RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 CKS2P33552 79 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 IFI27P40305 119 aaPredicted RBP1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 CTRLP40313 264 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 PLP1P60201 277 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 HERV-K104P63124 156 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 SAPCD1Q5SSQ6 148 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 RASL11AQ6T310 242 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 LYZL1Q6UWQ5 148 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 FAM231DQ6ZW35 169 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 AMN1Q8IY45 258 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 MTURNQ8N3F0 131 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 SLC25A29Q8N8R3 303 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 OR10AG1Q8NH19 301 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 ATP6V0E2Q8NHE4 81 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 FAM167A-AS1Q96KT0 104 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 GPR82Q96P67 336 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 SHANK2-AS3Q9BTD1 123 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 AGPAT4-IT1Q9H0P7 198 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 CST9LQ9H4G1 147 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 KLK12Q9UKR0 248 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 SPCS1Q9Y6A9 102 aa1.82□□□□□ -2.12
CHMP4A-208ENST00000534106 A0A1B0GXF2 115 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 NDUFAF8A1L188 74 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 FAM231BA6NCW3 169 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 KLLNB2CW77 178 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 H7C1H1 209 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 K7EMI3 77 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 K7EP34 96 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 K7ERU9 68 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 M0R3E3 92 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 NPYP01303 97 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 SMIM13P0DJ93 91 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 FABP2P12104 132 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 GATA1P15976 413 aaPredicted RBP1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 LEPP41159 167 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 ATP5IP56385 69 aaPredicted RBP1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 RPS20P60866 119 aaKnown RBP1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 PRR3P79522 188 aaKnown RBP1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 HSD52Q0P140 79 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 LAGE3Q14657 143 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 MRPL51Q4U2R6 128 aaKnown RBP1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 OCIAD2Q56VL3 154 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 SAMD13Q5VXD3 122 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 ENHOQ6UWT2 76 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 S100A7AQ86SG5 101 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 ORMDL3Q8N138 153 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 ARL6IP6Q8N6S5 226 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 C9orf163Q8N9P6 203 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 FER1L6-AS1Q8NA97 138 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 RASL10AQ92737 203 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 UBE2WQ96B02 151 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 IFI27L1Q96BM0 104 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 SMIM12Q96EX1 92 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 FAM19A4Q96LR4 140 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 OPRPNQ99935 248 aaPredicted RBP1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 GTSF1LQ9H1H1 148 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 NHP2Q9NX24 153 aaKnown RBP1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 PYGO1Q9Y3Y4 419 aa1.81□□□□□ -2.12
CHMP4A-208ENST00000534106 TRBV19A0A075B6N1 114 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 TRAV26-2A0A0B4J265 109 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 A0A1B0GW15 77 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 H3BRM9 83 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 H3BVH4 76 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 DPM2O94777 84 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 IGKCP01834 107 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 COX8AP10176 69 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 RPL7P18124 248 aaKnown RBP1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 S100A4P26447 101 aaKnown RBP1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 KRTAP12-2P59991 146 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 RBX1P62877 108 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 SEC11AP67812 179 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 CIRBPQ14011 172 aaKnown RBP1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 Q1RN00 199 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 SPANXN1Q5VSR9 72 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 LINC01545Q5VT33 79 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 Q6AWC8 147 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 SFTA2Q6UW10 78 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 SPINK6Q6UWN8 80 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 Q6ZRP5 223 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 NOTCH2NLQ7Z3S9 236 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 PCP2Q8IVA1 136 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 ZFAND2AQ8N6M9 145 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 TMEM75Q8N9X5 138 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 OR5A1Q8NGJ0 315 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 FAM218AQ96MZ4 157 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 HIST1H4GQ99525 98 aa1.8□□□□□ -2.12
CHMP4A-208ENST00000534106 A0A087X002 238 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 TRAV4A0A0B4J268 109 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 LOC107984156A0A0G2JMH3 177 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 A0A1W2PPM0 123 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 C19orf71A6NCJ1 209 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 H7C2G1 150 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 M0R381 172 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 ATP5LO75964 103 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 TSPAN13O95857 204 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 SMIM17P0DL12 118 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 PSMB2P49721 201 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 HERVK_113P61574 105 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 706.9 ms