RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 EGFEM1PQ0D2K5 195 aa12.46□□□□□ -0.41
PHRF1-205ENST00000533464 C11orf72Q8NBR9 251 aa12.46□□□□□ -0.41
PHRF1-205ENST00000533464 IMUPQ9GZP8 106 aa12.45□□□□□ -0.42
PHRF1-205ENST00000533464 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.44□□□□□ -0.42
PHRF1-205ENST00000533464 USP17L23D6RBM5 183 aa12.44□□□□□ -0.42
PHRF1-205ENST00000533464 FAM19A4Q96LR4 140 aa12.44□□□□□ -0.42
PHRF1-205ENST00000533464 FLNBO75369 2602 aaKnown RBP12.44□□□□□ -0.42
PHRF1-205ENST00000533464 A0A1B0GUV1 79 aa12.44□□□□□ -0.42
PHRF1-205ENST00000533464 C3orf22Q8N5N4 141 aa12.44□□□□□ -0.42
PHRF1-205ENST00000533464 TRBV10-3A0A0K0K1G6 114 aa12.43□□□□□ -0.42
PHRF1-205ENST00000533464 PCSK5Q92824 1860 aa12.43□□□□□ -0.42
PHRF1-205ENST00000533464 C5orf42Q9H799 3197 aa12.42□□□□□ -0.42
PHRF1-205ENST00000533464 PTPRBP23467 1997 aa12.42□□□□□ -0.42
PHRF1-205ENST00000533464 IGKV4-1P06312 121 aa12.42□□□□□ -0.42
PHRF1-205ENST00000533464 NTM-AS1Q6ZSK4 140 aa12.41□□□□□ -0.42
PHRF1-205ENST00000533464 LINC01546A6NGU7 62 aa12.4□□□□□ -0.42
PHRF1-205ENST00000533464 Q8N814 137 aa12.4□□□□□ -0.42
PHRF1-205ENST00000533464 A0A087WYN8 130 aa12.4□□□□□ -0.42
PHRF1-205ENST00000533464 WFDC10BQ8IUB3 73 aa12.39□□□□□ -0.43
PHRF1-205ENST00000533464 C6orf223Q8N319 242 aa12.39□□□□□ -0.43
PHRF1-205ENST00000533464 RANBP2P49792 3224 aaKnown RBP12.39□□□□□ -0.43
PHRF1-205ENST00000533464 SERP2Q8N6R1 65 aa12.38□□□□□ -0.43
PHRF1-205ENST00000533464 FAM240AA0A1B0GVK7 77 aa12.37□□□□□ -0.43
PHRF1-205ENST00000533464 LYPD5Q6UWN5 251 aa12.37□□□□□ -0.43
PHRF1-205ENST00000533464 FAM236DA0A1B0GTK5 79 aa12.35□□□□□ -0.43
PHRF1-205ENST00000533464 FAM236CP0DP71 79 aa12.35□□□□□ -0.43
PHRF1-205ENST00000533464 C7orf33Q8WU49 177 aa12.35□□□□□ -0.43
PHRF1-205ENST00000533464 MUC4Q99102 2169 aa12.34□□□□□ -0.43
PHRF1-205ENST00000533464 LY6G6CO95867 125 aa12.34□□□□□ -0.43
PHRF1-205ENST00000533464 Q9UF83 564 aa12.34□□□□□ -0.43
PHRF1-205ENST00000533464 Q6JHZ5 121 aa12.34□□□□□ -0.43
PHRF1-205ENST00000533464 WFDC13Q8IUB5 93 aa12.33□□□□□ -0.44
PHRF1-205ENST00000533464 FHL3Q13643 280 aa12.33□□□□□ -0.44
PHRF1-205ENST00000533464 M0QXV9 152 aa12.33□□□□□ -0.44
PHRF1-205ENST00000533464 PLAC8L1A1L4L8 177 aa12.33□□□□□ -0.44
PHRF1-205ENST00000533464 HTTP42858 3142 aa12.32□□□□□ -0.44
PHRF1-205ENST00000533464 NDUFC2-KCTD14E9PQ53 114 aa12.32□□□□□ -0.44
PHRF1-205ENST00000533464 CCDC179H3BU77 68 aa12.32□□□□□ -0.44
PHRF1-205ENST00000533464 IGLV5-39A0A0G2JS06 123 aa12.32□□□□□ -0.44
PHRF1-205ENST00000533464 NDUFC2O95298 119 aa12.32□□□□□ -0.44
PHRF1-205ENST00000533464 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
PHRF1-205ENST00000533464 SPINK6Q6UWN8 80 aa12.31□□□□□ -0.44
PHRF1-205ENST00000533464 FAM19A3Q7Z5A8 133 aa12.31□□□□□ -0.44
PHRF1-205ENST00000533464 SNURFQ9Y675 71 aa12.31□□□□□ -0.44
PHRF1-205ENST00000533464 F8P00451 2351 aa12.31□□□□□ -0.44
PHRF1-205ENST00000533464 LINC00474Q9P2X8 69 aa12.31□□□□□ -0.44
PHRF1-205ENST00000533464 CELA1Q9UNI1 258 aa12.31□□□□□ -0.44
PHRF1-205ENST00000533464 IGHV3OR16-9A0A0B4J2B5 98 aa12.3□□□□□ -0.44
PHRF1-205ENST00000533464 COX7CP15954 63 aa12.3□□□□□ -0.44
PHRF1-205ENST00000533464 COL27A1Q8IZC6 1860 aaPredicted RBP12.3□□□□□ -0.44
PHRF1-205ENST00000533464 HRCT1Q6UXD1 115 aa12.3□□□□□ -0.44
PHRF1-205ENST00000533464 IGLV9-49A0A0B4J1Y8 123 aa12.28□□□□□ -0.44
PHRF1-205ENST00000533464 Q6Q795 121 aa12.28□□□□□ -0.44
PHRF1-205ENST00000533464 ZNF706Q9Y5V0 76 aaPredicted RBP12.28□□□□□ -0.44
PHRF1-205ENST00000533464 HECTD1Q9ULT8 2610 aa12.28□□□□□ -0.44
PHRF1-205ENST00000533464 LINC01561Q8N1V8 128 aa12.28□□□□□ -0.44
PHRF1-205ENST00000533464 A8MTW9 85 aa12.27□□□□□ -0.44
PHRF1-205ENST00000533464 A0A087WVE0 104 aa12.27□□□□□ -0.45
PHRF1-205ENST00000533464 KLK9Q2XQG4 91 aa12.27□□□□□ -0.45
PHRF1-205ENST00000533464 NUPR2A6NF83 97 aa12.26□□□□□ -0.45
PHRF1-205ENST00000533464 C2orf48Q96LS8 159 aa12.26□□□□□ -0.45
PHRF1-205ENST00000533464 CHD9Q3L8U1 2897 aa12.26□□□□□ -0.45
PHRF1-205ENST00000533464 C1orf137Q5JT78 98 aa12.26□□□□□ -0.45
PHRF1-205ENST00000533464 Q6ZRU5 148 aa12.25□□□□□ -0.45
PHRF1-205ENST00000533464 MPLKIPQ8TAP9 179 aa12.25□□□□□ -0.45
PHRF1-205ENST00000533464 REG3GQ6UW15 175 aa12.24□□□□□ -0.45
PHRF1-205ENST00000533464 FSHBP01225 129 aa12.22□□□□□ -0.45
PHRF1-205ENST00000533464 LINC00575Q6W349 94 aa12.22□□□□□ -0.45
PHRF1-205ENST00000533464 NDUFC1O43677 76 aa12.21□□□□□ -0.45
PHRF1-205ENST00000533464 BRK1Q8WUW1 75 aa12.21□□□□□ -0.45
PHRF1-205ENST00000533464 IGLV5-45A0A087WSX0 123 aa12.2□□□□□ -0.46
PHRF1-205ENST00000533464 X6R8D5 127 aa12.2□□□□□ -0.46
PHRF1-205ENST00000533464 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
PHRF1-205ENST00000533464 F8WDY8 70 aa12.2□□□□□ -0.46
PHRF1-205ENST00000533464 C10orf25Q5T742 122 aa12.2□□□□□ -0.46
PHRF1-205ENST00000533464 PRR4Q16378 134 aa12.19□□□□□ -0.46
PHRF1-205ENST00000533464 MRPL55Q7Z7F7 128 aaKnown RBP12.19□□□□□ -0.46
PHRF1-205ENST00000533464 FAM30AQ9NZY2 134 aa12.18□□□□□ -0.46
PHRF1-205ENST00000533464 CASC2Q6XLA1 102 aa12.18□□□□□ -0.46
PHRF1-205ENST00000533464 LAMA3Q16787 3333 aa12.18□□□□□ -0.46
PHRF1-205ENST00000533464 LINC00846Q9NV44 126 aa12.16□□□□□ -0.46
PHRF1-205ENST00000533464 ESRGQ1W209 222 aa12.16□□□□□ -0.46
PHRF1-205ENST00000533464 MKI67P46013 3256 aaKnown RBP12.16□□□□□ -0.46
PHRF1-205ENST00000533464 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
PHRF1-205ENST00000533464 Q8N3U1 123 aa12.14□□□□□ -0.47
PHRF1-205ENST00000533464 TRAV7A0A075B6U4 112 aa12.14□□□□□ -0.47
PHRF1-205ENST00000533464 SMCPP49901 116 aaPredicted RBP12.14□□□□□ -0.47
PHRF1-205ENST00000533464 SEC61GP60059 68 aa12.13□□□□□ -0.47
PHRF1-205ENST00000533464 PRYO14603 147 aa12.13□□□□□ -0.47
PHRF1-205ENST00000533464 CDIP1Q9H305 208 aa12.13□□□□□ -0.47
PHRF1-205ENST00000533464 LINC01556Q5JQF7 62 aa12.13□□□□□ -0.47
PHRF1-205ENST00000533464 ATP5EP56381 51 aaPredicted RBP12.12□□□□□ -0.47
PHRF1-205ENST00000533464 MGAM2Q2M2H8 2515 aa12.12□□□□□ -0.47
PHRF1-205ENST00000533464 BPTFQ12830 3046 aa12.12□□□□□ -0.47
PHRF1-205ENST00000533464 Q9BRP9 147 aa12.11□□□□□ -0.47
PHRF1-205ENST00000533464 IGLV5-52A0A0A0MRZ9 124 aa12.1□□□□□ -0.47
PHRF1-205ENST00000533464 Q6ZVQ6 151 aa12.1□□□□□ -0.47
PHRF1-205ENST00000533464 CENPEQ02224 2701 aa12.1□□□□□ -0.47
PHRF1-205ENST00000533464 A0A087WSZ3 146 aa12.09□□□□□ -0.47
PHRF1-205ENST00000533464 C6orf48Q9UBA6 75 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms