RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 TMEM167BQ9NRX6 74 aa1.87□□□□□ -2.11
ATPAF1-211ENST00000534216 KNTC1P50748 2209 aa1.87□□□□□ -2.11
ATPAF1-211ENST00000534216 SPAG17Q6Q759 2223 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 IGHV3-21A0A0B4J1V1 117 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 A0A0J9YX75 114 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 LCE6AA0A183 80 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 A0A1B0GUT8 65 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 LOC730098B7Z3J9 87 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 H7C2G1 150 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 M0R135 149 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 M0R1W7 72 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 HMGN4O00479 90 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 NDUFA3O95167 84 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 CTSGP08311 255 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 IAPPP10997 89 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 CSAG1Q6PB30 78 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 LINC00304Q8N9R0 145 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 WFDC9Q8NEX5 89 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 ARHGAP5-AS1Q96IT6 56 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 LINC00467Q9BRT7 94 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 UNC13CQ8NB66 2214 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 ZFHX3Q15911 3703 aa1.86□□□□□ -2.11
ATPAF1-211ENST00000534216 CACNA1CQ13936 2221 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 IGHV3-73A0A0B4J1V6 119 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 TRAV12-3A0A0B4J271 114 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 CCL22O00626 93 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 MSMBP08118 114 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 SAA2P0DJI9 122 aaPredicted RBP1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 ELOF1P60002 83 aaKnown RBP1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 FAM27BQ5VT28 67 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 LINC00322Q6ZN03 302 aaPredicted RBP1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 ZCCHC13Q8WW36 166 aaKnown RBP1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 Q9BRP9 147 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 TMEM14CQ9P0S9 112 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 COL4A2P08572 1712 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 SDK1Q7Z5N4 2213 aa1.85□□□□□ -2.11
ATPAF1-211ENST00000534216 ABCA4P78363 2273 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 RP1P56715 2156 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 IGKV1D-42A0A075B6H8 117 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 A0A087WSZ3 146 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 IGHV3-15A0A0B4J1V0 119 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 IGHV7-4-1A0A0J9YVY3 117 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 TRBV6-5A0A0K0K1A5 114 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 FXYD4P59646 89 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 MIR22HGQ0VDD5 57 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 NNATQ16517 81 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 SPANXN5Q5MJ07 72 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 BRD3OSQ6XYD6 125 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 Q8TAT8 98 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 MUC7Q8TAX7 377 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 CIRBP-AS1Q8TBR5 109 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 C20orf166-AS1Q96NR2 134 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 C14orf132Q9NPU4 83 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 CCL26Q9Y258 94 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 CADP27708 2225 aa1.84□□□□□ -2.11
ATPAF1-211ENST00000534216 C17orf98A8MV24 154 aa1.83□□□□□ -2.12
ATPAF1-211ENST00000534216 H3BSH0 61 aa1.83□□□□□ -2.12
ATPAF1-211ENST00000534216 BPY2O14599 106 aa1.83□□□□□ -2.12
ATPAF1-211ENST00000534216 CNBPP62633 177 aaKnown RBP1.83□□□□□ -2.12
ATPAF1-211ENST00000534216 ZNF625Q96I27 306 aaPredicted RBP1.83□□□□□ -2.12
ATPAF1-211ENST00000534216 TTTY12Q9BZ98 90 aa1.83□□□□□ -2.12
ATPAF1-211ENST00000534216 LINC01558Q9Y6Z2 57 aa1.83□□□□□ -2.12
ATPAF1-211ENST00000534216 UNC79Q9P2D8 2635 aa1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 IGKV1D-37A0A075B6S9 117 aa1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 IGHV3-49A0A0A0MS15 119 aa1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 TRAV21A0A0B4J279 112 aa1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 TRBV6-1A0A0K0K1D8 114 aa1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 K7ERS5 55 aa1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 HIGD2AQ9BW72 106 aa1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 FAM215AQ9Y5M1 114 aa1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 R4GMQ9 66 aa1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 GOLGB1Q14789 3259 aaKnown RBP1.82□□□□□ -2.12
ATPAF1-211ENST00000534216 FBN1P35555 2871 aaKnown RBP1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 IGKV1OR2-108A0A075B7D4 117 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 IGKV3D-11A0A0A0MRZ8 115 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 M0R3E3 92 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 SPINK7P58062 85 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 DEFB113Q30KQ7 82 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 KRTAP26-1Q6PEX3 210 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 CHCHD7Q9BUK0 85 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 UBL5Q9BZL1 73 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 ORMDL1Q9P0S3 153 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 LENEPQ9Y5L5 61 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 UTRNP46939 3433 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 SEC16AO15027 2179 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 F5P12259 2224 aa1.81□□□□□ -2.12
ATPAF1-211ENST00000534216 IGHV1-46P01743 117 aa1.8□□□□□ -2.12
ATPAF1-211ENST00000534216 FAM74A4Q5TZK3 123 aa1.8□□□□□ -2.12
ATPAF1-211ENST00000534216 MIR7-3HGQ8N6C7 128 aa1.8□□□□□ -2.12
ATPAF1-211ENST00000534216 TMEM105Q8N8V8 129 aa1.8□□□□□ -2.12
ATPAF1-211ENST00000534216 TRBV10-1A0A0K0K1A3 114 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 ODF3BA8MYP8 253 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 PDE6GP18545 87 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 KRTAP12-4P60329 112 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 SPAG11BQ08648 103 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 KRTAP25-1Q3LHN0 102 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 SPAG11AQ6PDA7 123 aa1.79□□□□□ -2.12
ATPAF1-211ENST00000534216 Q86TA4 180 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms