RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 HUWE1Q7Z6Z7 4374 aaKnown RBP10.38□□□□□ -0.75
SRPRA-206ENST00000532259 RPL13AP40429 203 aaKnown RBP10.38□□□□□ -0.75
SRPRA-206ENST00000532259 HERV-K104P63124 156 aa10.38□□□□□ -0.75
SRPRA-206ENST00000532259 ETDBQ3ZM63 59 aa10.38□□□□□ -0.75
SRPRA-206ENST00000532259 TRIAP1O43715 76 aa10.37□□□□□ -0.75
SRPRA-206ENST00000532259 IFITM1P13164 125 aa10.37□□□□□ -0.75
SRPRA-206ENST00000532259 COL7A1Q02388 2944 aa10.37□□□□□ -0.75
SRPRA-206ENST00000532259 K7EIL1 84 aa10.36□□□□□ -0.75
SRPRA-206ENST00000532259 WFDC10BQ8IUB3 73 aa10.36□□□□□ -0.75
SRPRA-206ENST00000532259 C11orf45Q8TAV5 145 aa10.36□□□□□ -0.75
SRPRA-206ENST00000532259 LINC00526Q96FQ7 95 aa10.36□□□□□ -0.75
SRPRA-206ENST00000532259 TEX48A0A1B0GUV7 120 aa10.36□□□□□ -0.75
SRPRA-206ENST00000532259 PRO0461Q9UI25 63 aa10.36□□□□□ -0.75
SRPRA-206ENST00000532259 MALP21145 153 aa10.35□□□□□ -0.75
SRPRA-206ENST00000532259 F8W1H4 67 aa10.35□□□□□ -0.75
SRPRA-206ENST00000532259 COX7A2LO14548 114 aa10.35□□□□□ -0.75
SRPRA-206ENST00000532259 DEFB131BA0A096LNP1 70 aa10.34□□□□□ -0.75
SRPRA-206ENST00000532259 CD164L2Q6UWJ8 174 aa10.34□□□□□ -0.75
SRPRA-206ENST00000532259 SMCPP49901 116 aaPredicted RBP10.34□□□□□ -0.75
SRPRA-206ENST00000532259 LYRM7Q5U5X0 104 aa10.33□□□□□ -0.76
SRPRA-206ENST00000532259 UBE2WQ96B02 151 aa10.33□□□□□ -0.76
SRPRA-206ENST00000532259 STAB2Q8WWQ8 2551 aa10.33□□□□□ -0.76
SRPRA-206ENST00000532259 GAGE12HA6NDE8 117 aa10.33□□□□□ -0.76
SRPRA-206ENST00000532259 CLEC2BQ92478 149 aa10.32□□□□□ -0.76
SRPRA-206ENST00000532259 K7ERU9 68 aa10.32□□□□□ -0.76
SRPRA-206ENST00000532259 CKS1BP61024 79 aa10.32□□□□□ -0.76
SRPRA-206ENST00000532259 C9orf116Q5BN46 136 aaPredicted RBP10.32□□□□□ -0.76
SRPRA-206ENST00000532259 ENHOQ6UWT2 76 aa10.32□□□□□ -0.76
SRPRA-206ENST00000532259 FOXI1Q12951 378 aa10.31□□□□□ -0.76
SRPRA-206ENST00000532259 ESRGQ1W209 222 aa10.31□□□□□ -0.76
SRPRA-206ENST00000532259 C6orf223Q8N319 242 aa10.31□□□□□ -0.76
SRPRA-206ENST00000532259 TRBV20-1A0A075B6N2 111 aa10.3□□□□□ -0.76
SRPRA-206ENST00000532259 C9JAW5 83 aa10.3□□□□□ -0.76
SRPRA-206ENST00000532259 VPS25Q9BRG1 176 aa10.3□□□□□ -0.76
SRPRA-206ENST00000532259 Q8IZM0 81 aa10.3□□□□□ -0.76
SRPRA-206ENST00000532259 SND1-IT1Q9HBX3 110 aa10.3□□□□□ -0.76
SRPRA-206ENST00000532259 CCL18P55774 89 aa10.29□□□□□ -0.76
SRPRA-206ENST00000532259 CFAP161Q6P656 301 aa10.29□□□□□ -0.76
SRPRA-206ENST00000532259 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
SRPRA-206ENST00000532259 CRPP02741 224 aa10.29□□□□□ -0.76
SRPRA-206ENST00000532259 KIAA0087Q14695 138 aa10.29□□□□□ -0.76
SRPRA-206ENST00000532259 IBA57-AS1B1ANH7 110 aa10.28□□□□□ -0.76
SRPRA-206ENST00000532259 COPS9Q8WXC6 57 aa10.27□□□□□ -0.77
SRPRA-206ENST00000532259 SPATA25Q9BR10 227 aa10.27□□□□□ -0.77
SRPRA-206ENST00000532259 TM2D3Q9BRN9 247 aa10.27□□□□□ -0.77
SRPRA-206ENST00000532259 LINC00337Q8N6G1 96 aa10.27□□□□□ -0.77
SRPRA-206ENST00000532259 PRR34Q9NV39 138 aa10.27□□□□□ -0.77
SRPRA-206ENST00000532259 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
SRPRA-206ENST00000532259 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
SRPRA-206ENST00000532259 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
SRPRA-206ENST00000532259 LYSTQ99698 3801 aa10.26□□□□□ -0.77
SRPRA-206ENST00000532259 H3BNG1 76 aa10.26□□□□□ -0.77
SRPRA-206ENST00000532259 COX6CP09669 75 aa10.26□□□□□ -0.77
SRPRA-206ENST00000532259 ATXN8Q156A1 80 aa10.26□□□□□ -0.77
SRPRA-206ENST00000532259 PRR3P79522 188 aaKnown RBP10.25□□□□□ -0.77
SRPRA-206ENST00000532259 SPAG11BQ08648 103 aa10.25□□□□□ -0.77
SRPRA-206ENST00000532259 UNQ6190/PRO20217Q6UXQ8 127 aa10.25□□□□□ -0.77
SRPRA-206ENST00000532259 SLC25A20O43772 301 aa10.25□□□□□ -0.77
SRPRA-206ENST00000532259 LINC01620Q4KN68 170 aa10.24□□□□□ -0.77
SRPRA-206ENST00000532259 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
SRPRA-206ENST00000532259 OR13C6PQ8NH95 151 aa10.23□□□□□ -0.77
SRPRA-206ENST00000532259 ANKRD29Q8N6D5 301 aa10.22□□□□□ -0.77
SRPRA-206ENST00000532259 DNAH9Q9NYC9 4486 aa10.22□□□□□ -0.77
SRPRA-206ENST00000532259 TENM2Q9NT68 2774 aa10.22□□□□□ -0.77
SRPRA-206ENST00000532259 Q9HAA7 133 aa10.22□□□□□ -0.77
SRPRA-206ENST00000532259 LINC01561Q8N1V8 128 aa10.21□□□□□ -0.77
SRPRA-206ENST00000532259 TRAV13-2A0A0B4J235 113 aa10.19□□□□□ -0.78
SRPRA-206ENST00000532259 TRAV10A0A0B4J240 114 aa10.19□□□□□ -0.78
SRPRA-206ENST00000532259 KLK5Q9Y337 293 aaPredicted RBP10.19□□□□□ -0.78
SRPRA-206ENST00000532259 LST1O00453 97 aa10.18□□□□□ -0.78
SRPRA-206ENST00000532259 CARD19Q96LW7 228 aa10.18□□□□□ -0.78
SRPRA-206ENST00000532259 IGKV2D-24A0A075B6R9 120 aa10.18□□□□□ -0.78
SRPRA-206ENST00000532259 TEN1Q86WV5 123 aa10.18□□□□□ -0.78
SRPRA-206ENST00000532259 SMIM11BQ8TCY0 68 aa10.18□□□□□ -0.78
SRPRA-206ENST00000532259 FAM218AQ96MZ4 157 aa10.18□□□□□ -0.78
SRPRA-206ENST00000532259 DNHD1Q96M86 4753 aa10.17□□□□□ -0.78
SRPRA-206ENST00000532259 CXCL5P42830 114 aa10.17□□□□□ -0.78
SRPRA-206ENST00000532259 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
SRPRA-206ENST00000532259 KRTAP26-1Q6PEX3 210 aa10.17□□□□□ -0.78
SRPRA-206ENST00000532259 Q8NDZ9 215 aa10.17□□□□□ -0.78
SRPRA-206ENST00000532259 NTN5Q8WTR8 489 aaPredicted RBP10.17□□□□□ -0.78
SRPRA-206ENST00000532259 TRBV10-2A0A0K0K1G8 114 aa10.16□□□□□ -0.78
SRPRA-206ENST00000532259 CBY1Q9Y3M2 126 aa10.16□□□□□ -0.78
SRPRA-206ENST00000532259 LINC00588Q9Y4M8 146 aa10.16□□□□□ -0.78
SRPRA-206ENST00000532259 CSMD3Q7Z407 3707 aa10.15□□□□□ -0.78
SRPRA-206ENST00000532259 NCR3O14931 201 aa10.15□□□□□ -0.78
SRPRA-206ENST00000532259 C1orf43Q9BWL3 253 aa10.15□□□□□ -0.78
SRPRA-206ENST00000532259 TEX49A0A1B0GTD5 131 aa10.15□□□□□ -0.78
SRPRA-206ENST00000532259 J3QR89 54 aa10.14□□□□□ -0.79
SRPRA-206ENST00000532259 ZNF561-AS1K7EIQ3 104 aa10.14□□□□□ -0.79
SRPRA-206ENST00000532259 LINC01556Q5JQF7 62 aa10.14□□□□□ -0.79
SRPRA-206ENST00000532259 XAGE1AQ9HD64 81 aa10.14□□□□□ -0.79
SRPRA-206ENST00000532259 C6orf48Q9UBA6 75 aa10.14□□□□□ -0.79
SRPRA-206ENST00000532259 COX17Q14061 63 aa10.13□□□□□ -0.79
SRPRA-206ENST00000532259 PPDPFLQ8WWR9 84 aa10.13□□□□□ -0.79
SRPRA-206ENST00000532259 RPL28P46779 137 aaKnown RBP10.12□□□□□ -0.79
SRPRA-206ENST00000532259 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
SRPRA-206ENST00000532259 PPDPFQ9H3Y8 114 aa10.12□□□□□ -0.79
SRPRA-206ENST00000532259 PRKDCP78527 4128 aaKnown RBP10.12□□□□□ -0.79
SRPRA-206ENST00000532259 C15orf56Q8N910 161 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms