LINC01546A6NGU7 62 aa13.39□□□□□ -0.27
SHARPIN-209ENST00000534242 UBE2AP49459 152 aa13.39□□□□□ -0.27
SHARPIN-209ENST00000534242 NKAPP1Q8N9T2 125 aa13.39□□□□□ -0.27
SHARPIN-209ENST00000534242 TRAV9-1A0A075B6T8 112 aa13.38□□□□□ -0.27
SHARPIN-209ENST00000534242 KRTAP13-2Q52LG2 175 aa13.38□□□□□ -0.27
SHARPIN-209ENST00000534242 A0A0U1RQV1 116 aa13.37□□□□□ -0.27
SHARPIN-209ENST00000534242 PMVKQ15126 192 aa13.37□□□□□ -0.27
SHARPIN-209ENST00000534242 MRPL18Q9H0U6 180 aaKnown RBP13.36□□□□□ -0.27
SHARPIN-209ENST00000534242 ATP5LO75964 103 aa13.35□□□□□ -0.27
SHARPIN-209ENST00000534242 GNB1LQ9BYB4 327 aa13.35□□□□□ -0.27
SHARPIN-209ENST00000534242 IGKV2-28A0A075B6P5 120 aa13.34□□□□□ -0.27
SHARPIN-209ENST00000534242 H3BRM9 83 aa13.34□□□□□ -0.27
SHARPIN-209ENST00000534242 SCO1O75880 301 aa13.34□□□□□ -0.27
SHARPIN-209ENST00000534242 IGKV2D-28P01615 120 aa13.34□□□□□ -0.27
SHARPIN-209ENST00000534242 FAM229BQ4G0N7 80 aa13.34□□□□□ -0.27
SHARPIN-209ENST00000534242 CLLU1Q5K131 121 aa13.34□□□□□ -0.27
SHARPIN-209ENST00000534242 PFN2P35080 140 aa13.31□□□□□ -0.28
SHARPIN-209ENST00000534242 FA2HQ7L5A8 372 aa13.31□□□□□ -0.28
SHARPIN-209ENST00000534242 SMCO4Q9NRQ5 59 aa13.31□□□□□ -0.28
SHARPIN-209ENST00000534242 TMEM218A2RU14 115 aa13.3□□□□□ -0.28
SHARPIN-209ENST00000534242 S100PP25815 95 aa13.3□□□□□ -0.28
SHARPIN-209ENST00000534242 LINC00304Q8N9R0 145 aa13.3□□□□□ -0.28
SHARPIN-209ENST00000534242 RETNLBQ9BQ08 111 aa13.3□□□□□ -0.28
SHARPIN-209ENST00000534242 IGLV5-39A0A0G2JS06 123 aa13.29□□□□□ -0.28
SHARPIN-209ENST00000534242 IGLC3P0DOY3 106 aa13.29□□□□□ -0.28
SHARPIN-209ENST00000534242 PRLHP81277 87 aa13.29□□□□□ -0.28
SHARPIN-209ENST00000534242 UQCC3Q6UW78 93 aa13.29□□□□□ -0.28
SHARPIN-209ENST00000534242 VPREB1P12018 145 aa13.27□□□□□ -0.29
SHARPIN-209ENST00000534242 COX19Q49B96 90 aa13.27□□□□□ -0.29
SHARPIN-209ENST00000534242 TMEM126AQ9H061 195 aa13.27□□□□□ -0.29
SHARPIN-209ENST00000534242 IGKV2D-26A0A0A0MRZ7 120 aa13.26□□□□□ -0.29
SHARPIN-209ENST00000534242 FAM19A1Q7Z5A9 133 aa13.26□□□□□ -0.29
SHARPIN-209ENST00000534242 SND1-IT1Q9HBX3 110 aa13.26□□□□□ -0.29
SHARPIN-209ENST00000534242 ERG28Q9UKR5 140 aa13.26□□□□□ -0.29
SHARPIN-209ENST00000534242 MUC17Q685J3 4493 aa13.25□□□□□ -0.29
SHARPIN-209ENST00000534242 TMEM238C9JI98 176 aa13.25□□□□□ -0.29
SHARPIN-209ENST00000534242 ZNF22P17026 224 aaPredicted RBP13.25□□□□□ -0.29
SHARPIN-209ENST00000534242 FABP9Q0Z7S8 132 aa13.25□□□□□ -0.29
SHARPIN-209ENST00000534242 FAT4Q6V0I7 4981 aa13.24□□□□□ -0.29
SHARPIN-209ENST00000534242 NDUFA6P56556 154 aa13.24□□□□□ -0.29
SHARPIN-209ENST00000534242 A0A096LNJ9 63 aa13.23□□□□□ -0.29
SHARPIN-209ENST00000534242 RPL24P83731 157 aaKnown RBP13.23□□□□□ -0.29
SHARPIN-209ENST00000534242 SEC11CQ9BY50 192 aa13.23□□□□□ -0.29
SHARPIN-209ENST00000534242 M0R378 163 aa13.22□□□□□ -0.29
SHARPIN-209ENST00000534242 COX17Q14061 63 aa13.22□□□□□ -0.29
SHARPIN-209ENST00000534242 Q8NDZ9 215 aa13.21□□□□□ -0.29
SHARPIN-209ENST00000534242 ZNF625Q96I27 306 aaPredicted RBP13.21□□□□□ -0.29
SHARPIN-209ENST00000534242 TPRXLQ17RH7 258 aa13.2□□□□□ -0.3
SHARPIN-209ENST00000534242 CTAG1AP78358 180 aa13.19□□□□□ -0.3
SHARPIN-209ENST00000534242 LCE2AQ5TA79 106 aaPredicted RBP13.19□□□□□ -0.3
SHARPIN-209ENST00000534242 PLEKHB2Q96CS7 222 aa13.19□□□□□ -0.3
SHARPIN-209ENST00000534242 URB1-AS1Q96HZ7 61 aa13.19□□□□□ -0.3
SHARPIN-209ENST00000534242 CDIP1Q9H305 208 aa13.19□□□□□ -0.3
SHARPIN-209ENST00000534242 IGLV7-46A0A075B6I9 117 aa13.17□□□□□ -0.3
SHARPIN-209ENST00000534242 KRTAP9-2Q9BYQ4 174 aa13.17□□□□□ -0.3
SHARPIN-209ENST00000534242 HBDP02042 147 aa13.16□□□□□ -0.3
SHARPIN-209ENST00000534242 LINC00614P0C842 121 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms