RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 NDUFA5Q16718 116 aa18.73■□□□□ 0.59
SSSCA1-207ENST00000533115 SPINK6Q6UWN8 80 aa18.73■□□□□ 0.59
SSSCA1-207ENST00000533115 TRAPPC1Q9Y5R8 145 aa18.73■□□□□ 0.59
SSSCA1-207ENST00000533115 FAM168BA1KXE4 195 aa18.72■□□□□ 0.59
SSSCA1-207ENST00000533115 CKS1BP61024 79 aa18.72■□□□□ 0.59
SSSCA1-207ENST00000533115 SVBPQ8N300 66 aa18.72■□□□□ 0.59
SSSCA1-207ENST00000533115 NDUFC2-KCTD14E9PQ53 114 aa18.71■□□□□ 0.59
SSSCA1-207ENST00000533115 TINCRA0A1B0GVN0 87 aa18.7■□□□□ 0.58
SSSCA1-207ENST00000533115 SRSF9Q13242 221 aaKnown RBP eCLIP18.7■□□□□ 0.58
SSSCA1-207ENST00000533115 CST9LQ9H4G1 147 aa18.7■□□□□ 0.58
SSSCA1-207ENST00000533115 PSORS1C2Q9UIG4 136 aa18.7■□□□□ 0.58
SSSCA1-207ENST00000533115 LINC00469Q8N7U9 141 aa18.69■□□□□ 0.58
SSSCA1-207ENST00000533115 FAM19A5Q7Z5A7 132 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-207ENST00000533115 PMVKQ15126 192 aa18.66■□□□□ 0.58
SSSCA1-207ENST00000533115 C18orf32Q8TCD1 76 aa18.66■□□□□ 0.58
SSSCA1-207ENST00000533115 HMCN2Q8NDA2 5059 aa18.66■□□□□ 0.58
SSSCA1-207ENST00000533115 IGLV5-45A0A087WSX0 123 aa18.65■□□□□ 0.58
SSSCA1-207ENST00000533115 LINC01600Q96MT4 127 aa18.65■□□□□ 0.58
SSSCA1-207ENST00000533115 TNXBP22105 4242 aa18.64■□□□□ 0.58
SSSCA1-207ENST00000533115 SMIM1B2RUZ4 78 aa18.64■□□□□ 0.57
SSSCA1-207ENST00000533115 URB1-AS1Q96HZ7 61 aa18.64■□□□□ 0.57
SSSCA1-207ENST00000533115 LINC00614P0C842 121 aa18.63■□□□□ 0.57
SSSCA1-207ENST00000533115 C1orf137Q5JT78 98 aa18.63■□□□□ 0.57
SSSCA1-207ENST00000533115 C9orf129Q5T035 196 aaKnown RBP18.63■□□□□ 0.57
SSSCA1-207ENST00000533115 REG3GQ6UW15 175 aa18.63■□□□□ 0.57
SSSCA1-207ENST00000533115 KRTAP7-1Q8IUC3 87 aa18.63■□□□□ 0.57
SSSCA1-207ENST00000533115 F8VRH5 84 aa18.62■□□□□ 0.57
SSSCA1-207ENST00000533115 PDZD11Q5EBL8 140 aa18.62■□□□□ 0.57
SSSCA1-207ENST00000533115 A0A096LNJ9 63 aa18.61■□□□□ 0.57
SSSCA1-207ENST00000533115 CXCL5P42830 114 aa18.61■□□□□ 0.57
SSSCA1-207ENST00000533115 M0QXV9 152 aa18.59■□□□□ 0.57
SSSCA1-207ENST00000533115 COX7B2Q8TF08 81 aa18.59■□□□□ 0.57
SSSCA1-207ENST00000533115 KRTAP11-1Q8IUC1 163 aa18.58■□□□□ 0.56
SSSCA1-207ENST00000533115 HBDP02042 147 aa18.56■□□□□ 0.56
SSSCA1-207ENST00000533115 SPINK8P0C7L1 97 aa18.56■□□□□ 0.56
SSSCA1-207ENST00000533115 YPEL4Q96NS1 127 aa18.56■□□□□ 0.56
SSSCA1-207ENST00000533115 RAB5BP61020 215 aa18.55■□□□□ 0.56
SSSCA1-207ENST00000533115 PMCHL1Q16048 86 aa18.55■□□□□ 0.56
SSSCA1-207ENST00000533115 PLA2G2DQ9UNK4 145 aa18.55■□□□□ 0.56
SSSCA1-207ENST00000533115 NDUFA6P56556 154 aa18.54■□□□□ 0.56
SSSCA1-207ENST00000533115 H3BRM9 83 aa18.53■□□□□ 0.56
SSSCA1-207ENST00000533115 IGLV7-43P04211 117 aa18.53■□□□□ 0.56
SSSCA1-207ENST00000533115 IGLC3P0DOY3 106 aa18.53■□□□□ 0.56
SSSCA1-207ENST00000533115 UBE2BP63146 152 aa18.53■□□□□ 0.56
SSSCA1-207ENST00000533115 XAGE1AQ9HD64 81 aa18.52■□□□□ 0.56
SSSCA1-207ENST00000533115 ATP5LO75964 103 aa18.48■□□□□ 0.55
SSSCA1-207ENST00000533115 KRTAP10-8P60410 259 aa18.48■□□□□ 0.55
SSSCA1-207ENST00000533115 C22orf24Q9Y442 160 aa18.46■□□□□ 0.55
SSSCA1-207ENST00000533115 ZNF22P17026 224 aaPredicted RBP18.45■□□□□ 0.54
SSSCA1-207ENST00000533115 DIRC1Q969H9 104 aa18.45■□□□□ 0.54
SSSCA1-207ENST00000533115 CBLN2Q8IUK8 224 aa18.44■□□□□ 0.54
SSSCA1-207ENST00000533115 IGLV5-39A0A0G2JS06 123 aa18.43■□□□□ 0.54
SSSCA1-207ENST00000533115 BAGE3Q86Y29 109 aa18.43■□□□□ 0.54
SSSCA1-207ENST00000533115 ODF1Q14990 250 aa18.42■□□□□ 0.54
SSSCA1-207ENST00000533115 LBHQ53QV2 105 aaPredicted RBP18.42■□□□□ 0.54
SSSCA1-207ENST00000533115 CHCHD1Q96BP2 118 aaKnown RBP18.42■□□□□ 0.54
SSSCA1-207ENST00000533115 H0Y9J4 135 aa18.39■□□□□ 0.53
SSSCA1-207ENST00000533115 TP73-AS1Q9UF72 201 aa18.39■□□□□ 0.53
SSSCA1-207ENST00000533115 C11orf86A6NJI1 115 aa18.38■□□□□ 0.53
SSSCA1-207ENST00000533115 MRPL55Q7Z7F7 128 aaKnown RBP18.36■□□□□ 0.53
SSSCA1-207ENST00000533115 TMEM170BQ5T4T1 132 aa18.35■□□□□ 0.53
SSSCA1-207ENST00000533115 CHTOPQ9Y3Y2 248 aaKnown RBP18.35■□□□□ 0.53
SSSCA1-207ENST00000533115 SLC7A5P1Q8MH63 180 aa18.34■□□□□ 0.53
SSSCA1-207ENST00000533115 NUPR1O60356 82 aa18.33■□□□□ 0.52
SSSCA1-207ENST00000533115 IFI27L1Q96BM0 104 aa18.32■□□□□ 0.52
SSSCA1-207ENST00000533115 TRAV12-1A0A0B4J245 112 aa18.31■□□□□ 0.52
SSSCA1-207ENST00000533115 PFN2P35080 140 aa18.31■□□□□ 0.52
SSSCA1-207ENST00000533115 TRGC2P03986 189 aa18.3■□□□□ 0.52
SSSCA1-207ENST00000533115 LINC00167Q96N53 147 aa18.29■□□□□ 0.52
SSSCA1-207ENST00000533115 IGLV5-37A0A075B6J1 123 aa18.28■□□□□ 0.52
SSSCA1-207ENST00000533115 HSBP1O75506 76 aa18.28■□□□□ 0.52
SSSCA1-207ENST00000533115 ERG28Q9UKR5 140 aa18.28■□□□□ 0.52
SSSCA1-207ENST00000533115 ZNF861PO60384 105 aa18.27■□□□□ 0.52
SSSCA1-207ENST00000533115 SFTA2Q6UW10 78 aa18.26■□□□□ 0.51
SSSCA1-207ENST00000533115 FAM19A2Q8N3H0 131 aa18.26■□□□□ 0.51
SSSCA1-207ENST00000533115 PRR26Q8N8Z3 221 aa18.26■□□□□ 0.51
SSSCA1-207ENST00000533115 UBR4Q5T4S7 5183 aa18.26■□□□□ 0.51
SSSCA1-207ENST00000533115 COX17Q14061 63 aa18.25■□□□□ 0.51
SSSCA1-207ENST00000533115 NKAPP1Q8N9T2 125 aa18.25■□□□□ 0.51
SSSCA1-207ENST00000533115 ZNF625Q96I27 306 aaPredicted RBP18.25■□□□□ 0.51
SSSCA1-207ENST00000533115 RPL37AP8A6NKH3 93 aa18.24■□□□□ 0.51
SSSCA1-207ENST00000533115 KRTAP1-4P0C5Y4 121 aa18.24■□□□□ 0.51
SSSCA1-207ENST00000533115 TMEM223A0PJW6 202 aa18.23■□□□□ 0.51
SSSCA1-207ENST00000533115 GAGE10A6NGK3 116 aa18.23■□□□□ 0.51
SSSCA1-207ENST00000533115 SND1-IT1Q9HBX3 110 aa18.22■□□□□ 0.51
SSSCA1-207ENST00000533115 BCE1O60756 84 aa18.21■□□□□ 0.51
SSSCA1-207ENST00000533115 IGLV1-50A0A075B6I6 118 aa18.19■□□□□ 0.5
SSSCA1-207ENST00000533115 SERF1AO75920 110 aa18.17■□□□□ 0.5
SSSCA1-207ENST00000533115 RPL28P46779 137 aaKnown RBP18.17■□□□□ 0.5
SSSCA1-207ENST00000533115 LINC00310P59036 64 aa18.17■□□□□ 0.5
SSSCA1-207ENST00000533115 COLCA2A8K830 154 aa18.16■□□□□ 0.5
SSSCA1-207ENST00000533115 SCO1O75880 301 aa18.15■□□□□ 0.5
SSSCA1-207ENST00000533115 VPREB1P12018 145 aa18.15■□□□□ 0.5
SSSCA1-207ENST00000533115 LEPROTL1O95214 131 aa18.14■□□□□ 0.49
SSSCA1-207ENST00000533115 H0Y8G0 127 aa18.13■□□□□ 0.49
SSSCA1-207ENST00000533115 RPL24P83731 157 aaKnown RBP18.13■□□□□ 0.49
SSSCA1-207ENST00000533115 IGKV2-28A0A075B6P5 120 aa18.12■□□□□ 0.49
SSSCA1-207ENST00000533115 IGKV2D-28P01615 120 aa18.12■□□□□ 0.49
SSSCA1-207ENST00000533115 LINC00158P58513 81 aa18.11■□□□□ 0.49
SSSCA1-207ENST00000533115 RPL13AP40429 203 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms