RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 CKS1BP61024 79 aa4.38□□□□□ -1.71
NXF1-215ENST00000533440 RIGQ13278 110 aa4.38□□□□□ -1.71
NXF1-215ENST00000533440 RGS21Q2M5E4 152 aa4.38□□□□□ -1.71
NXF1-215ENST00000533440 FAM104BQ5XKR9 115 aa4.38□□□□□ -1.71
NXF1-215ENST00000533440 Q8IZM0 81 aa4.38□□□□□ -1.71
NXF1-215ENST00000533440 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
NXF1-215ENST00000533440 SMIM2Q9BVW6 85 aa4.38□□□□□ -1.71
NXF1-215ENST00000533440 PYGO1Q9Y3Y4 419 aa4.38□□□□□ -1.71
NXF1-215ENST00000533440 IGLV5-37A0A075B6J1 123 aa4.37□□□□□ -1.71
NXF1-215ENST00000533440 GAGE10A6NGK3 116 aa4.37□□□□□ -1.71
NXF1-215ENST00000533440 TMEM250H0YL14 139 aa4.37□□□□□ -1.71
NXF1-215ENST00000533440 PRSS2P07478 247 aa4.37□□□□□ -1.71
NXF1-215ENST00000533440 PNRC1Q12796 327 aaPredicted RBP4.37□□□□□ -1.71
NXF1-215ENST00000533440 C6orf226Q5I0X4 101 aa4.37□□□□□ -1.71
NXF1-215ENST00000533440 Q6ZN92 141 aa4.37□□□□□ -1.71
NXF1-215ENST00000533440 TOMM7Q9P0U1 55 aa4.37□□□□□ -1.71
NXF1-215ENST00000533440 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
NXF1-215ENST00000533440 F8VRH5 84 aa4.36□□□□□ -1.71
NXF1-215ENST00000533440 TNFRSF6BO95407 300 aa4.36□□□□□ -1.71
NXF1-215ENST00000533440 IFI27P40305 119 aaPredicted RBP4.36□□□□□ -1.71
NXF1-215ENST00000533440 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
NXF1-215ENST00000533440 PLEKHB2Q96CS7 222 aa4.36□□□□□ -1.71
NXF1-215ENST00000533440 TMEM141Q96I45 108 aa4.36□□□□□ -1.71
NXF1-215ENST00000533440 OSTCQ9NRP0 149 aa4.36□□□□□ -1.71
NXF1-215ENST00000533440 FLGP20930 4061 aaPredicted RBP4.36□□□□□ -1.71
NXF1-215ENST00000533440 CKS2P33552 79 aa4.35□□□□□ -1.71
NXF1-215ENST00000533440 LINC01551Q86U37 167 aa4.35□□□□□ -1.71
NXF1-215ENST00000533440 ALKBH7Q9BT30 221 aaPredicted RBP4.35□□□□□ -1.71
NXF1-215ENST00000533440 EIF5A2Q9GZV4 153 aaKnown RBP4.35□□□□□ -1.71
NXF1-215ENST00000533440 V9GYV3 84 aa4.35□□□□□ -1.71
NXF1-215ENST00000533440 PRLHP81277 87 aa4.34□□□□□ -1.71
NXF1-215ENST00000533440 TEX43Q6ZNM6 134 aa4.34□□□□□ -1.71
NXF1-215ENST00000533440 FAM19A3Q7Z5A8 133 aa4.34□□□□□ -1.71
NXF1-215ENST00000533440 AMELXQ99217 191 aa4.34□□□□□ -1.71
NXF1-215ENST00000533440 KRTAP4-12Q9BQ66 201 aa4.34□□□□□ -1.71
NXF1-215ENST00000533440 IGKV2-28A0A075B6P5 120 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 A0A1B0GVG6 124 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 D6R8Y8 96 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 NPYP01303 97 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 IGKV2D-28P01615 120 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 CXCL5P42830 114 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 ZC2HC1BQ5TFG8 222 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 FAM19A1Q7Z5A9 133 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 NKAPP1Q8N9T2 125 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 C2orf88Q9BSF0 95 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 NAT8BQ9UHF3 227 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
NXF1-215ENST00000533440 SCO1O75880 301 aa4.32□□□□□ -1.72
NXF1-215ENST00000533440 SPINK1P00995 79 aa4.32□□□□□ -1.72
NXF1-215ENST00000533440 FAM74A3Q4VXF1 159 aa4.32□□□□□ -1.72
NXF1-215ENST00000533440 C2orf66Q6UXQ4 117 aa4.32□□□□□ -1.72
NXF1-215ENST00000533440 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
NXF1-215ENST00000533440 DAND5Q8N907 189 aa4.32□□□□□ -1.72
NXF1-215ENST00000533440 SMIM7Q9BQ49 75 aa4.32□□□□□ -1.72
NXF1-215ENST00000533440 GNB1LQ9BYB4 327 aa4.32□□□□□ -1.72
NXF1-215ENST00000533440 TMEM126AQ9H061 195 aa4.32□□□□□ -1.72
NXF1-215ENST00000533440 A0A1B0GW15 77 aa4.31□□□□□ -1.72
NXF1-215ENST00000533440 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
NXF1-215ENST00000533440 RAB5AP20339 215 aa4.31□□□□□ -1.72
NXF1-215ENST00000533440 CEBPGP53567 150 aa4.31□□□□□ -1.72
NXF1-215ENST00000533440 CBLN2Q8IUK8 224 aa4.31□□□□□ -1.72
NXF1-215ENST00000533440 Q8NBF4 154 aa4.31□□□□□ -1.72
NXF1-215ENST00000533440 SPRR4Q96PI1 79 aa4.31□□□□□ -1.72
NXF1-215ENST00000533440 CDKN2A-AS1Q9UH64 79 aa4.31□□□□□ -1.72
NXF1-215ENST00000533440 USH2AO75445 5202 aa4.31□□□□□ -1.72
NXF1-215ENST00000533440 SMIM27A0A1W2PRY6 76 aa4.3□□□□□ -1.72
NXF1-215ENST00000533440 PRSS47A8MTI9 375 aa4.3□□□□□ -1.72
NXF1-215ENST00000533440 M0R378 163 aa4.3□□□□□ -1.72
NXF1-215ENST00000533440 PPBPP02775 128 aa4.3□□□□□ -1.72
NXF1-215ENST00000533440 NPSP0C0P6 89 aa4.3□□□□□ -1.72
NXF1-215ENST00000533440 HERVK_113P63121 156 aa4.3□□□□□ -1.72
NXF1-215ENST00000533440 VCX2Q9H322 139 aa4.3□□□□□ -1.72
NXF1-215ENST00000533440 SEC11AP67812 179 aa4.29□□□□□ -1.72
NXF1-215ENST00000533440 SLC51BQ86UW2 128 aa4.29□□□□□ -1.72
NXF1-215ENST00000533440 NDUFA12Q9UI09 145 aa4.29□□□□□ -1.72
NXF1-215ENST00000533440 CYSLTR1Q9Y271 337 aa4.29□□□□□ -1.72
NXF1-215ENST00000533440 A0A1B0GXF2 115 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 IGIPA6NJ69 53 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 SMIM1B2RUZ4 78 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 F8W036 122 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 VPREB1P12018 145 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 RAB5BP61020 215 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 RPS29P62273 56 aaKnown RBP4.28□□□□□ -1.72
NXF1-215ENST00000533440 PDZD11Q5EBL8 140 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 ORMDL3Q8N138 153 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 Q8N377 158 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 FAM19A2Q8N3H0 131 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 COX7B2Q8TF08 81 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 HIGD2AQ9BW72 106 aa4.28□□□□□ -1.72
NXF1-215ENST00000533440 hCG_2014768A0A024R1R8 64 aa4.27□□□□□ -1.73
NXF1-215ENST00000533440 S100A8P05109 93 aa4.27□□□□□ -1.73
NXF1-215ENST00000533440 RPL23P62829 140 aaKnown RBP4.27□□□□□ -1.73
NXF1-215ENST00000533440 BLOC1S1P78537 153 aa4.27□□□□□ -1.73
NXF1-215ENST00000533440 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
NXF1-215ENST00000533440 MRPL54Q6P161 138 aaKnown RBP4.27□□□□□ -1.73
NXF1-215ENST00000533440 TMEM136Q6ZRR5 245 aa4.27□□□□□ -1.73
NXF1-215ENST00000533440 TCTE3Q8IZS6 198 aa4.27□□□□□ -1.73
NXF1-215ENST00000533440 PRELID3AQ96N28 172 aa4.27□□□□□ -1.73
NXF1-215ENST00000533440 GEMIN7Q9H840 131 aaKnown RBP4.27□□□□□ -1.73
NXF1-215ENST00000533440 IGLV8-61A0A075B6I0 122 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms