RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 KIR2DL5BQ8NHK3 375 aa11.54□□□□□ -0.56
CTSB-228ENST00000533455 LINC01006Q8NI28 216 aa11.54□□□□□ -0.56
CTSB-228ENST00000533455 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
CTSB-228ENST00000533455 OR13C6PQ8NH95 151 aa11.53□□□□□ -0.56
CTSB-228ENST00000533455 C3orf56Q8N813 242 aa11.53□□□□□ -0.56
CTSB-228ENST00000533455 LINC00167Q96N53 147 aa11.53□□□□□ -0.56
CTSB-228ENST00000533455 ATOX1O00244 68 aa11.52□□□□□ -0.56
CTSB-228ENST00000533455 COX7CP15954 63 aa11.52□□□□□ -0.56
CTSB-228ENST00000533455 SS18Q15532 418 aa11.52□□□□□ -0.56
CTSB-228ENST00000533455 C2orf48Q96LS8 159 aa11.52□□□□□ -0.57
CTSB-228ENST00000533455 ORMDL1Q9P0S3 153 aa11.52□□□□□ -0.57
CTSB-228ENST00000533455 A0A1B0GX51 115 aa11.51□□□□□ -0.57
CTSB-228ENST00000533455 LINC00846Q9NV44 126 aa11.51□□□□□ -0.57
CTSB-228ENST00000533455 RNASE1P07998 156 aaKnown RBP11.5□□□□□ -0.57
CTSB-228ENST00000533455 SETXQ7Z333 2677 aaKnown RBP11.5□□□□□ -0.57
CTSB-228ENST00000533455 NCR3O14931 201 aa11.5□□□□□ -0.57
CTSB-228ENST00000533455 GYPEP15421 78 aa11.5□□□□□ -0.57
CTSB-228ENST00000533455 XCL1P47992 114 aa11.5□□□□□ -0.57
CTSB-228ENST00000533455 WFDC11Q8NEX6 87 aa11.5□□□□□ -0.57
CTSB-228ENST00000533455 C11orf68Q9H3H3 251 aaKnown RBP11.5□□□□□ -0.57
CTSB-228ENST00000533455 TLN2Q9Y4G6 2542 aa11.49□□□□□ -0.57
CTSB-228ENST00000533455 SLPIP03973 132 aa11.48□□□□□ -0.57
CTSB-228ENST00000533455 DEFB130BP0DP73 79 aa11.48□□□□□ -0.57
CTSB-228ENST00000533455 DEFB130AP0DP74 79 aa11.48□□□□□ -0.57
CTSB-228ENST00000533455 NANOS2P60321 138 aaKnown RBP11.48□□□□□ -0.57
CTSB-228ENST00000533455 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
CTSB-228ENST00000533455 J3QKU1 62 aa11.47□□□□□ -0.57
CTSB-228ENST00000533455 NDUFC2O95298 119 aa11.47□□□□□ -0.57
CTSB-228ENST00000533455 GCN1Q92616 2671 aaKnown RBP11.47□□□□□ -0.57
CTSB-228ENST00000533455 CRYGAP11844 174 aa11.47□□□□□ -0.57
CTSB-228ENST00000533455 JMJD1CQ15652 2540 aa11.46□□□□□ -0.57
CTSB-228ENST00000533455 CCKP06307 115 aa11.46□□□□□ -0.57
CTSB-228ENST00000533455 IGKV3D-7A0A0C4DH55 119 aa11.45□□□□□ -0.58
CTSB-228ENST00000533455 CCDC168Q8NDH2 2452 aa11.45□□□□□ -0.58
CTSB-228ENST00000533455 ITPR3Q14573 2671 aa11.45□□□□□ -0.58
CTSB-228ENST00000533455 COX17Q14061 63 aa11.45□□□□□ -0.58
CTSB-228ENST00000533455 KIAA0087Q14695 138 aa11.45□□□□□ -0.58
CTSB-228ENST00000533455 SONP18583 2426 aaKnown RBP11.44□□□□□ -0.58
CTSB-228ENST00000533455 Q8N814 137 aa11.44□□□□□ -0.58
CTSB-228ENST00000533455 PRO0255Q9UI72 69 aa11.44□□□□□ -0.58
CTSB-228ENST00000533455 JMJD7-PLA2G4BH0Y9G9 81 aa11.43□□□□□ -0.58
CTSB-228ENST00000533455 KRTAP1-1Q07627 177 aa11.43□□□□□ -0.58
CTSB-228ENST00000533455 ITPR2Q14571 2701 aa11.43□□□□□ -0.58
CTSB-228ENST00000533455 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
CTSB-228ENST00000533455 X6R8D5 127 aa11.43□□□□□ -0.58
CTSB-228ENST00000533455 CD164L2Q6UWJ8 174 aa11.42□□□□□ -0.58
CTSB-228ENST00000533455 IGHV4-28A0A0C4DH34 117 aa11.42□□□□□ -0.58
CTSB-228ENST00000533455 SMIM9A6NGZ8 99 aa11.42□□□□□ -0.58
CTSB-228ENST00000533455 TMEM256-PLSCR3K7ERE1 68 aa11.41□□□□□ -0.58
CTSB-228ENST00000533455 S100A7L2Q5SY68 101 aa11.41□□□□□ -0.58
CTSB-228ENST00000533455 CFAP161Q6P656 301 aa11.41□□□□□ -0.58
CTSB-228ENST00000533455 PDZD2O15018 2839 aa11.4□□□□□ -0.59
CTSB-228ENST00000533455 UNC79Q9P2D8 2635 aa11.39□□□□□ -0.59
CTSB-228ENST00000533455 PRR3P79522 188 aaKnown RBP11.39□□□□□ -0.59
CTSB-228ENST00000533455 ATP5EP2Q5VTU8 51 aa11.39□□□□□ -0.59
CTSB-228ENST00000533455 SERP2Q8N6R1 65 aa11.39□□□□□ -0.59
CTSB-228ENST00000533455 A0A087WVE0 104 aa11.38□□□□□ -0.59
CTSB-228ENST00000533455 LINC00269Q8N2A0 174 aa11.38□□□□□ -0.59
CTSB-228ENST00000533455 CHCHD10Q8WYQ3 142 aaPredicted RBP11.38□□□□□ -0.59
CTSB-228ENST00000533455 HECTD1Q9ULT8 2610 aa11.38□□□□□ -0.59
CTSB-228ENST00000533455 NF1P21359 2839 aa11.38□□□□□ -0.59
CTSB-228ENST00000533455 A0A096LPF7 62 aa11.37□□□□□ -0.59
CTSB-228ENST00000533455 USP17L23D6RBM5 183 aa11.37□□□□□ -0.59
CTSB-228ENST00000533455 LYRM9A8MSI8 78 aa11.36□□□□□ -0.59
CTSB-228ENST00000533455 hADV29S1A0JD25 119 aa11.36□□□□□ -0.59
CTSB-228ENST00000533455 LYPD5Q6UWN5 251 aa11.36□□□□□ -0.59
CTSB-228ENST00000533455 UPK3BQ9BT76 320 aa11.36□□□□□ -0.59
CTSB-228ENST00000533455 FLNAP21333 2647 aaKnown RBP11.36□□□□□ -0.59
CTSB-228ENST00000533455 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
CTSB-228ENST00000533455 HILS1P60008 231 aa11.35□□□□□ -0.59
CTSB-228ENST00000533455 REG3AQ06141 175 aa11.35□□□□□ -0.59
CTSB-228ENST00000533455 MUC7Q8TAX7 377 aa11.35□□□□□ -0.59
CTSB-228ENST00000533455 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
CTSB-228ENST00000533455 Q8NDZ9 215 aa11.34□□□□□ -0.59
CTSB-228ENST00000533455 C6orf99Q4VX62 202 aa11.33□□□□□ -0.6
CTSB-228ENST00000533455 FASNP49327 2511 aaKnown RBP11.33□□□□□ -0.6
CTSB-228ENST00000533455 J3KT08 172 aa11.33□□□□□ -0.6
CTSB-228ENST00000533455 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
CTSB-228ENST00000533455 LINC00575Q6W349 94 aa11.33□□□□□ -0.6
CTSB-228ENST00000533455 CUBNO60494 3623 aa11.32□□□□□ -0.6
CTSB-228ENST00000533455 NIPBLQ6KC79 2804 aaeCLIP11.32□□□□□ -0.65e-6■□□□□ 8.1
CTSB-228ENST00000533455 ANGP03950 147 aaKnown RBP11.32□□□□□ -0.6
CTSB-228ENST00000533455 CYSTM1Q9H1C7 97 aa11.32□□□□□ -0.6
CTSB-228ENST00000533455 IGLV10-54A0A075B6I4 117 aa11.31□□□□□ -0.6
CTSB-228ENST00000533455 TRBV10-3A0A0K0K1G6 114 aa11.31□□□□□ -0.6
CTSB-228ENST00000533455 KRTAP10-3P60369 221 aa11.31□□□□□ -0.6
CTSB-228ENST00000533455 RPS28P62857 69 aaKnown RBP11.31□□□□□ -0.6
CTSB-228ENST00000533455 Q8N3U1 123 aa11.31□□□□□ -0.6
CTSB-228ENST00000533455 TMEM258P61165 79 aa11.3□□□□□ -0.6
CTSB-228ENST00000533455 ACANP16112 2415 aa11.3□□□□□ -0.6
CTSB-228ENST00000533455 ZNF561-AS1K7EIQ3 104 aa11.28□□□□□ -0.6
CTSB-228ENST00000533455 SETD2Q9BYW2 2564 aaPredicted RBP11.28□□□□□ -0.6
CTSB-228ENST00000533455 LOC110117498A0A087WWA1 95 aa11.28□□□□□ -0.6
CTSB-228ENST00000533455 A0A0J9YWU9 116 aa11.28□□□□□ -0.6
CTSB-228ENST00000533455 IGHV4-30-4P0DP06 118 aa11.28□□□□□ -0.6
CTSB-228ENST00000533455 Q6ZQT0 140 aa11.28□□□□□ -0.6
CTSB-228ENST00000533455 UBL5Q9BZL1 73 aa11.28□□□□□ -0.6
CTSB-228ENST00000533455 SPAG11BQ08648 103 aa11.27□□□□□ -0.61
CTSB-228ENST00000533455 C6orf223Q8N319 242 aa11.27□□□□□ -0.61
CTSB-228ENST00000533455 NOTCH2Q04721 2471 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms