RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 FNDC1Q4ZHG4 1894 aaPredicted RBP5.79□□□□□ -1.48
CTNND1-231ENST00000532463 C11orf72Q8NBR9 251 aa5.79□□□□□ -1.48
CTNND1-231ENST00000532463 AMELXQ99217 191 aa5.79□□□□□ -1.48
CTNND1-231ENST00000532463 KIAA0087Q14695 138 aa5.79□□□□□ -1.48
CTNND1-231ENST00000532463 IGFL2Q6UWQ7 119 aa5.79□□□□□ -1.48
CTNND1-231ENST00000532463 COA5Q86WW8 74 aa5.79□□□□□ -1.48
CTNND1-231ENST00000532463 ELOF1P60002 83 aaKnown RBP5.78□□□□□ -1.48
CTNND1-231ENST00000532463 EPM2AB3EWF7 344 aa5.78□□□□□ -1.48
CTNND1-231ENST00000532463 PIP4P1Q86T03 277 aa5.78□□□□□ -1.48
CTNND1-231ENST00000532463 SPACA4Q8TDM5 124 aa5.78□□□□□ -1.48
CTNND1-231ENST00000532463 TICRRQ7Z2Z1 1910 aa5.78□□□□□ -1.48
CTNND1-231ENST00000532463 LMO4P61968 165 aa5.77□□□□□ -1.48
CTNND1-231ENST00000532463 ADORA2A-AS1P86434 159 aa5.77□□□□□ -1.48
CTNND1-231ENST00000532463 C1orf229Q6ZS94 237 aaPredicted RBP5.77□□□□□ -1.48
CTNND1-231ENST00000532463 DENND4CQ5VZ89 1909 aa5.77□□□□□ -1.49
CTNND1-231ENST00000532463 C9orf129Q5T035 196 aaKnown RBP5.77□□□□□ -1.49
CTNND1-231ENST00000532463 FRMPD3Q5JV73 1810 aa5.77□□□□□ -1.49
CTNND1-231ENST00000532463 IGLV4-60A0A075B6I1 120 aa5.77□□□□□ -1.49
CTNND1-231ENST00000532463 A8MTW9 85 aa5.77□□□□□ -1.49
CTNND1-231ENST00000532463 LINC00313P59037 77 aa5.77□□□□□ -1.49
CTNND1-231ENST00000532463 CSNK1G2-AS1Q8NCQ2 148 aa5.77□□□□□ -1.49
CTNND1-231ENST00000532463 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
CTNND1-231ENST00000532463 LINC01006Q8NI28 216 aa5.76□□□□□ -1.49
CTNND1-231ENST00000532463 NHLRC4P0CG21 123 aaPredicted RBP5.76□□□□□ -1.49
CTNND1-231ENST00000532463 FAM208BQ5VWN6 2430 aa5.76□□□□□ -1.49
CTNND1-231ENST00000532463 TM2D3Q9BRN9 247 aa5.76□□□□□ -1.49
CTNND1-231ENST00000532463 A0A0A0MQY5 61 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 WISP2O76076 250 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 FAM19A4Q96LR4 140 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 THSD7BQ9C0I4 1608 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 HIVEP2P31629 2446 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 PSMG3-AS1Q96PY0 264 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 KIAA1671Q9BY89 1806 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 A0A1B0GUV1 79 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 FBXL19-AS1Q494R0 122 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 URB1-AS1Q96HZ7 61 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 LINC00310P59036 64 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 CRIP3Q6Q6R5 217 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 C22orf24Q9Y442 160 aa5.75□□□□□ -1.49
CTNND1-231ENST00000532463 FAM229AH3BQW9 127 aa5.74□□□□□ -1.49
CTNND1-231ENST00000532463 MOBPQ13875 183 aa5.74□□□□□ -1.49
CTNND1-231ENST00000532463 NOTCH4Q99466 2003 aa5.74□□□□□ -1.49
CTNND1-231ENST00000532463 Q8NBF4 154 aa5.74□□□□□ -1.49
CTNND1-231ENST00000532463 FHL2Q14192 279 aa5.73□□□□□ -1.49
CTNND1-231ENST00000532463 TTC28Q96AY4 2481 aa5.73□□□□□ -1.49
CTNND1-231ENST00000532463 ANAPC1Q9H1A4 1944 aa5.73□□□□□ -1.49
CTNND1-231ENST00000532463 COL4A3Q01955 1670 aa5.73□□□□□ -1.49
CTNND1-231ENST00000532463 ZNF580Q9UK33 172 aa5.73□□□□□ -1.49
CTNND1-231ENST00000532463 TANC2Q9HCD6 1990 aa5.73□□□□□ -1.49
CTNND1-231ENST00000532463 LOC110117498A0A087WWA1 95 aa5.73□□□□□ -1.49
CTNND1-231ENST00000532463 Q6ZRU5 148 aa5.72□□□□□ -1.49
CTNND1-231ENST00000532463 LINC00336Q6ZUF6 198 aa5.72□□□□□ -1.49
CTNND1-231ENST00000532463 NCOA6Q14686 2063 aaPredicted RBP5.72□□□□□ -1.49
CTNND1-231ENST00000532463 Q6ZQT0 140 aa5.72□□□□□ -1.49
CTNND1-231ENST00000532463 C1orf134Q5TEV5 83 aa5.71□□□□□ -1.49
CTNND1-231ENST00000532463 H3BS24 57 aa5.71□□□□□ -1.5
CTNND1-231ENST00000532463 C11orf71Q6IPW1 123 aa5.71□□□□□ -1.5
CTNND1-231ENST00000532463 C10orf99Q6UWK7 81 aa5.71□□□□□ -1.5
CTNND1-231ENST00000532463 LYPD5Q6UWN5 251 aa5.71□□□□□ -1.5
CTNND1-231ENST00000532463 PRR15Q8IV56 129 aa5.71□□□□□ -1.5
CTNND1-231ENST00000532463 INAFM1C9JVW0 142 aa5.7□□□□□ -1.5
CTNND1-231ENST00000532463 ZFHX2Q9C0A1 2572 aaPredicted RBP5.7□□□□□ -1.5
CTNND1-231ENST00000532463 PLXNB3Q9ULL4 1909 aa5.7□□□□□ -1.5
CTNND1-231ENST00000532463 KIAA1549Q9HCM3 1950 aa5.7□□□□□ -1.5
CTNND1-231ENST00000532463 MUC6Q6W4X9 2439 aa5.7□□□□□ -1.5
CTNND1-231ENST00000532463 CSPG4Q6UVK1 2322 aa5.7□□□□□ -1.5
CTNND1-231ENST00000532463 MED12LQ86YW9 2145 aa5.7□□□□□ -1.5
CTNND1-231ENST00000532463 SONP18583 2426 aaKnown RBP5.7□□□□□ -1.5
CTNND1-231ENST00000532463 C2CD3Q4AC94 2353 aa5.7□□□□□ -1.5
CTNND1-231ENST00000532463 LINC00476Q8WZB0 136 aa5.69□□□□□ -1.5
CTNND1-231ENST00000532463 SPG11Q96JI7 2443 aa5.69□□□□□ -1.5
CTNND1-231ENST00000532463 PCDH15Q96QU1 1955 aa5.68□□□□□ -1.5
CTNND1-231ENST00000532463 TECTAO75443 2155 aa5.68□□□□□ -1.5
CTNND1-231ENST00000532463 IGLV1-40P01703 118 aa5.68□□□□□ -1.5
CTNND1-231ENST00000532463 SMCPP49901 116 aaPredicted RBP5.68□□□□□ -1.5
CTNND1-231ENST00000532463 ZNF462Q96JM2 2506 aa5.68□□□□□ -1.5
CTNND1-231ENST00000532463 TRBV7-4A0A0J9YYF1 115 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 Q96NJ1 140 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 MRPL34Q9BQ48 92 aaKnown RBP5.67□□□□□ -1.5
CTNND1-231ENST00000532463 CUL9Q8IWT3 2517 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 A8MWP4 228 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 BDP1A6H8Y1 2624 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 AGRNO00468 2067 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 A0A096LNJ9 63 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 ODF3L2Q3SX64 289 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 LINC00167Q96N53 147 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 IGLV5-39A0A0G2JS06 123 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 LY6G6DO95868 133 aa5.67□□□□□ -1.5
CTNND1-231ENST00000532463 PRO3102Q9H379 93 aa5.66□□□□□ -1.5
CTNND1-231ENST00000532463 LINC00483Q53H64 154 aa5.66□□□□□ -1.5
CTNND1-231ENST00000532463 TANC1Q9C0D5 1861 aa5.65□□□□□ -1.5
CTNND1-231ENST00000532463 Q1T7F1 81 aa5.65□□□□□ -1.5
CTNND1-231ENST00000532463 PRO0461Q9UI25 63 aa5.65□□□□□ -1.5
CTNND1-231ENST00000532463 A0A1W2PNU3 283 aaPredicted RBP5.65□□□□□ -1.51
CTNND1-231ENST00000532463 RPL37AP61513 92 aaKnown RBP5.65□□□□□ -1.51
CTNND1-231ENST00000532463 SRCAPQ6ZRS2 3230 aa5.65□□□□□ -1.51
CTNND1-231ENST00000532463 C18orf65Q6ZTR6 163 aa5.64□□□□□ -1.51
CTNND1-231ENST00000532463 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
CTNND1-231ENST00000532463 KLKP1Q107X0 134 aa5.64□□□□□ -1.51
CTNND1-231ENST00000532463 PCNX3Q9H6A9 2034 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms