RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PSPHP1O15172 72 aa2.9□□□□□ -1.95
ITGB1-219ENST00000534049 GNRH2O43555 120 aa2.9□□□□□ -1.95
ITGB1-219ENST00000534049 PRM2P04554 102 aa2.9□□□□□ -1.95
ITGB1-219ENST00000534049 PDE6GP18545 87 aa2.9□□□□□ -1.95
ITGB1-219ENST00000534049 DEFB134Q4QY38 66 aa2.9□□□□□ -1.95
ITGB1-219ENST00000534049 TMEM254Q8TBM7 123 aa2.9□□□□□ -1.95
ITGB1-219ENST00000534049 MRPL36Q9P0J6 103 aaKnown RBP2.9□□□□□ -1.95
ITGB1-219ENST00000534049 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
ITGB1-219ENST00000534049 VPS13CQ709C8 3753 aa2.9□□□□□ -1.95
ITGB1-219ENST00000534049 TACC2O95359 2948 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 SNRNP200O75643 2136 aaKnown RBP2.89□□□□□ -1.95
ITGB1-219ENST00000534049 SPTBP11277 2137 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 IGLV3-12A0A075B6K2 115 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 IGKV1OR2-108A0A075B7D4 117 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 TRBV6-8A0A0A6YYG3 113 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 TRAV22A0A0B4J277 110 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 LINC00313P59037 77 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 SPINK9Q5DT21 86 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 IGFL3Q6UXB1 125 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 PATE2Q6UY27 113 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 C14orf178Q8N769 122 aaPredicted RBP2.89□□□□□ -1.95
ITGB1-219ENST00000534049 Q9HAA7 133 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 CELA1Q9UNI1 258 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 C2CD3Q4AC94 2353 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 HIVEP1P15822 2718 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 CREBBPQ92793 2442 aa2.89□□□□□ -1.95
ITGB1-219ENST00000534049 ANK3Q12955 4377 aaKnown RBP2.88□□□□□ -1.95
ITGB1-219ENST00000534049 TRGV3P03979 118 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 CRIP1P50238 77 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 ELOF1P60002 83 aaKnown RBP2.88□□□□□ -1.95
ITGB1-219ENST00000534049 PRR3P79522 188 aaKnown RBP2.88□□□□□ -1.95
ITGB1-219ENST00000534049 FBXL19-AS1Q494R0 122 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 FAM229BQ4G0N7 80 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 C9orf66Q5T8R8 295 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 ENHOQ6UWT2 76 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 SCXQ7RTU7 201 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 ITLN2Q8WWU7 325 aaPredicted RBP2.88□□□□□ -1.95
ITGB1-219ENST00000534049 CDC42SE1Q9NRR8 79 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 NDUFA12Q9UI09 145 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 SNURFQ9Y675 71 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 KIF25-AS1Q9Y6Z4 181 aa2.88□□□□□ -1.95
ITGB1-219ENST00000534049 PRRC2AP48634 2157 aaKnown RBP2.88□□□□□ -1.95
ITGB1-219ENST00000534049 ESPL1Q14674 2120 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 SEC16AO15027 2179 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 C16orf90A8MZG2 172 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 HCG22E2RYF7 251 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 C3orf84H3BNL1 204 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 NDUFB1O75438 58 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 STATHP02808 62 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 TSPEAR-AS2P59090 65 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 LYZP61626 148 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 NREPQ16612 68 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 LINC00337Q8N6G1 96 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 C22orf24Q9Y442 160 aa2.87□□□□□ -1.95
ITGB1-219ENST00000534049 ANKHD1Q8IWZ3 2542 aaKnown RBP2.86□□□□□ -1.95
ITGB1-219ENST00000534049 ANK2Q01484 3957 aa2.86□□□□□ -1.95
ITGB1-219ENST00000534049 IGHV3-16A0A0C4DH30 117 aa2.86□□□□□ -1.95
ITGB1-219ENST00000534049 C12orf77C9JDV5 145 aa2.86□□□□□ -1.95
ITGB1-219ENST00000534049 H0YGG7 62 aa2.86□□□□□ -1.95
ITGB1-219ENST00000534049 C6orf99Q4VX62 202 aa2.86□□□□□ -1.95
ITGB1-219ENST00000534049 C9orf116Q5BN46 136 aaPredicted RBP2.86□□□□□ -1.95
ITGB1-219ENST00000534049 REG3GQ6UW15 175 aa2.86□□□□□ -1.95
ITGB1-219ENST00000534049 C14orf132Q9NPU4 83 aa2.86□□□□□ -1.95
ITGB1-219ENST00000534049 ORMDL1Q9P0S3 153 aa2.86□□□□□ -1.95
ITGB1-219ENST00000534049 CNTRLQ7Z7A1 2325 aa2.86□□□□□ -1.95
ITGB1-219ENST00000534049 HRNRQ86YZ3 2850 aaPredicted RBP2.86□□□□□ -1.95
ITGB1-219ENST00000534049 DIDO1Q9BTC0 2240 aaKnown RBP2.85□□□□□ -1.95
ITGB1-219ENST00000534049 IGKV1D-37A0A075B6S9 117 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 IGKV3D-11A0A0A0MRZ8 115 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 IGHV6-1A0A0B4J1U7 121 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 TRAV12-3A0A0B4J271 114 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 IGHV1-18A0A0C4DH31 117 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 LOC101927531A0A1B0GV80 90 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 CHKB-CPT1BH3BT56 60 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 PSCAO43653 123 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 SAA2P0DJI9 122 aaPredicted RBP2.85□□□□□ -1.95
ITGB1-219ENST00000534049 RPL27AP46776 148 aaKnown RBP2.85□□□□□ -1.95
ITGB1-219ENST00000534049 FAM74A4Q5TZK3 123 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 Q5VV11 94 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 C11orf72Q8NBR9 251 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 SPTSSBQ8NFR3 76 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 NDUFA4L2Q9NRX3 87 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 SVILO95425 2214 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 PKDREJQ9NTG1 2253 aa2.85□□□□□ -1.95
ITGB1-219ENST00000534049 SPG11Q96JI7 2443 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 DOCK10Q96BY6 2186 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 SETD2Q9BYW2 2564 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-219ENST00000534049 K7EQG2 157 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 LHBP01229 141 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 CLPSP04118 112 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 IGHV3-30-3P0DP02 117 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 LINC00242Q5T6M2 205 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 LINC00167Q96N53 147 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 ANAPC11Q9NYG5 84 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 LENEPQ9Y5L5 61 aa2.84□□□□□ -1.95
ITGB1-219ENST00000534049 CACNA1CQ13936 2221 aa2.84□□□□□ -1.96
ITGB1-219ENST00000534049 NSD1Q96L73 2696 aaPredicted RBP2.84□□□□□ -1.96
ITGB1-219ENST00000534049 ARID1AO14497 2285 aa2.84□□□□□ -1.96
ITGB1-219ENST00000534049 ABCA2Q9BZC7 2435 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms