RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 K7EMI3 77 aa10□□□□□ -0.81
CAPRIN1-216ENST00000534042 HERVK_113P63121 156 aa10□□□□□ -0.81
CAPRIN1-216ENST00000534042 GEMIN7Q9H840 131 aaKnown RBP10□□□□□ -0.81
CAPRIN1-216ENST00000534042 TP73-AS1Q9UF72 201 aa10□□□□□ -0.81
CAPRIN1-216ENST00000534042 F8VRH5 84 aa9.99□□□□□ -0.81
CAPRIN1-216ENST00000534042 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
CAPRIN1-216ENST00000534042 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
CAPRIN1-216ENST00000534042 MRPL55Q7Z7F7 128 aaKnown RBP9.99□□□□□ -0.81
CAPRIN1-216ENST00000534042 CDKN2A-AS1Q9UH64 79 aa9.99□□□□□ -0.81
CAPRIN1-216ENST00000534042 ANAPC16Q96DE5 110 aa9.98□□□□□ -0.81
CAPRIN1-216ENST00000534042 NXT2Q9NPJ8 142 aaKnown RBP9.98□□□□□ -0.81
CAPRIN1-216ENST00000534042 A0A0U1RQV1 116 aa9.97□□□□□ -0.81
CAPRIN1-216ENST00000534042 A0A1B0GVG6 124 aa9.97□□□□□ -0.81
CAPRIN1-216ENST00000534042 BCE1O60756 84 aa9.97□□□□□ -0.81
CAPRIN1-216ENST00000534042 MT-ND4LP03901 98 aa9.97□□□□□ -0.81
CAPRIN1-216ENST00000534042 G0S2P27469 103 aa9.97□□□□□ -0.81
CAPRIN1-216ENST00000534042 CXCL5P42830 114 aa9.97□□□□□ -0.81
CAPRIN1-216ENST00000534042 CRYGAP11844 174 aa9.96□□□□□ -0.82
CAPRIN1-216ENST00000534042 PNRC1Q12796 327 aaPredicted RBP9.96□□□□□ -0.82
CAPRIN1-216ENST00000534042 A0A087X002 238 aa9.95□□□□□ -0.82
CAPRIN1-216ENST00000534042 TYMSOSQ8TAI1 123 aa9.95□□□□□ -0.82
CAPRIN1-216ENST00000534042 TIMM17AQ99595 171 aa9.95□□□□□ -0.82
CAPRIN1-216ENST00000534042 LINC00167Q96N53 147 aa9.94□□□□□ -0.82
CAPRIN1-216ENST00000534042 RPL37AP8A6NKH3 93 aa9.93□□□□□ -0.82
CAPRIN1-216ENST00000534042 TOMM6Q96B49 74 aa9.93□□□□□ -0.82
CAPRIN1-216ENST00000534042 GAGE10A6NGK3 116 aa9.91□□□□□ -0.82
CAPRIN1-216ENST00000534042 SMIM1B2RUZ4 78 aa9.91□□□□□ -0.82
CAPRIN1-216ENST00000534042 PDZD11Q5EBL8 140 aa9.91□□□□□ -0.82
CAPRIN1-216ENST00000534042 ERASQ7Z444 233 aa9.91□□□□□ -0.82
CAPRIN1-216ENST00000534042 COX7B2Q8TF08 81 aa9.91□□□□□ -0.82
CAPRIN1-216ENST00000534042 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
CAPRIN1-216ENST00000534042 TINCRA0A1B0GVN0 87 aa9.89□□□□□ -0.83
CAPRIN1-216ENST00000534042 UBE2AP49459 152 aa9.89□□□□□ -0.83
CAPRIN1-216ENST00000534042 ANAPC11Q9NYG5 84 aa9.89□□□□□ -0.83
CAPRIN1-216ENST00000534042 RAB5BP61020 215 aa9.88□□□□□ -0.83
CAPRIN1-216ENST00000534042 KIAA1644Q3SXP7 199 aa9.88□□□□□ -0.83
CAPRIN1-216ENST00000534042 NKAPP1Q8N9T2 125 aa9.88□□□□□ -0.83
CAPRIN1-216ENST00000534042 IGLV5-37A0A075B6J1 123 aa9.87□□□□□ -0.83
CAPRIN1-216ENST00000534042 IGLV5-45A0A087WSX0 123 aa9.87□□□□□ -0.83
CAPRIN1-216ENST00000534042 ADCYAP1P18509 176 aa9.86□□□□□ -0.83
CAPRIN1-216ENST00000534042 LINC01549A6NIU2 74 aa9.85□□□□□ -0.83
CAPRIN1-216ENST00000534042 SPINK8P0C7L1 97 aa9.85□□□□□ -0.83
CAPRIN1-216ENST00000534042 KRTAP13-2Q52LG2 175 aa9.85□□□□□ -0.83
CAPRIN1-216ENST00000534042 KRTAP13-1Q8IUC0 172 aa9.85□□□□□ -0.83
CAPRIN1-216ENST00000534042 RAB14P61106 215 aa9.84□□□□□ -0.83
CAPRIN1-216ENST00000534042 FAM229BQ4G0N7 80 aa9.84□□□□□ -0.83
CAPRIN1-216ENST00000534042 CST9LQ9H4G1 147 aa9.84□□□□□ -0.83
CAPRIN1-216ENST00000534042 MUC2Q02817 5179 aa9.83□□□□□ -0.84
CAPRIN1-216ENST00000534042 LINC00304Q8N9R0 145 aa9.83□□□□□ -0.84
CAPRIN1-216ENST00000534042 RETNLBQ9BQ08 111 aa9.83□□□□□ -0.84
CAPRIN1-216ENST00000534042 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
CAPRIN1-216ENST00000534042 ATP5LO75964 103 aa9.82□□□□□ -0.84
CAPRIN1-216ENST00000534042 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
CAPRIN1-216ENST00000534042 PMVKQ15126 192 aa9.82□□□□□ -0.84
CAPRIN1-216ENST00000534042 MRPL18Q9H0U6 180 aaKnown RBP9.82□□□□□ -0.84
CAPRIN1-216ENST00000534042 IGKV2D-26A0A0A0MRZ7 120 aa9.81□□□□□ -0.84
CAPRIN1-216ENST00000534042 H3BRM9 83 aa9.81□□□□□ -0.84
CAPRIN1-216ENST00000534042 SCO1O75880 301 aa9.81□□□□□ -0.84
CAPRIN1-216ENST00000534042 KRTAP9-2Q9BYQ4 174 aa9.81□□□□□ -0.84
CAPRIN1-216ENST00000534042 TRAV9-1A0A075B6T8 112 aa9.8□□□□□ -0.84
CAPRIN1-216ENST00000534042 LINC01546A6NGU7 62 aa9.8□□□□□ -0.84
CAPRIN1-216ENST00000534042 PFN2P35080 140 aa9.79□□□□□ -0.84
CAPRIN1-216ENST00000534042 PRLHP81277 87 aa9.78□□□□□ -0.84
CAPRIN1-216ENST00000534042 FAM19A1Q7Z5A9 133 aa9.78□□□□□ -0.84
CAPRIN1-216ENST00000534042 CDIP1Q9H305 208 aa9.78□□□□□ -0.84
CAPRIN1-216ENST00000534042 LCE2AQ5TA79 106 aaPredicted RBP9.77□□□□□ -0.85
CAPRIN1-216ENST00000534042 FA2HQ7L5A8 372 aa9.77□□□□□ -0.85
CAPRIN1-216ENST00000534042 GNB1LQ9BYB4 327 aa9.77□□□□□ -0.85
CAPRIN1-216ENST00000534042 SMCO4Q9NRQ5 59 aa9.77□□□□□ -0.85
CAPRIN1-216ENST00000534042 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
CAPRIN1-216ENST00000534042 VPREB1P12018 145 aa9.76□□□□□ -0.85
CAPRIN1-216ENST00000534042 TPRXLQ17RH7 258 aa9.76□□□□□ -0.85
CAPRIN1-216ENST00000534042 TMEM126AQ9H061 195 aa9.76□□□□□ -0.85
CAPRIN1-216ENST00000534042 TMEM238C9JI98 176 aa9.75□□□□□ -0.85
CAPRIN1-216ENST00000534042 S100PP25815 95 aa9.75□□□□□ -0.85
CAPRIN1-216ENST00000534042 CTAG1AP78358 180 aa9.75□□□□□ -0.85
CAPRIN1-216ENST00000534042 RPL24P83731 157 aaKnown RBP9.75□□□□□ -0.85
CAPRIN1-216ENST00000534042 SND1-IT1Q9HBX3 110 aa9.75□□□□□ -0.85
CAPRIN1-216ENST00000534042 IGLV5-39A0A0G2JS06 123 aa9.74□□□□□ -0.85
CAPRIN1-216ENST00000534042 IGLC3P0DOY3 106 aa9.74□□□□□ -0.85
CAPRIN1-216ENST00000534042 NDUFA6P56556 154 aa9.74□□□□□ -0.85
CAPRIN1-216ENST00000534042 ERG28Q9UKR5 140 aa9.74□□□□□ -0.85
CAPRIN1-216ENST00000534042 M0R378 163 aa9.72□□□□□ -0.85
CAPRIN1-216ENST00000534042 COX17Q14061 63 aa9.72□□□□□ -0.85
CAPRIN1-216ENST00000534042 COX19Q49B96 90 aa9.72□□□□□ -0.85
CAPRIN1-216ENST00000534042 CLLU1Q5K131 121 aa9.72□□□□□ -0.85
CAPRIN1-216ENST00000534042 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
CAPRIN1-216ENST00000534042 PLEKHB2Q96CS7 222 aa9.72□□□□□ -0.85
CAPRIN1-216ENST00000534042 ZNF22P17026 224 aaPredicted RBP9.71□□□□□ -0.86
CAPRIN1-216ENST00000534042 FABP9Q0Z7S8 132 aa9.71□□□□□ -0.86
CAPRIN1-216ENST00000534042 ZNF625Q96I27 306 aaPredicted RBP9.71□□□□□ -0.86
CAPRIN1-216ENST00000534042 TMEM218A2RU14 115 aa9.7□□□□□ -0.86
CAPRIN1-216ENST00000534042 UQCC3Q6UW78 93 aa9.7□□□□□ -0.86
CAPRIN1-216ENST00000534042 C3orf22Q8N5N4 141 aa9.7□□□□□ -0.86
CAPRIN1-216ENST00000534042 FAT4Q6V0I7 4981 aa9.7□□□□□ -0.86
CAPRIN1-216ENST00000534042 HIGD2AQ9BW72 106 aa9.69□□□□□ -0.86
CAPRIN1-216ENST00000534042 PPDPFQ9H3Y8 114 aa9.69□□□□□ -0.86
CAPRIN1-216ENST00000534042 Q8NDZ9 215 aa9.68□□□□□ -0.86
CAPRIN1-216ENST00000534042 SPAG11AQ6PDA7 123 aa9.67□□□□□ -0.86
CAPRIN1-216ENST00000534042 SFTA2Q6UW10 78 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms